EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000055300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 9158 bases
Position: chr13:73322026-73331183
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000064424	RRM_1	PF00076.22	2.3e-44	1	2
ENSBTAP00000064424	RRM_1	PF00076.22	2.3e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000055300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000055300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000055300	-	95	64.286	ENSBTAG00000019942	PABPC5	93	63.975
ENSBTAG00000055300	-	92	35.294	ENSBTAG00000014412	ELAVL3	61	35.294
ENSBTAG00000055300	-	96	36.765	ENSBTAG00000046348	ELAVL2	85	30.263
ENSBTAG00000055300	-	99	74.850	ENSBTAG00000048536	-	93	74.850
ENSBTAG00000055300	-	99	75.000	ENSBTAG00000050902	-	80	75.000
ENSBTAG00000055300	-	96	68.354	ENSBTAG00000046902	PABPC4L	90	68.354
ENSBTAG00000055300	-	93	30.921	ENSBTAG00000000613	ELAVL1	90	30.921
ENSBTAG00000055300	-	97	75.460	ENSBTAG00000052491	-	77	75.460
ENSBTAG00000055300	-	95	32.653	ENSBTAG00000016849	PABPC1L	57	32.653
ENSBTAG00000055300	-	86	43.056	ENSBTAG00000025848	RBM3	87	45.312
ENSBTAG00000055300	-	100	84.524	ENSBTAG00000017125	PABPC4	60	84.524
ENSBTAG00000055300	-	94	31.875	ENSBTAG00000004080	TIAL1	70	32.099
ENSBTAG00000055300	-	93	36.765	ENSBTAG00000021046	ELAVL4	61	36.765
ENSBTAG00000055300	-	93	31.496	ENSBTAG00000008937	CELF2	59	32.000
ENSBTAG00000055300	-	50	32.143	ENSBTAG00000008873	NCBP2	52	32.143
ENSBTAG00000055300	-	93	32.716	ENSBTAG00000019182	TIA1	70	32.716
ENSBTAG00000055300	-	100	86.905	ENSBTAG00000046358	PABPC1	56	86.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000055300	-	100	96.429	ENSG00000101104	PABPC1L	98	96.429	Homo_sapiens
ENSBTAG00000055300	-	100	86.310	ENSAPOG00000010842	pabpc1l	59	86.310	Acanthochromis_polyacanthus
ENSBTAG00000055300	-	100	97.024	ENSAMEG00000004099	PABPC1L	57	97.024	Ailuropoda_melanoleuca
ENSBTAG00000055300	-	100	86.905	ENSACIG00000021004	-	72	86.014	Amphilophus_citrinellus
ENSBTAG00000055300	-	100	86.310	ENSAOCG00000006167	-	59	86.310	Amphiprion_ocellaris
ENSBTAG00000055300	-	100	86.585	ENSAPEG00000010558	-	82	86.585	Amphiprion_percula
ENSBTAG00000055300	-	100	87.500	ENSATEG00000007428	pabpc1l	63	87.500	Anabas_testudineus
ENSBTAG00000055300	-	96	89.937	ENSAPLG00000008415	PABPC1L	58	88.024	Anas_platyrhynchos
ENSBTAG00000055300	-	100	94.643	ENSACAG00000011841	PABPC1L	54	94.643	Anolis_carolinensis
ENSBTAG00000055300	-	100	95.238	ENSANAG00000026826	PABPC1L	59	95.238	Aotus_nancymaae
ENSBTAG00000055300	-	100	86.905	ENSACLG00000024791	pabpc1l	64	86.905	Astatotilapia_calliptera
ENSBTAG00000055300	-	100	87.500	ENSAMXG00000013552	pabpc1l	54	87.500	Astyanax_mexicanus
ENSBTAG00000055300	-	100	78.363	ENSCJAG00000038506	-	98	78.363	Callithrix_jacchus
