EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000054873 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 970 bases
Position: chr7:17276950-17277919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000062711	RRM_1	PF00076.22	1.3e-30	1	2
ENSBTAP00000062711	RRM_1	PF00076.22	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000076478	-	696	-	ENSBTAP00000062711	231 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000054873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000054873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000054873	-	72	67.857	ENSBTAG00000054428	-	92	67.857
ENSBTAG00000054873	-	81	70.588	ENSBTAG00000038680	-	50	70.588
ENSBTAG00000054873	-	78	66.667	ENSBTAG00000006815	-	56	67.039
ENSBTAG00000054873	-	74	65.934	ENSBTAG00000052568	-	73	65.934
ENSBTAG00000054873	-	75	79.508	ENSBTAG00000051697	-	51	79.508
ENSBTAG00000054873	-	73	40.782	ENSBTAG00000019714	DAZAP1	51	40.782
ENSBTAG00000054873	-	54	30.400	ENSBTAG00000000423	RBM4B	50	30.400
ENSBTAG00000054873	-	73	39.157	ENSBTAG00000004406	MSI2	53	39.157
ENSBTAG00000054873	-	75	59.770	ENSBTAG00000048345	-	65	59.770
ENSBTAG00000054873	-	78	68.333	ENSBTAG00000001553	HNRNPA1	58	68.333
ENSBTAG00000054873	-	74	54.070	ENSBTAG00000016929	HNRNPA0	56	54.438
ENSBTAG00000054873	-	67	37.313	ENSBTAG00000025848	RBM3	70	40.000
ENSBTAG00000054873	-	75	68.966	ENSBTAG00000045937	-	52	67.598
ENSBTAG00000054873	-	87	80.447	ENSBTAG00000005726	HNRNPA2B1	59	80.447
ENSBTAG00000054873	-	75	76.301	ENSBTAG00000011195	-	50	74.719
ENSBTAG00000054873	-	75	60.920	ENSBTAG00000052891	-	61	61.988
ENSBTAG00000054873	-	73	41.566	ENSBTAG00000009800	MSI1	54	41.212
ENSBTAG00000054873	-	77	42.690	ENSBTAG00000013952	HNRNPD	65	42.690
ENSBTAG00000054873	-	78	65.000	ENSBTAG00000021755	-	58	65.000
ENSBTAG00000054873	-	78	40.000	ENSBTAG00000013627	HNRNPAB	62	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000054873	-	99	71.255	ENSG00000122566	HNRNPA2B1	95	71.255	Homo_sapiens
ENSBTAG00000054873	-	87	80.447	ENSAMEG00000005983	HNRNPA2B1	52	80.447	Ailuropoda_melanoleuca
ENSBTAG00000054873	-	87	79.888	ENSAPLG00000012019	HNRNPA2B1	51	79.888	Anas_platyrhynchos
ENSBTAG00000054873	-	92	79.330	ENSACAG00000012992	HNRNPA2B1	54	79.330	Anolis_carolinensis
ENSBTAG00000054873	-	99	72.541	ENSANAG00000033016	HNRNPA2B1	95	72.541	Aotus_nancymaae
ENSBTAG00000054873	-	86	80.337	ENSANAG00000020524	-	60	79.006	Aotus_nancymaae
ENSBTAG00000054873	-	75	80.576	ENSCJAG00000047538	-	51	80.576	Callithrix_jacchus
ENSBTAG00000054873	-	92	82.659	ENSCJAG00000007908	HNRNPA2B1	95	71.660	Callithrix_jacchus
