EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000000076 (Gene tree)
Gene ID: 481101
Gene Symbol: PYM1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 15096 bases
Position: chr10:251443-266538
Accession: 45228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000000113	Mago-bind	PF09282.10	6.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000000129	-	1105	XM_538222	ENSCAFP00000000113	203 (aa)	XP_538222	F1PVD9

Gene Model

Click here to download ENSCAFG00000000076's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03013	RNA transport	KEGG
cfa03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000076	PYM1	100	97.537	ENSG00000170473	PYM1	100	97.537	Homo_sapiens
ENSCAFG00000000076	PYM1	99	58.879	ENSAPOG00000023045	pym1	94	59.024	Acanthochromis_polyacanthus
ENSCAFG00000000076	PYM1	93	90.957	ENSAMEG00000003091	PYM1	93	90.957	Ailuropoda_melanoleuca
ENSCAFG00000000076	PYM1	99	61.111	ENSACIG00000012769	pym1	94	60.386	Amphilophus_citrinellus
ENSCAFG00000000076	PYM1	99	59.242	ENSAOCG00000021358	pym1	94	59.804	Amphiprion_ocellaris
ENSCAFG00000000076	PYM1	99	59.242	ENSAPEG00000022679	pym1	94	59.804	Amphiprion_percula
ENSCAFG00000000076	PYM1	99	58.216	ENSATEG00000024022	pym1	94	61.463	Anabas_testudineus
ENSCAFG00000000076	PYM1	94	70.732	ENSACAG00000005714	PYM1	94	70.732	Anolis_carolinensis
ENSCAFG00000000076	PYM1	100	96.552	ENSANAG00000036967	PYM1	100	96.552	Aotus_nancymaae
ENSCAFG00000000076	PYM1	100	57.339	ENSAMXG00000007650	pym1	94	60.194	Astyanax_mexicanus
ENSCAFG00000000076	PYM1	100	97.044	ENSBTAG00000031146	PYM1	100	97.044	Bos_taurus
ENSCAFG00000000076	PYM1	100	96.552	ENSCJAG00000041077	PYM1	100	96.552	Callithrix_jacchus
ENSCAFG00000000076	PYM1	100	100.000	ENSCAFG00020026099	PYM1	100	100.000	Canis_lupus_dingo
ENSCAFG00000000076	PYM1	94	94.241	ENSCHIG00000026207	PYM1	94	94.241	Capra_hircus
ENSCAFG00000000076	PYM1	94	93.717	ENSTSYG00000000787	PYM1	94	93.717	Carlito_syrichta
ENSCAFG00000000076	PYM1	88	91.620	ENSCAPG00000010374	PYM1	94	91.620	Cavia_aperea
ENSCAFG00000000076	PYM1	94	92.147	ENSCPOG00000031546	PYM1	94	92.147	Cavia_porcellus
ENSCAFG00000000076	PYM1	100	97.044	ENSCCAG00000026187	PYM1	100	97.044	Cebus_capucinus
ENSCAFG00000000076	PYM1	100	97.537	ENSCATG00000018801	PYM1	100	97.537	Cercocebus_atys
ENSCAFG00000000076	PYM1	94	87.958	ENSCLAG00000007964	PYM1	94	87.958	Chinchilla_lanigera
ENSCAFG00000000076	PYM1	95	97.396	ENSCSAG00000005291	PYM1	98	97.396	Chlorocebus_sabaeus
ENSCAFG00000000076	PYM1	98	40.191	ENSCING00000006448	-	93	38.191	Ciona_intestinalis
ENSCAFG00000000076	PYM1	98	39.336	ENSCSAVG00000009805	-	89	39.500	Ciona_savignyi
ENSCAFG00000000076	PYM1	98	88.889	ENSCANG00000019757	-	86	93.684	Colobus_angolensis_palliatus
ENSCAFG00000000076	PYM1	100	97.537	ENSCANG00000020338	-	100	97.537	Colobus_angolensis_palliatus
ENSCAFG00000000076	PYM1	88	75.978	ENSCGRG00001004231	-	93	73.298	Cricetulus_griseus_chok1gshd
ENSCAFG00000000076	PYM1	94	90.052	ENSCGRG00001018051	-	94	90.052	Cricetulus_griseus_chok1gshd
ENSCAFG00000000076	PYM1	88	75.978	ENSCGRG00000018933	-	93	73.298	Cricetulus_griseus_crigri