ENSBTAG00000055300	-	100	95.238	ENSCJAG00000017628	PABPC1L	59	95.238	Callithrix_jacchus
ENSBTAG00000055300	-	100	97.619	ENSCAFG00000009573	PABPC1L	56	97.619	Canis_familiaris
ENSBTAG00000055300	-	100	97.619	ENSCAFG00020013828	PABPC1L	59	97.619	Canis_lupus_dingo
ENSBTAG00000055300	-	100	100.000	ENSCHIG00000025759	PABPC1L	56	100.000	Capra_hircus
ENSBTAG00000055300	-	100	95.238	ENSTSYG00000006645	PABPC1L	63	95.238	Carlito_syrichta
ENSBTAG00000055300	-	95	93.878	ENSCAPG00000014519	PABPC1L	55	93.878	Cavia_aperea
ENSBTAG00000055300	-	100	92.857	ENSCPOG00000013633	PABPC1L	55	92.857	Cavia_porcellus
ENSBTAG00000055300	-	100	95.238	ENSCCAG00000023338	PABPC1L	59	95.238	Cebus_capucinus
ENSBTAG00000055300	-	100	97.024	ENSCATG00000034065	PABPC1L	59	97.024	Cercocebus_atys
ENSBTAG00000055300	-	100	91.667	ENSCLAG00000005298	PABPC1L	55	91.667	Chinchilla_lanigera
ENSBTAG00000055300	-	100	96.429	ENSCSAG00000014242	PABPC1L	59	96.429	Chlorocebus_sabaeus
ENSBTAG00000055300	-	100	94.048	ENSCPBG00000017755	-	87	94.048	Chrysemys_picta_bellii
ENSBTAG00000055300	-	71	85.714	ENSCPBG00000007810	-	73	85.714	Chrysemys_picta_bellii
ENSBTAG00000055300	-	100	77.326	ENSCSAVG00000003102	-	100	80.537	Ciona_savignyi
ENSBTAG00000055300	-	100	81.176	ENSCSAVG00000004246	-	61	83.226	Ciona_savignyi
ENSBTAG00000055300	-	100	97.024	ENSCANG00000037530	PABPC1L	59	97.024	Colobus_angolensis_palliatus
ENSBTAG00000055300	-	100	87.500	ENSCGRG00001021938	Pabpc1l	59	87.500	Cricetulus_griseus_chok1gshd
ENSBTAG00000055300	-	100	87.500	ENSCGRG00000007946	Pabpc1l	59	87.500	Cricetulus_griseus_crigri
ENSBTAG00000055300	-	98	84.848	ENSCSEG00000021295	pabpc1l	74	84.848	Cynoglossus_semilaevis
ENSBTAG00000055300	-	100	86.905	ENSCVAG00000015943	-	99	79.470	Cyprinodon_variegatus
ENSBTAG00000055300	-	100	86.905	ENSDARG00000002597	pabpc1l	88	88.462	Danio_rerio
ENSBTAG00000055300	-	100	97.024	ENSDNOG00000048450	PABPC1L	59	97.024	Dasypus_novemcinctus
ENSBTAG00000055300	-	100	94.643	ENSDORG00000001067	Pabpc1l	60	94.643	Dipodomys_ordii
ENSBTAG00000055300	-	100	97.024	ENSEASG00005023408	-	100	97.024	Equus_asinus_asinus
ENSBTAG00000055300	-	93	32.450	ENSECAG00000040139	-	54	32.450	Equus_caballus
ENSBTAG00000055300	-	100	92.857	ENSEEUG00000005978	PABPC1L	60	92.857	Erinaceus_europaeus
ENSBTAG00000055300	-	100	87.500	ENSELUG00000001811	pabpc1l	65	87.500	Esox_lucius
ENSBTAG00000055300	-	100	97.619	ENSFCAG00000011692	PABPC1L	59	97.619	Felis_catus
ENSBTAG00000055300	-	100	94.048	ENSFALG00000005372	PABPC1L	65	94.048	Ficedula_albicollis
ENSBTAG00000055300	-	100	93.452	ENSFDAG00000008291	PABPC1L	57	93.452	Fukomys_damarensis
ENSBTAG00000055300	-	100	87.500	ENSFHEG00000003398	pabpc1l	60	87.500	Fundulus_heteroclitus
ENSBTAG00000055300	-	100	86.905	ENSGMOG00000004437	pabpc1l	59	86.905	Gadus_morhua
ENSBTAG00000055300	-	100	92.857	ENSGALG00000004123	PABPC1L	92	92.857	Gallus_gallus