ENSBTAG00000054873	-	87	80.447	ENSCAFG00000002885	HNRNPA2B1	52	80.447	Canis_familiaris
ENSBTAG00000054873	-	87	80.447	ENSCAFG00020003488	HNRNPA2B1	53	80.110	Canis_lupus_dingo
ENSBTAG00000054873	-	75	76.301	ENSCHIG00000015804	-	53	74.719	Capra_hircus
ENSBTAG00000054873	-	77	74.586	ENSCHIG00000011148	-	53	74.586	Capra_hircus
ENSBTAG00000054873	-	79	73.224	ENSCHIG00000026095	-	62	66.029	Capra_hircus
ENSBTAG00000054873	-	75	77.457	ENSCHIG00000008431	-	71	77.457	Capra_hircus
ENSBTAG00000054873	-	77	91.620	ENSCHIG00000015823	-	55	91.620	Capra_hircus
ENSBTAG00000054873	-	92	80.447	ENSCHIG00000022444	HNRNPA2B1	55	80.447	Capra_hircus
ENSBTAG00000054873	-	92	82.659	ENSTSYG00000008124	HNRNPA2B1	95	70.040	Carlito_syrichta
ENSBTAG00000054873	-	87	80.447	ENSCPOG00000036630	HNRNPA2B1	53	80.110	Cavia_porcellus
ENSBTAG00000054873	-	99	72.131	ENSCCAG00000029074	HNRNPA2B1	95	71.660	Cebus_capucinus
ENSBTAG00000054873	-	99	72.541	ENSCATG00000033325	HNRNPA2B1	95	71.660	Cercocebus_atys
ENSBTAG00000054873	-	93	74.286	ENSCLAG00000016182	-	50	75.000	Chinchilla_lanigera
ENSBTAG00000054873	-	87	80.447	ENSCLAG00000014058	HNRNPA2B1	60	80.110	Chinchilla_lanigera
ENSBTAG00000054873	-	87	78.453	ENSCSAG00000005140	-	61	78.453	Chlorocebus_sabaeus
ENSBTAG00000054873	-	87	80.447	ENSCSAG00000014175	HNRNPA2B1	52	80.447	Chlorocebus_sabaeus
ENSBTAG00000054873	-	87	79.888	ENSCHOG00000013832	HNRNPA2B1	53	79.888	Choloepus_hoffmanni
ENSBTAG00000054873	-	87	80.447	ENSCPBG00000022485	HNRNPA2B1	58	80.447	Chrysemys_picta_bellii
ENSBTAG00000054873	-	99	71.660	ENSCANG00000028734	HNRNPA2B1	95	71.660	Colobus_angolensis_palliatus
ENSBTAG00000054873	-	80	53.261	ENSCGRG00001020496	-	92	51.515	Cricetulus_griseus_chok1gshd
ENSBTAG00000054873	-	87	80.447	ENSCGRG00001022416	-	60	80.110	Cricetulus_griseus_chok1gshd
ENSBTAG00000054873	-	87	80.447	ENSCGRG00000015964	-	60	80.447	Cricetulus_griseus_crigri
ENSBTAG00000054873	-	80	53.261	ENSCGRG00000010922	-	92	51.515	Cricetulus_griseus_crigri
ENSBTAG00000054873	-	87	80.447	ENSDNOG00000012928	-	51	80.447	Dasypus_novemcinctus
ENSBTAG00000054873	-	77	60.894	ENSDNOG00000043784	-	54	60.894	Dasypus_novemcinctus
ENSBTAG00000054873	-	87	80.447	ENSDORG00000005482	Hnrnpa2b1	60	80.110	Dipodomys_ordii
ENSBTAG00000054873	-	92	80.447	ENSETEG00000018577	HNRNPA2B1	53	80.447	Echinops_telfairi
ENSBTAG00000054873	-	99	71.660	ENSFCAG00000027765	HNRNPA2B1	95	72.065	Felis_catus
ENSBTAG00000054873	-	97	49.802	ENSFCAG00000036293	-	98	49.802	Felis_catus
ENSBTAG00000054873	-	87	79.330	ENSFALG00000009527	HNRNPA2B1	52	79.330	Ficedula_albicollis
ENSBTAG00000054873	-	87	80.447	ENSFDAG00000000793	HNRNPA2B1	60	80.110	Fukomys_damarensis
