EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000055212 (Gene tree)
Gene ID: 526910
Gene Symbol: HTATSF1
Alias: -
Full Name: Bos taurus HIV-1 Tat specific factor 1 (HTATSF1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 17226 bases
Position: chrNKLS02002208.1:8402508-8419733
Accession: NM_001206414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060458	RRM_1	PF00076.22	9e-17	1	2
ENSBTAP00000060458	RRM_1	PF00076.22	9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000073091	-	3584	XM_024988371	ENSBTAP00000060458	773 (aa)	XP_024844139	UPI000207D9D9

Gene Model

Click here to download ENSBTAG00000055212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000055212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000055212	HTATSF1	100	86.693	ENSBTAG00000032711	HTATSF1	99	87.190
ENSBTAG00000055212	HTATSF1	100	100.000	ENSBTAG00000054942	HTATSF1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000055212	HTATSF1	99	79.948	ENSG00000102241	HTATSF1	100	91.393	Homo_sapiens
ENSBTAG00000055212	HTATSF1	53	61.882	ENSAPOG00000009823	htatsf1	92	60.142	Acanthochromis_polyacanthus
ENSBTAG00000055212	HTATSF1	99	83.095	ENSAMEG00000002921	HTATSF1	99	81.795	Ailuropoda_melanoleuca
ENSBTAG00000055212	HTATSF1	50	62.376	ENSATEG00000008903	htatsf1	89	60.794	Anabas_testudineus
ENSBTAG00000055212	HTATSF1	94	75.034	ENSANAG00000025458	-	99	75.069	Aotus_nancymaae
ENSBTAG00000055212	HTATSF1	95	68.065	ENSANAG00000027986	-	96	68.071	Aotus_nancymaae
ENSBTAG00000055212	HTATSF1	99	78.784	ENSCJAG00000003676	HTATSF1	99	78.023	Callithrix_jacchus
ENSBTAG00000055212	HTATSF1	99	82.338	ENSCAFG00000023294	HTATSF1	99	81.712	Canis_familiaris
ENSBTAG00000055212	HTATSF1	99	82.338	ENSCAFG00020024635	HTATSF1	99	81.712	Canis_lupus_dingo
ENSBTAG00000055212	HTATSF1	99	98.962	ENSCHIG00000000312	HTATSF1	99	98.962	Capra_hircus
ENSBTAG00000055212	HTATSF1	99	79.791	ENSTSYG00000028876	HTATSF1	99	80.339	Carlito_syrichta
ENSBTAG00000055212	HTATSF1	99	74.545	ENSCCAG00000025329	-	99	74.609	Cebus_capucinus
ENSBTAG00000055212	HTATSF1	99	78.859	ENSCCAG00000022701	-	99	79.297	Cebus_capucinus
ENSBTAG00000055212	HTATSF1	99	79.477	ENSCATG00000029963	HTATSF1	99	80.339	Cercocebus_atys
ENSBTAG00000055212	HTATSF1	99	71.722	ENSCLAG00000002718	HTATSF1	99	70.909	Chinchilla_lanigera
ENSBTAG00000055212	HTATSF1	99	79.608	ENSCSAG00000007505	HTATSF1	99	80.469	Chlorocebus_sabaeus
ENSBTAG00000055212	HTATSF1	99	79.477	ENSCANG00000028495	HTATSF1	99	80.339	Colobus_angolensis_palliatus
ENSBTAG00000055212	HTATSF1	99	74.619	ENSCGRG00001021602	Htatsf1	99	74.809	Cricetulus_griseus_chok1gshd
ENSBTAG00000055212	HTATSF1	91	68.690	ENSCGRG00000002085	Htatsf1	99	68.741	Cricetulus_griseus_crigri
ENSBTAG00000055212	HTATSF1	51	59.268	ENSDARG00000056649	htatsf1	89	59.268	Danio_rerio
ENSBTAG00000055212	HTATSF1	99	77.937	ENSDNOG00000002254	HTATSF1	99	77.937	Dasypus_novemcinctus
ENSBTAG00000055212	HTATSF1	90	43.447	ENSETEG00000006377	-	75	46.726	Echinops_telfairi
