EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000000215 (Gene tree)
Gene ID: 474412
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 45113 bases
Position: chr10:1378669-1423781
Accession: 474412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000040395	R3H	PF01424.22	2.4e-10	1	1
ENSCAFP00000000311	R3H	PF01424.22	2.5e-10	1	1
ENSCAFP00000040188	R3H	PF01424.22	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048795	R3HDM2-201	3220	-	ENSCAFP00000040188	1059 (aa)	-	J9P3Q9
ENSCAFT00000000344	R3HDM2-203	3033	XM_853562	ENSCAFP00000000311	1011 (aa)	XP_013972655	E2QZT6
ENSCAFT00000047978	R3HDM2-202	2985	-	ENSCAFP00000040395	994 (aa)	-	J9P4B6

Gene Model

Click here to download ENSCAFG00000000215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000000215	R3HDM2	100	47.826	ENSCAFG00000005075	R3HDM1	99	47.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000215	R3HDM2	100	97.230	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSCAFG00000000215	R3HDM2	99	66.184	ENSAPOG00000020341	r3hdm2	95	67.745	Acanthochromis_polyacanthus
ENSCAFG00000000215	R3HDM2	61	36.898	ENSAPOG00000021873	-	87	35.029	Acanthochromis_polyacanthus
ENSCAFG00000000215	R3HDM2	100	95.315	ENSAMEG00000004812	R3HDM2	98	97.955	Ailuropoda_melanoleuca
ENSCAFG00000000215	R3HDM2	93	66.000	ENSACIG00000016146	r3hdm2	98	65.058	Amphilophus_citrinellus
ENSCAFG00000000215	R3HDM2	99	64.292	ENSAOCG00000023694	r3hdm2	95	66.435	Amphiprion_ocellaris
ENSCAFG00000000215	R3HDM2	99	66.087	ENSAPEG00000008851	r3hdm2	100	66.667	Amphiprion_percula
ENSCAFG00000000215	R3HDM2	99	64.712	ENSATEG00000025024	r3hdm2	100	68.619	Anabas_testudineus
ENSCAFG00000000215	R3HDM2	100	83.292	ENSAPLG00000004298	R3HDM2	94	83.130	Anas_platyrhynchos
ENSCAFG00000000215	R3HDM2	100	82.485	ENSACAG00000006388	R3HDM2	100	82.387	Anolis_carolinensis
ENSCAFG00000000215	R3HDM2	100	97.033	ENSANAG00000025397	-	100	97.033	Aotus_nancymaae
ENSCAFG00000000215	R3HDM2	98	92.300	ENSANAG00000031310	-	100	90.349	Aotus_nancymaae
ENSCAFG00000000215	R3HDM2	99	63.223	ENSACLG00000019106	r3hdm2	95	66.468	Astatotilapia_calliptera
ENSCAFG00000000215	R3HDM2	84	71.353	ENSAMXG00000017180	r3hdm2	99	60.874	Astyanax_mexicanus
ENSCAFG00000000215	R3HDM2	100	97.183	ENSBTAG00000018361	R3HDM2	100	97.183	Bos_taurus
ENSCAFG00000000215	R3HDM2	100	96.637	ENSCJAG00000007365	R3HDM2	100	96.637	Callithrix_jacchus
ENSCAFG00000000215	R3HDM2	100	99.296	ENSCAFG00020023713	R3HDM2	100	99.296	Canis_lupus_dingo
ENSCAFG00000000215	R3HDM2	100	96.781	ENSCHIG00000014022	R3HDM2	100	96.781	Capra_hircus
ENSCAFG00000000215	R3HDM2	100	95.549	ENSTSYG00000001449	R3HDM2	100	95.549	Carlito_syrichta
ENSCAFG00000000215	R3HDM2	100	93.561	ENSCPOG00000009217	R3HDM2	100	92.555	Cavia_porcellus
ENSCAFG00000000215	R3HDM2	89	96.882	ENSCCAG00000026083	R3HDM2	100	96.595	Cebus_capucinus
ENSCAFG00000000215	R3HDM2	100	97.033	ENSCATG00000036929	R3HDM2	100	97.033	Cercocebus_atys
ENSCAFG00000000215	R3HDM2	100	94.277	ENSCLAG00000011997	R3HDM2	100	93.189	Chinchilla_lanigera
ENSCAFG00000000215	R3HDM2	100	93.404	ENSCSAG00000004911	R3HDM2	100	93.016	Chlorocebus_sabaeus
ENSCAFG00000000215	R3HDM2	75	92.216	ENSCHOG00000005636	R3HDM2	91	91.816	Choloepus_hoffmanni