ENSBTAG00000054873	-	92	79.888	ENSGALG00000011036	HNRNPA2B1	77	79.888	Gallus_gallus
ENSBTAG00000054873	-	87	80.447	ENSGAGG00000006799	HNRNPA2B1	58	80.447	Gopherus_agassizii
ENSBTAG00000054873	-	99	71.255	ENSGGOG00000017072	HNRNPA2B1	95	71.255	Gorilla_gorilla
ENSBTAG00000054873	-	87	80.447	ENSHGLG00000015396	HNRNPA2B1	60	80.110	Heterocephalus_glaber_female
ENSBTAG00000054873	-	87	80.447	ENSHGLG00100004637	HNRNPA2B1	53	80.110	Heterocephalus_glaber_male
ENSBTAG00000054873	-	75	80.292	ENSSTOG00000024155	-	51	69.880	Ictidomys_tridecemlineatus
ENSBTAG00000054873	-	87	80.447	ENSSTOG00000006202	-	60	80.110	Ictidomys_tridecemlineatus
ENSBTAG00000054873	-	79	71.271	ENSSTOG00000026412	-	58	71.271	Ictidomys_tridecemlineatus
ENSBTAG00000054873	-	97	64.019	ENSSTOG00000034171	-	100	66.355	Ictidomys_tridecemlineatus
ENSBTAG00000054873	-	92	64.246	ENSSTOG00000025552	-	57	64.246	Ictidomys_tridecemlineatus
ENSBTAG00000054873	-	94	68.304	ENSSTOG00000029449	-	93	66.102	Ictidomys_tridecemlineatus
ENSBTAG00000054873	-	74	68.235	ENSJJAG00000018972	-	63	57.014	Jaculus_jaculus
ENSBTAG00000054873	-	87	72.928	ENSJJAG00000012306	-	59	72.928	Jaculus_jaculus
ENSBTAG00000054873	-	87	80.447	ENSJJAG00000000423	-	60	80.447	Jaculus_jaculus
ENSBTAG00000054873	-	99	62.903	ENSJJAG00000013880	-	97	62.903	Jaculus_jaculus
ENSBTAG00000054873	-	75	72.832	ENSJJAG00000023126	-	58	70.950	Jaculus_jaculus
ENSBTAG00000054873	-	78	66.138	ENSJJAG00000016790	-	53	66.138	Jaculus_jaculus
ENSBTAG00000054873	-	77	73.743	ENSJJAG00000022256	-	59	73.743	Jaculus_jaculus
ENSBTAG00000054873	-	87	80.447	ENSJJAG00000000278	-	50	80.447	Jaculus_jaculus
ENSBTAG00000054873	-	78	75.138	ENSLACG00000013590	HNRNPA2B1	61	75.843	Latimeria_chalumnae
ENSBTAG00000054873	-	87	80.447	ENSLAFG00000006902	HNRNPA2B1	65	81.395	Loxodonta_africana
ENSBTAG00000054873	-	92	80.447	ENSMFAG00000002536	HNRNPA2B1	95	71.660	Macaca_fascicularis
ENSBTAG00000054873	-	92	82.659	ENSMMUG00000003619	HNRNPA2B1	95	71.660	Macaca_mulatta
ENSBTAG00000054873	-	99	72.541	ENSMNEG00000029148	HNRNPA2B1	95	71.660	Macaca_nemestrina
ENSBTAG00000054873	-	92	82.659	ENSMLEG00000040848	HNRNPA2B1	95	71.660	Mandrillus_leucophaeus
ENSBTAG00000054873	-	87	79.888	ENSMGAG00000010635	HNRNPA2B1	53	79.888	Meleagris_gallopavo
ENSBTAG00000054873	-	87	80.447	ENSMAUG00000005706	-	60	80.110	Mesocricetus_auratus
ENSBTAG00000054873	-	86	81.657	ENSMAUG00000015003	-	57	81.657	Mesocricetus_auratus
ENSBTAG00000054873	-	99	62.551	ENSMICG00000002750	-	94	62.551	Microcebus_murinus
ENSBTAG00000054873	-	92	82.659	ENSMICG00000030570	HNRNPA2B1	95	71.660	Microcebus_murinus