ENSBTAG00000055212	HTATSF1	99	82.920	ENSEASG00005003440	HTATSF1	99	84.355	Equus_asinus_asinus
ENSBTAG00000055212	HTATSF1	99	82.790	ENSECAG00000009156	HTATSF1	99	84.224	Equus_caballus
ENSBTAG00000055212	HTATSF1	99	71.206	ENSEEUG00000010668	HTATSF1	99	71.373	Erinaceus_europaeus
ENSBTAG00000055212	HTATSF1	100	81.935	ENSFCAG00000031924	HTATSF1	99	81.120	Felis_catus
ENSBTAG00000055212	HTATSF1	99	71.073	ENSFDAG00000008617	HTATSF1	99	71.708	Fukomys_damarensis
ENSBTAG00000055212	HTATSF1	52	65.468	ENSGALG00000006410	HTATSF1	90	64.976	Gallus_gallus
ENSBTAG00000055212	HTATSF1	99	79.818	ENSGGOG00000026072	HTATSF1	99	80.624	Gorilla_gorilla
ENSBTAG00000055212	HTATSF1	98	72.608	ENSHGLG00000005328	HTATSF1	99	70.947	Heterocephalus_glaber_female
ENSBTAG00000055212	HTATSF1	99	79.688	ENSSTOG00000012505	HTATSF1	98	77.474	Ictidomys_tridecemlineatus
ENSBTAG00000055212	HTATSF1	99	70.221	ENSLAFG00000014307	HTATSF1	99	70.611	Loxodonta_africana
ENSBTAG00000055212	HTATSF1	99	79.346	ENSMFAG00000044705	HTATSF1	99	80.208	Macaca_fascicularis
ENSBTAG00000055212	HTATSF1	99	79.346	ENSMMUG00000006450	HTATSF1	99	80.208	Macaca_mulatta
ENSBTAG00000055212	HTATSF1	99	74.510	ENSMNEG00000024084	HTATSF1	99	74.707	Macaca_nemestrina
ENSBTAG00000055212	HTATSF1	99	79.608	ENSMLEG00000035511	HTATSF1	99	80.469	Mandrillus_leucophaeus
ENSBTAG00000055212	HTATSF1	99	72.286	ENSMAUG00000007235	Htatsf1	99	70.988	Mesocricetus_auratus
ENSBTAG00000055212	HTATSF1	99	79.740	ENSMICG00000009348	HTATSF1	99	79.270	Microcebus_murinus
ENSBTAG00000055212	HTATSF1	99	71.186	ENSMOCG00000022370	-	95	69.361	Microtus_ochrogaster
ENSBTAG00000055212	HTATSF1	99	65.371	ENSMOCG00000023007	-	99	71.083	Microtus_ochrogaster
ENSBTAG00000055212	HTATSF1	51	62.864	ENSMMOG00000011013	htatsf1	90	62.044	Mola_mola
ENSBTAG00000055212	HTATSF1	50	62.255	ENSMALG00000019977	htatsf1	88	60.539	Monopterus_albus
ENSBTAG00000055212	HTATSF1	100	72.051	MGP_CAROLIEiJ_G0033094	Htatsf1	99	72.186	Mus_caroli
ENSBTAG00000055212	HTATSF1	98	72.585	ENSMUSG00000067873	Htatsf1	99	72.516	Mus_musculus
ENSBTAG00000055212	HTATSF1	98	72.585	MGP_SPRETEiJ_G0034249	Htatsf1	99	72.516	Mus_spretus
ENSBTAG00000055212	HTATSF1	99	82.603	ENSMPUG00000001901	HTATSF1	99	82.078	Mustela_putorius_furo
ENSBTAG00000055212	HTATSF1	99	75.979	ENSMLUG00000028418	-	99	75.979	Myotis_lucifugus
ENSBTAG00000055212	HTATSF1	99	70.795	ENSMLUG00000009234	-	98	68.020	Myotis_lucifugus
ENSBTAG00000055212	HTATSF1	98	74.474	ENSNGAG00000017831	Htatsf1	99	72.135	Nannospalax_galili
ENSBTAG00000055212	HTATSF1	99	79.531	ENSNLEG00000002746	HTATSF1	99	80.469	Nomascus_leucogenys
ENSBTAG00000055212	HTATSF1	99	76.227	ENSOCUG00000012570	HTATSF1	99	77.403	Oryctolagus_cuniculus
ENSBTAG00000055212	HTATSF1	98	75.885	ENSOGAG00000005565	HTATSF1	99	75.875	Otolemur_garnettii
ENSBTAG00000055212	HTATSF1	99	90.803	ENSOARG00000000481	-	99	90.980	Ovis_aries
ENSBTAG00000055212	HTATSF1	99	98.833	ENSOARG00000011215	-	99	98.833	Ovis_aries