ENSCAFG00000000076	PYM1	94	90.052	ENSCGRG00000012495	-	94	90.052	Cricetulus_griseus_crigri
ENSCAFG00000000076	PYM1	94	56.158	ENSCSEG00000021531	pym1	94	59.113	Cynoglossus_semilaevis
ENSCAFG00000000076	PYM1	94	62.189	ENSCVAG00000017360	pym1	81	61.458	Cyprinodon_variegatus
ENSCAFG00000000076	PYM1	99	54.630	ENSDARG00000046024	pym1	94	55.556	Danio_rerio
ENSCAFG00000000076	PYM1	94	92.670	ENSDNOG00000048414	PYM1	86	92.670	Dasypus_novemcinctus
ENSCAFG00000000076	PYM1	94	94.241	ENSDORG00000029448	Pym1	94	94.241	Dipodomys_ordii
ENSCAFG00000000076	PYM1	93	34.951	FBgn0034918	Pym	88	35.385	Drosophila_melanogaster
ENSCAFG00000000076	PYM1	89	89.444	ENSETEG00000004461	-	94	89.444	Echinops_telfairi
ENSCAFG00000000076	PYM1	93	92.553	ENSEASG00005002271	PYM1	85	92.553	Equus_asinus_asinus
ENSCAFG00000000076	PYM1	100	97.044	ENSECAG00000011870	PYM1	100	97.044	Equus_caballus
ENSCAFG00000000076	PYM1	96	58.911	ENSELUG00000024250	pym1	94	60.714	Esox_lucius
ENSCAFG00000000076	PYM1	100	97.537	ENSFCAG00000013967	PYM1	100	97.537	Felis_catus
ENSCAFG00000000076	PYM1	94	92.670	ENSFDAG00000006314	PYM1	94	92.670	Fukomys_damarensis
ENSCAFG00000000076	PYM1	94	60.396	ENSFHEG00000005884	pym1	94	60.396	Fundulus_heteroclitus
ENSCAFG00000000076	PYM1	94	56.784	ENSGMOG00000007239	pym1	93	57.789	Gadus_morhua
ENSCAFG00000000076	PYM1	94	71.282	ENSGALG00000046169	PYM1	94	71.078	Gallus_gallus
ENSCAFG00000000076	PYM1	99	61.502	ENSGAFG00000003280	pym1	93	61.692	Gambusia_affinis
ENSCAFG00000000076	PYM1	100	56.796	ENSGACG00000010703	pym1	94	56.923	Gasterosteus_aculeatus
ENSCAFG00000000076	PYM1	92	66.176	ENSGAGG00000001973	PYM1	88	66.176	Gopherus_agassizii
ENSCAFG00000000076	PYM1	100	97.044	ENSGGOG00000043246	PYM1	100	97.044	Gorilla_gorilla
ENSCAFG00000000076	PYM1	94	60.294	ENSHBUG00000012719	pym1	94	61.275	Haplochromis_burtoni
ENSCAFG00000000076	PYM1	94	93.717	ENSHGLG00000017155	PYM1	94	93.717	Heterocephalus_glaber_female
ENSCAFG00000000076	PYM1	94	93.717	ENSHGLG00100015341	PYM1	94	93.717	Heterocephalus_glaber_male
ENSCAFG00000000076	PYM1	99	57.944	ENSHCOG00000007987	pym1	80	58.416	Hippocampus_comes
ENSCAFG00000000076	PYM1	100	58.525	ENSIPUG00000005975	wibga	94	59.024	Ictalurus_punctatus
ENSCAFG00000000076	PYM1	94	95.288	ENSSTOG00000014206	PYM1	94	95.288	Ictidomys_tridecemlineatus
ENSCAFG00000000076	PYM1	94	89.529	ENSJJAG00000013338	Pym1	94	89.529	Jaculus_jaculus
ENSCAFG00000000076	PYM1	99	57.658	ENSKMAG00000006351	pym1	95	56.808	Kryptolebias_marmoratus
ENSCAFG00000000076	PYM1	99	60.577	ENSLBEG00000015707	pym1	94	60.302	Labrus_bergylta
ENSCAFG00000000076	PYM1	89	63.874	ENSLACG00000014398	PYM1	90	63.212	Latimeria_chalumnae
ENSCAFG00000000076	PYM1	94	94.241	ENSLAFG00000002369	PYM1	94	94.241	Loxodonta_africana
ENSCAFG00000000076	PYM1	100	97.537	ENSMFAG00000003048	PYM1	100	97.537	Macaca_fascicularis
ENSCAFG00000000076	PYM1	100	97.537	ENSMMUG00000011002	PYM1	100	97.537	Macaca_mulatta
ENSCAFG00000000076	PYM1	100	97.537	ENSMNEG00000034677	PYM1	100	97.537	Macaca_nemestrina