ENSBTAG00000054873	-	87	75.460	ENSMOCG00000021250	-	53	75.460	Microtus_ochrogaster
ENSBTAG00000054873	-	87	80.447	ENSMOCG00000009258	-	60	80.110	Microtus_ochrogaster
ENSBTAG00000054873	-	87	82.911	MGP_CAROLIEiJ_G0028377	Hnrnpa2b1	72	82.911	Mus_caroli
ENSBTAG00000054873	-	87	80.447	ENSMUSG00000004980	Hnrnpa2b1	60	80.110	Mus_musculus
ENSBTAG00000054873	-	87	80.447	MGP_PahariEiJ_G0022127	Hnrnpa2b1	60	80.110	Mus_pahari
ENSBTAG00000054873	-	93	80.864	MGP_SPRETEiJ_G0029379	Hnrnpa2b1	76	78.571	Mus_spretus
ENSBTAG00000054873	-	87	80.447	ENSMPUG00000004554	HNRNPA2B1	52	80.447	Mustela_putorius_furo
ENSBTAG00000054873	-	87	80.110	ENSMPUG00000017012	-	60	80.110	Mustela_putorius_furo
ENSBTAG00000054873	-	100	44.697	ENSNGAG00000000224	-	100	44.318	Nannospalax_galili
ENSBTAG00000054873	-	99	56.148	ENSNGAG00000017267	-	82	56.148	Nannospalax_galili
ENSBTAG00000054873	-	87	80.447	ENSNGAG00000015156	-	60	80.110	Nannospalax_galili
ENSBTAG00000054873	-	92	82.659	ENSNLEG00000014918	HNRNPA2B1	95	71.255	Nomascus_leucogenys
ENSBTAG00000054873	-	87	79.888	ENSMEUG00000001084	HNRNPA2B1	53	79.888	Notamacropus_eugenii
ENSBTAG00000054873	-	87	79.006	ENSMEUG00000014479	-	63	79.006	Notamacropus_eugenii
ENSBTAG00000054873	-	99	60.996	ENSODEG00000005746	-	92	60.996	Octodon_degus
ENSBTAG00000054873	-	75	63.006	ENSODEG00000005464	-	51	61.798	Octodon_degus
ENSBTAG00000054873	-	82	54.190	ENSODEG00000009329	-	56	54.190	Octodon_degus
ENSBTAG00000054873	-	78	78.453	ENSODEG00000018537	-	53	78.453	Octodon_degus
ENSBTAG00000054873	-	87	80.447	ENSODEG00000008757	-	62	80.110	Octodon_degus
ENSBTAG00000054873	-	77	70.391	ENSODEG00000000652	-	54	70.391	Octodon_degus
ENSBTAG00000054873	-	87	80.447	ENSOCUG00000026859	HNRNPA2B1	52	80.447	Oryctolagus_cuniculus
ENSBTAG00000054873	-	87	80.447	ENSOGAG00000015353	HNRNPA2B1	52	80.447	Otolemur_garnettii
ENSBTAG00000054873	-	70	61.491	ENSOGAG00000031950	-	53	60.241	Otolemur_garnettii
ENSBTAG00000054873	-	77	93.296	ENSOARG00000001157	-	52	93.296	Ovis_aries
ENSBTAG00000054873	-	76	75.000	ENSOARG00000005535	-	51	75.000	Ovis_aries
ENSBTAG00000054873	-	81	72.193	ENSOARG00000016439	-	63	66.507	Ovis_aries
ENSBTAG00000054873	-	77	93.855	ENSOARG00000004416	-	52	93.855	Ovis_aries
ENSBTAG00000054873	-	87	80.447	ENSOARG00000010132	HNRNPA2B1	52	80.447	Ovis_aries
ENSBTAG00000054873	-	72	68.235	ENSOARG00000013811	-	76	68.235	Ovis_aries
ENSBTAG00000054873	-	81	71.658	ENSOARG00000003965	-	61	66.029	Ovis_aries
ENSBTAG00000054873	-	75	76.879	ENSOARG00000008025	-	66	76.879	Ovis_aries
ENSBTAG00000054873	-	99	72.131	ENSPPAG00000037520	HNRNPA2B1	95	72.131	Pan_paniscus