ENSBTAG00000055300	-	100	87.500	ENSGAFG00000021057	pabpc1l	64	87.500	Gambusia_affinis
ENSBTAG00000055300	-	100	88.095	ENSGACG00000002792	pabpc1l	62	88.095	Gasterosteus_aculeatus
ENSBTAG00000055300	-	100	94.048	ENSGAGG00000000589	PABPC1L	70	94.048	Gopherus_agassizii
ENSBTAG00000055300	-	100	96.429	ENSGGOG00000004584	PABPC1L	59	96.429	Gorilla_gorilla
ENSBTAG00000055300	-	100	86.905	ENSHBUG00000006134	pabpc1l	68	86.905	Haplochromis_burtoni
ENSBTAG00000055300	-	100	93.452	ENSHGLG00000008434	PABPC1L	55	93.452	Heterocephalus_glaber_female
ENSBTAG00000055300	-	100	93.452	ENSHGLG00100012151	PABPC1L	55	93.452	Heterocephalus_glaber_male
ENSBTAG00000055300	-	100	84.524	ENSHGLG00100019506	-	94	84.524	Heterocephalus_glaber_male
ENSBTAG00000055300	-	100	86.905	ENSHCOG00000009270	pabpc1l	68	86.905	Hippocampus_comes
ENSBTAG00000055300	-	94	61.392	ENSIPUG00000006760	-	79	61.392	Ictalurus_punctatus
ENSBTAG00000055300	-	94	61.392	ENSIPUG00000006780	-	77	61.392	Ictalurus_punctatus
ENSBTAG00000055300	-	77	63.846	ENSIPUG00000005537	-	100	63.846	Ictalurus_punctatus
ENSBTAG00000055300	-	100	86.905	ENSIPUG00000012602	pabpc1l	59	86.905	Ictalurus_punctatus
ENSBTAG00000055300	-	100	95.833	ENSSTOG00000003739	PABPC1L	59	95.833	Ictidomys_tridecemlineatus
ENSBTAG00000055300	-	99	48.969	ENSJJAG00000022406	Pabpc1l	54	48.969	Jaculus_jaculus
ENSBTAG00000055300	-	100	86.905	ENSKMAG00000016847	pabpc1l	68	86.905	Kryptolebias_marmoratus
ENSBTAG00000055300	-	100	86.905	ENSLBEG00000010084	pabpc1l	64	86.905	Labrus_bergylta
ENSBTAG00000055300	-	100	91.667	ENSLACG00000005762	PABPC1L	67	91.667	Latimeria_chalumnae
ENSBTAG00000055300	-	100	88.690	ENSLOCG00000007519	pabpc1l	61	88.690	Lepisosteus_oculatus
ENSBTAG00000055300	-	100	97.619	ENSLAFG00000003553	PABPC1L	58	97.619	Loxodonta_africana
ENSBTAG00000055300	-	100	97.024	ENSMFAG00000040365	PABPC1L	59	97.024	Macaca_fascicularis
ENSBTAG00000055300	-	100	97.024	ENSMNEG00000032298	PABPC1L	59	97.024	Macaca_nemestrina
ENSBTAG00000055300	-	100	97.024	ENSMLEG00000043139	PABPC1L	59	97.024	Mandrillus_leucophaeus
ENSBTAG00000055300	-	100	84.524	ENSMAMG00000011854	pabpc1l	63	84.524	Mastacembelus_armatus
ENSBTAG00000055300	-	100	86.905	ENSMZEG00005023713	pabpc1l	64	86.905	Maylandia_zebra
ENSBTAG00000055300	-	100	92.857	ENSMGAG00000003674	PABPC1L	58	92.857	Meleagris_gallopavo
ENSBTAG00000055300	-	100	88.690	ENSMOCG00000013186	Pabpc1l	59	88.690	Microtus_ochrogaster
ENSBTAG00000055300	-	100	86.905	ENSMMOG00000020574	-	90	88.462	Mola_mola
ENSBTAG00000055300	-	100	94.643	ENSMODG00000016198	PABPC1L	61	94.643	Monodelphis_domestica
ENSBTAG00000055300	-	100	85.119	ENSMALG00000021622	pabpc1l	64	85.119	Monopterus_albus
ENSBTAG00000055300	-	100	88.095	MGP_CAROLIEiJ_G0024627	Pabpc1l	59	88.095	Mus_caroli