ENSCAFG00000000076	PYM1	100	97.537	ENSMLEG00000007971	PYM1	100	97.537	Mandrillus_leucophaeus
ENSCAFG00000000076	PYM1	99	56.818	ENSMAMG00000001588	pym1	94	58.768	Mastacembelus_armatus
ENSCAFG00000000076	PYM1	94	59.804	ENSMZEG00005026458	pym1	94	60.784	Maylandia_zebra
ENSCAFG00000000076	PYM1	94	89.529	ENSMAUG00000007318	Pym1	94	89.529	Mesocricetus_auratus
ENSCAFG00000000076	PYM1	94	94.764	ENSMICG00000032962	PYM1	94	94.764	Microcebus_murinus
ENSCAFG00000000076	PYM1	94	89.005	ENSMOCG00000010208	Pym1	94	89.005	Microtus_ochrogaster
ENSCAFG00000000076	PYM1	99	58.738	ENSMMOG00000009301	pym1	92	60.825	Mola_mola
ENSCAFG00000000076	PYM1	99	59.524	ENSMALG00000013496	pym1	94	59.204	Monopterus_albus
ENSCAFG00000000076	PYM1	94	90.052	MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	Mus_caroli
ENSCAFG00000000076	PYM1	94	91.099	ENSMUSG00000064030	Pym1	94	91.099	Mus_musculus
ENSCAFG00000000076	PYM1	94	89.005	MGP_PahariEiJ_G0031131	Pym1	94	89.005	Mus_pahari
ENSCAFG00000000076	PYM1	94	91.099	MGP_SPRETEiJ_G0016778	Pym1	94	91.099	Mus_spretus
ENSCAFG00000000076	PYM1	100	97.537	ENSMPUG00000000931	PYM1	100	97.537	Mustela_putorius_furo
ENSCAFG00000000076	PYM1	94	89.005	ENSMLUG00000003586	PYM1	94	89.005	Myotis_lucifugus
ENSCAFG00000000076	PYM1	89	91.667	ENSNGAG00000019207	Pym1	88	90.659	Nannospalax_galili
ENSCAFG00000000076	PYM1	99	61.033	ENSNBRG00000006951	pym1	94	61.275	Neolamprologus_brichardi
ENSCAFG00000000076	PYM1	100	97.537	ENSNLEG00000017588	PYM1	100	97.537	Nomascus_leucogenys
ENSCAFG00000000076	PYM1	88	79.775	ENSMEUG00000001017	PYM1	93	79.661	Notamacropus_eugenii
ENSCAFG00000000076	PYM1	89	91.111	ENSOPRG00000007797	PYM1	88	91.111	Ochotona_princeps
ENSCAFG00000000076	PYM1	94	93.717	ENSODEG00000004289	PYM1	94	93.717	Octodon_degus
ENSCAFG00000000076	PYM1	94	59.420	ENSONIG00000016740	pym1	94	60.386	Oreochromis_niloticus
ENSCAFG00000000076	PYM1	89	93.333	ENSOCUG00000025969	PYM1	81	93.333	Oryctolagus_cuniculus
ENSCAFG00000000076	PYM1	99	62.911	ENSORLG00000030592	pym1	94	62.562	Oryzias_latipes
ENSCAFG00000000076	PYM1	99	62.559	ENSORLG00020011264	pym1	94	62.687	Oryzias_latipes_hni
ENSCAFG00000000076	PYM1	99	63.679	ENSORLG00015005287	pym1	94	63.366	Oryzias_latipes_hsok
ENSCAFG00000000076	PYM1	99	64.251	ENSOMEG00000022250	pym1	94	63.636	Oryzias_melastigma
ENSCAFG00000000076	PYM1	91	95.109	ENSOGAG00000007038	PYM1	90	95.109	Otolemur_garnettii
ENSCAFG00000000076	PYM1	94	94.764	ENSOARG00000010856	PYM1	94	94.764	Ovis_aries
ENSCAFG00000000076	PYM1	100	97.537	ENSPPAG00000043630	PYM1	100	97.537	Pan_paniscus
ENSCAFG00000000076	PYM1	94	95.812	ENSPPRG00000013243	PYM1	94	95.812	Panthera_pardus
ENSCAFG00000000076	PYM1	94	95.288	ENSPTIG00000017380	PYM1	94	95.288	Panthera_tigris_altaica
ENSCAFG00000000076	PYM1	100	97.537	ENSPTRG00000005067	PYM1	100	97.537	Pan_troglodytes
ENSCAFG00000000076	PYM1	100	97.044	ENSPANG00000009562	PYM1	100	97.044	Papio_anubis
ENSCAFG00000000076	PYM1	100	61.792	ENSPKIG00000006301	pym1	94	61.000	Paramormyrops_kingsleyae
ENSCAFG00000000076	PYM1	89	65.608	ENSPSIG00000003043	PYM1	90	66.316	Pelodiscus_sinensis