ENSBTAG00000054873	-	99	72.065	ENSPPRG00000019212	HNRNPA2B1	95	72.065	Panthera_pardus
ENSBTAG00000054873	-	74	64.118	ENSPTIG00000006805	-	59	64.118	Panthera_tigris_altaica
ENSBTAG00000054873	-	99	71.660	ENSPTIG00000019833	HNRNPA2B1	95	72.065	Panthera_tigris_altaica
ENSBTAG00000054873	-	99	72.131	ENSPTRG00000019002	HNRNPA2B1	95	71.255	Pan_troglodytes
ENSBTAG00000054873	-	92	80.447	ENSPANG00000021598	HNRNPA2B1	95	71.660	Papio_anubis
ENSBTAG00000054873	-	87	80.447	ENSPSIG00000002659	HNRNPA2B1	53	80.447	Pelodiscus_sinensis
ENSBTAG00000054873	-	87	80.447	ENSPEMG00000014384	Hnrnpa2b1	60	80.110	Peromyscus_maniculatus_bairdii
ENSBTAG00000054873	-	76	62.286	ENSPMAG00000008270	HNRNPA2B1	73	62.791	Petromyzon_marinus
ENSBTAG00000054873	-	75	72.832	ENSPCIG00000013729	HNRNPA2B1	58	70.950	Phascolarctos_cinereus
ENSBTAG00000054873	-	87	80.447	ENSPPYG00000017715	HNRNPA2B1	52	80.447	Pongo_abelii
ENSBTAG00000054873	-	75	82.081	ENSPCOG00000026324	HNRNPA2B1	75	82.081	Propithecus_coquereli
ENSBTAG00000054873	-	87	80.447	ENSPVAG00000006296	HNRNPA2B1	53	80.447	Pteropus_vampyrus
ENSBTAG00000054873	-	87	80.447	ENSRNOG00000011175	Hnrnpa2b1	60	79.558	Rattus_norvegicus
ENSBTAG00000054873	-	78	67.630	ENSRBIG00000039719	-	56	65.746	Rhinopithecus_bieti
ENSBTAG00000054873	-	92	82.659	ENSRBIG00000015923	-	93	72.131	Rhinopithecus_bieti
ENSBTAG00000054873	-	92	79.330	ENSRROG00000008368	-	53	79.330	Rhinopithecus_roxellana
ENSBTAG00000054873	-	99	72.131	ENSRROG00000020443	-	95	71.255	Rhinopithecus_roxellana
ENSBTAG00000054873	-	99	72.951	ENSSBOG00000005245	HNRNPA2B1	96	72.951	Saimiri_boliviensis_boliviensis
ENSBTAG00000054873	-	87	79.330	ENSSHAG00000017930	HNRNPA2B1	51	79.330	Sarcophilus_harrisii
ENSBTAG00000054873	-	92	79.330	ENSSPUG00000015955	HNRNPA2B1	58	79.330	Sphenodon_punctatus
ENSBTAG00000054873	-	79	68.000	ENSSSCG00000012503	-	55	68.000	Sus_scrofa
ENSBTAG00000054873	-	77	80.226	ENSSSCG00000013607	-	51	80.226	Sus_scrofa
ENSBTAG00000054873	-	87	80.447	ENSSSCG00000036350	HNRNPA2B1	60	80.447	Sus_scrofa
ENSBTAG00000054873	-	87	79.330	ENSTGUG00000002869	HNRNPA2B1	52	79.330	Taeniopygia_guttata
ENSBTAG00000054873	-	99	64.516	ENSTBEG00000003219	-	100	65.323	Tupaia_belangeri
ENSBTAG00000054873	-	87	80.447	ENSUAMG00000025628	HNRNPA2B1	60	80.110	Ursus_americanus
ENSBTAG00000054873	-	87	80.447	ENSUMAG00000001699	HNRNPA2B1	52	80.447	Ursus_maritimus
ENSBTAG00000054873	-	77	75.978	ENSVPAG00000010417	HNRNPA2B1	53	75.978	Vicugna_pacos
ENSBTAG00000054873	-	87	80.447	ENSVVUG00000000484	HNRNPA2B1	53	80.110	Vulpes_vulpes
ENSBTAG00000054873	-	81	75.401	ENSXETG00000012170	hnrnpa2b1	55	77.348	Xenopus_tropicalis