ENSCAFG00000000215	R3HDM2	100	80.211	ENSCPBG00000013922	R3HDM2	100	80.134	Chrysemys_picta_bellii
ENSCAFG00000000215	R3HDM2	100	96.579	ENSCANG00000043807	R3HDM2	100	96.579	Colobus_angolensis_palliatus
ENSCAFG00000000215	R3HDM2	100	93.775	ENSCGRG00001017324	R3hdm2	100	93.173	Cricetulus_griseus_chok1gshd
ENSCAFG00000000215	R3HDM2	100	91.211	ENSCGRG00000003862	R3hdm2	100	90.625	Cricetulus_griseus_crigri
ENSCAFG00000000215	R3HDM2	96	65.192	ENSCSEG00000010925	r3hdm2	100	64.932	Cynoglossus_semilaevis
ENSCAFG00000000215	R3HDM2	99	61.968	ENSCVAG00000009058	r3hdm2	100	63.492	Cyprinodon_variegatus
ENSCAFG00000000215	R3HDM2	93	65.005	ENSDARG00000102610	r3hdm2	99	65.890	Danio_rerio
ENSCAFG00000000215	R3HDM2	100	92.471	ENSDNOG00000015033	R3HDM2	100	95.727	Dasypus_novemcinctus
ENSCAFG00000000215	R3HDM2	94	93.089	ENSDORG00000011462	R3hdm2	99	93.089	Dipodomys_ordii
ENSCAFG00000000215	R3HDM2	100	97.286	ENSEASG00005007091	R3HDM2	100	97.286	Equus_asinus_asinus
ENSCAFG00000000215	R3HDM2	100	97.384	ENSECAG00000003157	R3HDM2	100	97.384	Equus_caballus
ENSCAFG00000000215	R3HDM2	96	63.254	ENSELUG00000015969	r3hdm2	100	61.290	Esox_lucius
ENSCAFG00000000215	R3HDM2	100	98.318	ENSFCAG00000000192	R3HDM2	99	98.332	Felis_catus
ENSCAFG00000000215	R3HDM2	89	84.375	ENSFALG00000000255	R3HDM2	100	75.551	Ficedula_albicollis
ENSCAFG00000000215	R3HDM2	100	93.498	ENSFDAG00000019385	R3HDM2	100	94.680	Fukomys_damarensis
ENSCAFG00000000215	R3HDM2	99	64.182	ENSFHEG00000016484	r3hdm2	95	66.395	Fundulus_heteroclitus
ENSCAFG00000000215	R3HDM2	95	63.054	ENSGMOG00000007961	r3hdm2	98	64.588	Gadus_morhua
ENSCAFG00000000215	R3HDM2	99	80.682	ENSGALG00000043736	R3HDM2	100	77.915	Gallus_gallus
ENSCAFG00000000215	R3HDM2	61	36.802	ENSGAFG00000015558	-	88	35.629	Gambusia_affinis
ENSCAFG00000000215	R3HDM2	99	63.168	ENSGAFG00000013887	r3hdm2	100	64.360	Gambusia_affinis
ENSCAFG00000000215	R3HDM2	95	66.077	ENSGACG00000006442	r3hdm2	98	68.876	Gasterosteus_aculeatus
ENSCAFG00000000215	R3HDM2	100	80.488	ENSGAGG00000017797	R3HDM2	100	80.293	Gopherus_agassizii
ENSCAFG00000000215	R3HDM2	100	97.132	ENSGGOG00000015007	R3HDM2	100	97.132	Gorilla_gorilla
ENSCAFG00000000215	R3HDM2	88	86.689	ENSHGLG00000010421	-	97	86.689	Heterocephalus_glaber_female
ENSCAFG00000000215	R3HDM2	100	94.466	ENSHGLG00000010434	-	100	93.676	Heterocephalus_glaber_female
ENSCAFG00000000215	R3HDM2	100	94.368	ENSHGLG00100004183	-	100	94.171	Heterocephalus_glaber_male
ENSCAFG00000000215	R3HDM2	96	82.968	ENSHGLG00100018871	-	99	83.613	Heterocephalus_glaber_male
ENSCAFG00000000215	R3HDM2	99	63.859	ENSHCOG00000001142	r3hdm2	92	66.563	Hippocampus_comes
ENSCAFG00000000215	R3HDM2	99	60.996	ENSIPUG00000023873	r3hdm2	87	79.019	Ictalurus_punctatus
ENSCAFG00000000215	R3HDM2	100	90.763	ENSSTOG00000013424	R3HDM2	100	90.763	Ictidomys_tridecemlineatus
ENSCAFG00000000215	R3HDM2	100	95.648	ENSJJAG00000010001	R3hdm2	100	95.450	Jaculus_jaculus
ENSCAFG00000000215	R3HDM2	93	68.842	ENSKMAG00000012695	r3hdm2	99	67.789	Kryptolebias_marmoratus
ENSCAFG00000000215	R3HDM2	95	65.411	ENSLBEG00000013115	r3hdm2	92	65.213	Labrus_bergylta