ENSBTAG00000055300	-	100	88.095	ENSMUSG00000054582	Pabpc1l	59	88.095	Mus_musculus
ENSBTAG00000055300	-	100	87.500	MGP_PahariEiJ_G0026071	Pabpc1l	59	87.500	Mus_pahari
ENSBTAG00000055300	-	100	88.095	MGP_SPRETEiJ_G0025549	Pabpc1l	59	88.095	Mus_spretus
ENSBTAG00000055300	-	100	97.619	ENSMPUG00000017646	PABPC1L	58	97.619	Mustela_putorius_furo
ENSBTAG00000055300	-	100	93.452	ENSMLUG00000006324	PABPC1L	58	93.452	Myotis_lucifugus
ENSBTAG00000055300	-	100	89.881	ENSNGAG00000010458	Pabpc1l	59	89.881	Nannospalax_galili
ENSBTAG00000055300	-	100	86.905	ENSNBRG00000016633	pabpc1l	72	86.014	Neolamprologus_brichardi
ENSBTAG00000055300	-	100	91.667	ENSMEUG00000007905	-	59	91.667	Notamacropus_eugenii
ENSBTAG00000055300	-	100	95.833	ENSOPRG00000011846	PABPC1L	56	95.833	Ochotona_princeps
ENSBTAG00000055300	-	95	76.875	ENSODEG00000002920	-	96	76.875	Octodon_degus
ENSBTAG00000055300	-	100	94.048	ENSODEG00000015482	PABPC1L	63	94.048	Octodon_degus
ENSBTAG00000055300	-	100	86.905	ENSONIG00000017314	pabpc1l	62	86.905	Oreochromis_niloticus
ENSBTAG00000055300	-	100	93.413	ENSOANG00000015793	-	56	93.413	Ornithorhynchus_anatinus
ENSBTAG00000055300	-	100	95.238	ENSOCUG00000003005	PABPC1L	56	95.238	Oryctolagus_cuniculus
ENSBTAG00000055300	-	100	87.500	ENSORLG00000010322	pabpc1l	73	86.713	Oryzias_latipes
ENSBTAG00000055300	-	100	87.500	ENSORLG00020021193	pabpc1l	73	86.713	Oryzias_latipes_hni
ENSBTAG00000055300	-	100	87.500	ENSORLG00015017018	pabpc1l	73	86.713	Oryzias_latipes_hsok
ENSBTAG00000055300	-	100	88.095	ENSOMEG00000010789	pabpc1l	63	88.095	Oryzias_melastigma
ENSBTAG00000055300	-	100	93.452	ENSOGAG00000032999	PABPC1L	58	93.452	Otolemur_garnettii
ENSBTAG00000055300	-	100	99.405	ENSOARG00000004578	PABPC1L	59	99.405	Ovis_aries
ENSBTAG00000055300	-	100	96.429	ENSPPAG00000039677	PABPC1L	59	96.429	Pan_paniscus
ENSBTAG00000055300	-	100	97.619	ENSPPRG00000019327	-	88	97.619	Panthera_pardus
ENSBTAG00000055300	-	96	97.531	ENSPTIG00000006524	PABPC1L	59	97.531	Panthera_tigris_altaica
ENSBTAG00000055300	-	100	96.429	ENSPTRG00000013531	PABPC1L	98	96.429	Pan_troglodytes
ENSBTAG00000055300	-	100	97.024	ENSPANG00000018788	PABPC1L	59	97.024	Papio_anubis
ENSBTAG00000055300	-	54	68.889	ENSPKIG00000016801	-	100	68.889	Paramormyrops_kingsleyae
ENSBTAG00000055300	-	78	83.969	ENSPKIG00000016810	-	92	83.969	Paramormyrops_kingsleyae
ENSBTAG00000055300	-	100	85.119	ENSPKIG00000007322	pabpc1l	68	85.119	Paramormyrops_kingsleyae
ENSBTAG00000055300	-	100	94.048	ENSPSIG00000013289	PABPC1L	91	94.048	Pelodiscus_sinensis
ENSBTAG00000055300	-	100	86.905	ENSPMGG00000023117	pabpc1l	96	86.905	Periophthalmus_magnuspinnatus
ENSBTAG00000055300	-	93	44.286	ENSPMGG00000023121	-	62	44.286	Periophthalmus_magnuspinnatus
ENSBTAG00000055300	-	100	87.500	ENSPEMG00000020671	Pabpc1l	59	87.500	Peromyscus_maniculatus_bairdii