ENSCAFG00000000076	PYM1	100	62.201	ENSPMGG00000023161	pym1	94	62.437	Periophthalmus_magnuspinnatus
ENSCAFG00000000076	PYM1	94	88.482	ENSPEMG00000009372	Pym1	94	88.482	Peromyscus_maniculatus_bairdii
ENSCAFG00000000076	PYM1	92	80.108	ENSPCIG00000024658	PYM1	91	79.787	Phascolarctos_cinereus
ENSCAFG00000000076	PYM1	99	63.033	ENSPFOG00000008193	pym1	93	63.317	Poecilia_formosa
ENSCAFG00000000076	PYM1	99	62.559	ENSPLAG00000009228	pym1	93	62.814	Poecilia_latipinna
ENSCAFG00000000076	PYM1	99	62.559	ENSPMEG00000001505	pym1	93	62.814	Poecilia_mexicana
ENSCAFG00000000076	PYM1	89	95.556	ENSPPYG00000004635	PYM1	92	95.556	Pongo_abelii
ENSCAFG00000000076	PYM1	94	95.812	ENSPCOG00000019706	PYM1	94	95.812	Propithecus_coquereli
ENSCAFG00000000076	PYM1	95	97.917	ENSPVAG00000011437	PYM1	98	97.917	Pteropus_vampyrus
ENSCAFG00000000076	PYM1	94	61.576	ENSPNYG00000012871	pym1	94	61.084	Pundamilia_nyererei
ENSCAFG00000000076	PYM1	99	59.633	ENSPNAG00000018833	pym1	94	60.287	Pygocentrus_nattereri
ENSCAFG00000000076	PYM1	94	84.896	ENSRNOG00000058130	Pym1	94	84.896	Rattus_norvegicus
ENSCAFG00000000076	PYM1	92	67.914	ENSRNOG00000049415	AABR07055413.1	91	62.766	Rattus_norvegicus
ENSCAFG00000000076	PYM1	100	93.103	ENSRBIG00000033362	PYM1	100	93.103	Rhinopithecus_bieti
ENSCAFG00000000076	PYM1	100	97.537	ENSRROG00000043620	PYM1	100	97.537	Rhinopithecus_roxellana
ENSCAFG00000000076	PYM1	100	97.044	ENSSBOG00000029393	PYM1	100	97.044	Saimiri_boliviensis_boliviensis
ENSCAFG00000000076	PYM1	93	81.481	ENSSHAG00000008280	PYM1	93	81.481	Sarcophilus_harrisii
ENSCAFG00000000076	PYM1	93	64.583	ENSSFOG00015021475	pym1	94	64.103	Scleropages_formosus
ENSCAFG00000000076	PYM1	99	59.242	ENSSMAG00000020912	pym1	94	60.891	Scophthalmus_maximus
ENSCAFG00000000076	PYM1	99	57.209	ENSSDUG00000001807	pym1	94	60.386	Seriola_dumerili
ENSCAFG00000000076	PYM1	99	61.463	ENSSLDG00000013730	pym1	94	63.959	Seriola_lalandi_dorsalis
ENSCAFG00000000076	PYM1	89	91.111	ENSSARG00000009569	PYM1	94	91.111	Sorex_araneus
ENSCAFG00000000076	PYM1	89	65.263	ENSSPUG00000015059	PYM1	90	65.263	Sphenodon_punctatus
ENSCAFG00000000076	PYM1	99	58.411	ENSSPAG00000020100	pym1	94	59.135	Stegastes_partitus
ENSCAFG00000000076	PYM1	94	95.812	ENSSSCG00000040825	PYM1	94	95.812	Sus_scrofa
ENSCAFG00000000076	PYM1	99	59.809	ENSTRUG00000021367	pym1	93	61.224	Takifugu_rubripes
ENSCAFG00000000076	PYM1	99	55.455	ENSTNIG00000012534	pym1	92	56.311	Tetraodon_nigroviridis
ENSCAFG00000000076	PYM1	89	88.889	ENSTBEG00000004208	PYM1	94	88.889	Tupaia_belangeri
ENSCAFG00000000076	PYM1	95	98.438	ENSTTRG00000014971	PYM1	98	98.438	Tursiops_truncatus
ENSCAFG00000000076	PYM1	94	95.288	ENSUAMG00000014521	PYM1	94	95.288	Ursus_americanus
ENSCAFG00000000076	PYM1	89	94.444	ENSUMAG00000016241	PYM1	84	92.432	Ursus_maritimus
ENSCAFG00000000076	PYM1	100	99.015	ENSVVUG00000022749	PYM1	100	99.015	Vulpes_vulpes
ENSCAFG00000000076	PYM1	94	63.077	ENSXETG00000021850	pym1	94	63.959	Xenopus_tropicalis
ENSCAFG00000000076	PYM1	99	61.611	ENSXMAG00000011649	pym1	93	61.809	Xiphophorus_maculatus