ENSBTAG00000055212	HTATSF1	99	79.948	ENSPPAG00000024268	HTATSF1	99	80.754	Pan_paniscus
ENSBTAG00000055212	HTATSF1	100	80.774	ENSPPRG00000014209	HTATSF1	99	79.948	Panthera_pardus
ENSBTAG00000055212	HTATSF1	93	79.861	ENSPTIG00000016887	HTATSF1	95	78.962	Panthera_tigris_altaica
ENSBTAG00000055212	HTATSF1	99	79.948	ENSPTRG00000044591	HTATSF1	99	80.754	Pan_troglodytes
ENSBTAG00000055212	HTATSF1	99	68.188	ENSPANG00000010946	HTATSF1	99	84.615	Papio_anubis
ENSBTAG00000055212	HTATSF1	51	61.111	ENSPMGG00000006172	htatsf1	94	57.968	Periophthalmus_magnuspinnatus
ENSBTAG00000055212	HTATSF1	98	72.751	ENSPEMG00000022397	Htatsf1	99	73.256	Peromyscus_maniculatus_bairdii
ENSBTAG00000055212	HTATSF1	54	62.857	ENSPCIG00000018896	-	90	62.857	Phascolarctos_cinereus
ENSBTAG00000055212	HTATSF1	50	64.039	ENSPFOG00000007871	htatsf1	86	63.547	Poecilia_formosa
ENSBTAG00000055212	HTATSF1	50	63.547	ENSPLAG00000007532	htatsf1	89	63.054	Poecilia_latipinna
ENSBTAG00000055212	HTATSF1	50	64.039	ENSPMEG00000000352	htatsf1	89	63.793	Poecilia_mexicana
ENSBTAG00000055212	HTATSF1	85	80.699	ENSPPYG00000020765	HTATSF1	82	81.005	Pongo_abelii
ENSBTAG00000055212	HTATSF1	98	67.593	ENSPCAG00000010576	HTATSF1	99	64.910	Procavia_capensis
ENSBTAG00000055212	HTATSF1	99	80.884	ENSPCOG00000021823	HTATSF1	99	80.261	Propithecus_coquereli
ENSBTAG00000055212	HTATSF1	99	74.541	ENSPVAG00000010281	HTATSF1	99	74.541	Pteropus_vampyrus
ENSBTAG00000055212	HTATSF1	100	74.522	ENSRNOG00000027761	Htatsf1	99	74.679	Rattus_norvegicus
ENSBTAG00000055212	HTATSF1	99	69.281	ENSRBIG00000035486	HTATSF1	99	70.052	Rhinopithecus_bieti
ENSBTAG00000055212	HTATSF1	99	79.085	ENSRROG00000021939	HTATSF1	99	79.948	Rhinopithecus_roxellana
ENSBTAG00000055212	HTATSF1	99	75.683	ENSSBOG00000017914	-	99	76.271	Saimiri_boliviensis_boliviensis
ENSBTAG00000055212	HTATSF1	99	77.516	ENSSBOG00000027186	-	99	77.995	Saimiri_boliviensis_boliviensis
ENSBTAG00000055212	HTATSF1	50	68.475	ENSSHAG00000006440	-	99	68.475	Sarcophilus_harrisii
ENSBTAG00000055212	HTATSF1	51	61.298	ENSSLDG00000016880	htatsf1	94	58.891	Seriola_lalandi_dorsalis
ENSBTAG00000055212	HTATSF1	99	64.645	ENSSARG00000005193	HTATSF1	98	64.026	Sorex_araneus
ENSBTAG00000055212	HTATSF1	50	63.930	ENSSPAG00000000732	htatsf1	89	60.964	Stegastes_partitus
ENSBTAG00000055212	HTATSF1	99	78.312	ENSSSCG00000023062	HTATSF1	98	78.961	Sus_scrofa
ENSBTAG00000055212	HTATSF1	50	64.428	ENSTNIG00000016140	htatsf1	88	62.935	Tetraodon_nigroviridis
ENSBTAG00000055212	HTATSF1	85	76.292	ENSTTRG00000002269	HTATSF1	93	76.849	Tursiops_truncatus
ENSBTAG00000055212	HTATSF1	99	81.701	ENSUAMG00000012048	HTATSF1	99	80.624	Ursus_americanus
ENSBTAG00000055212	HTATSF1	99	83.634	ENSUMAG00000010393	HTATSF1	99	82.575	Ursus_maritimus
ENSBTAG00000055212	HTATSF1	91	81.215	ENSVPAG00000004569	HTATSF1	99	81.215	Vicugna_pacos
ENSBTAG00000055212	HTATSF1	99	82.208	ENSVVUG00000024802	HTATSF1	99	81.582	Vulpes_vulpes