ENSBTAG00000055300	-	100	87.500	ENSPFOG00000013241	pabpc1l	63	87.500	Poecilia_formosa
ENSBTAG00000055300	-	100	87.500	ENSPLAG00000017490	-	69	87.500	Poecilia_latipinna
ENSBTAG00000055300	-	77	89.231	ENSPLAG00000023686	-	92	89.231	Poecilia_latipinna
ENSBTAG00000055300	-	77	89.231	ENSPMEG00000009185	-	88	89.231	Poecilia_mexicana
ENSBTAG00000055300	-	100	87.500	ENSPMEG00000007677	pabpc1l	64	87.500	Poecilia_mexicana
ENSBTAG00000055300	-	100	87.500	ENSPREG00000015886	pabpc1l	94	87.500	Poecilia_reticulata
ENSBTAG00000055300	-	100	96.429	ENSPPYG00000011042	PABPC1L	59	96.429	Pongo_abelii
ENSBTAG00000055300	-	100	95.238	ENSPCOG00000020630	PABPC1L	60	95.238	Propithecus_coquereli
ENSBTAG00000055300	-	100	97.024	ENSPVAG00000012663	PABPC1L	60	97.024	Pteropus_vampyrus
ENSBTAG00000055300	-	100	86.905	ENSPNYG00000004101	pabpc1l	72	86.014	Pundamilia_nyererei
ENSBTAG00000055300	-	100	87.500	ENSPNAG00000021248	pabpc1l	58	87.500	Pygocentrus_nattereri
ENSBTAG00000055300	-	100	87.500	ENSRNOG00000012750	Pabpc1l	59	87.500	Rattus_norvegicus
ENSBTAG00000055300	-	100	96.429	ENSRBIG00000035381	PABPC1L	59	96.429	Rhinopithecus_bieti
ENSBTAG00000055300	-	100	95.833	ENSRROG00000044498	PABPC1L	59	95.833	Rhinopithecus_roxellana
ENSBTAG00000055300	-	100	95.833	ENSSBOG00000009532	-	59	95.833	Saimiri_boliviensis_boliviensis
ENSBTAG00000055300	-	100	88.690	ENSSFOG00015017304	pabpc1l	58	88.690	Scleropages_formosus
ENSBTAG00000055300	-	100	87.500	ENSSMAG00000010516	pabpc1l	93	88.372	Scophthalmus_maximus
ENSBTAG00000055300	-	100	88.095	ENSSDUG00000014743	pabpc1l	63	88.095	Seriola_dumerili
ENSBTAG00000055300	-	100	88.095	ENSSLDG00000006981	pabpc1l	69	88.095	Seriola_lalandi_dorsalis
ENSBTAG00000055300	-	100	92.262	ENSSPUG00000004233	PABPC1L	57	92.262	Sphenodon_punctatus
ENSBTAG00000055300	-	100	86.905	ENSSPAG00000017137	pabpc1l	65	86.905	Stegastes_partitus
ENSBTAG00000055300	-	100	98.214	ENSSSCG00000007382	PABPC1L	60	98.214	Sus_scrofa
ENSBTAG00000055300	-	100	94.048	ENSTGUG00000005114	PABPC1L	63	94.048	Taeniopygia_guttata
ENSBTAG00000055300	-	100	87.500	ENSTRUG00000011085	pabpc1l	63	87.500	Takifugu_rubripes
ENSBTAG00000055300	-	100	81.065	ENSTNIG00000017903	pabpc1l	61	81.065	Tetraodon_nigroviridis
ENSBTAG00000055300	-	100	98.214	ENSTTRG00000007618	PABPC1L	61	98.214	Tursiops_truncatus
ENSBTAG00000055300	-	100	97.619	ENSUAMG00000017682	PABPC1L	62	97.619	Ursus_americanus
ENSBTAG00000055300	-	96	92.727	ENSUMAG00000025436	PABPC1L	84	92.727	Ursus_maritimus
ENSBTAG00000055300	-	100	98.214	ENSVVUG00000018939	PABPC1L	61	98.214	Vulpes_vulpes
ENSBTAG00000055300	-	100	91.667	ENSXETG00000022831	pabpc1l	54	91.667	Xenopus_tropicalis
ENSBTAG00000055300	-	100	87.500	ENSXCOG00000005459	pabpc1l	99	84.397	Xiphophorus_couchianus
ENSBTAG00000055300	-	100	87.500	ENSXMAG00000017135	pabpc1l	69	87.500	Xiphophorus_maculatus