ENSCAFG00000000215	R3HDM2	95	69.920	ENSLACG00000019064	r3hdm2	98	72.308	Latimeria_chalumnae
ENSCAFG00000000215	R3HDM2	100	71.078	ENSLOCG00000005976	r3hdm2	100	71.373	Lepisosteus_oculatus
ENSCAFG00000000215	R3HDM2	100	92.433	ENSLAFG00000006510	R3HDM2	98	94.829	Loxodonta_africana
ENSCAFG00000000215	R3HDM2	100	96.881	ENSMFAG00000036385	R3HDM2	100	96.881	Macaca_fascicularis
ENSCAFG00000000215	R3HDM2	100	96.881	ENSMMUG00000021789	R3HDM2	100	96.881	Macaca_mulatta
ENSCAFG00000000215	R3HDM2	100	97.036	ENSMNEG00000025314	R3HDM2	100	97.036	Macaca_nemestrina
ENSCAFG00000000215	R3HDM2	100	97.132	ENSMLEG00000028915	R3HDM2	100	97.132	Mandrillus_leucophaeus
ENSCAFG00000000215	R3HDM2	99	62.815	ENSMAMG00000009793	r3hdm2	95	65.179	Mastacembelus_armatus
ENSCAFG00000000215	R3HDM2	99	63.223	ENSMZEG00005007319	r3hdm2	95	66.468	Maylandia_zebra
ENSCAFG00000000215	R3HDM2	100	97.044	ENSMICG00000012389	R3HDM2	100	97.044	Microcebus_murinus
ENSCAFG00000000215	R3HDM2	100	93.966	ENSMOCG00000014425	R3hdm2	100	93.966	Microtus_ochrogaster
ENSCAFG00000000215	R3HDM2	95	66.527	ENSMMOG00000007448	r3hdm2	99	65.654	Mola_mola
ENSCAFG00000000215	R3HDM2	84	77.460	ENSMALG00000010211	r3hdm2	94	69.452	Monopterus_albus
ENSCAFG00000000215	R3HDM2	100	94.669	MGP_CAROLIEiJ_G0015896	R3hdm2	100	93.682	Mus_caroli
ENSCAFG00000000215	R3HDM2	100	94.960	ENSMUSG00000025404	R3hdm2	100	94.071	Mus_musculus
ENSCAFG00000000215	R3HDM2	100	93.769	MGP_PahariEiJ_G0031189	R3hdm2	100	93.769	Mus_pahari
ENSCAFG00000000215	R3HDM2	100	94.576	MGP_SPRETEiJ_G0016722	R3hdm2	100	94.181	Mus_spretus
ENSCAFG00000000215	R3HDM2	96	96.981	ENSMPUG00000001818	R3HDM2	97	96.981	Mustela_putorius_furo
ENSCAFG00000000215	R3HDM2	100	93.864	ENSMLUG00000004980	R3HDM2	98	96.484	Myotis_lucifugus
ENSCAFG00000000215	R3HDM2	100	96.044	ENSNGAG00000018800	R3hdm2	100	96.044	Nannospalax_galili
ENSCAFG00000000215	R3HDM2	94	64.901	ENSNBRG00000004483	r3hdm2	99	65.935	Neolamprologus_brichardi
ENSCAFG00000000215	R3HDM2	100	96.934	ENSNLEG00000017351	R3HDM2	100	96.934	Nomascus_leucogenys
ENSCAFG00000000215	R3HDM2	99	80.630	ENSMEUG00000008588	R3HDM2	100	79.389	Notamacropus_eugenii
ENSCAFG00000000215	R3HDM2	100	86.053	ENSOPRG00000013670	R3HDM2	100	86.053	Ochotona_princeps
ENSCAFG00000000215	R3HDM2	99	65.815	ENSONIG00000005075	r3hdm2	95	69.350	Oreochromis_niloticus
ENSCAFG00000000215	R3HDM2	100	93.034	ENSOCUG00000013258	R3HDM2	100	93.034	Oryctolagus_cuniculus
ENSCAFG00000000215	R3HDM2	99	65.175	ENSORLG00000005502	r3hdm2	97	65.081	Oryzias_latipes
ENSCAFG00000000215	R3HDM2	99	63.576	ENSORLG00020017069	r3hdm2	99	63.732	Oryzias_latipes_hni
ENSCAFG00000000215	R3HDM2	99	63.671	ENSORLG00015012735	r3hdm2	99	63.828	Oryzias_latipes_hsok
ENSCAFG00000000215	R3HDM2	99	60.887	ENSOMEG00000018079	r3hdm2	93	63.560	Oryzias_melastigma
ENSCAFG00000000215	R3HDM2	96	82.899	ENSOGAG00000027966	-	99	81.328	Otolemur_garnettii
ENSCAFG00000000215	R3HDM2	100	96.739	ENSOGAG00000012055	R3HDM2	100	96.739	Otolemur_garnettii
ENSCAFG00000000215	R3HDM2	100	96.982	ENSOARG00000006929	R3HDM2	100	96.982	Ovis_aries
ENSCAFG00000000215	R3HDM2	100	97.230	ENSPPAG00000034395	R3HDM2	100	97.230	Pan_paniscus
ENSCAFG00000000215	R3HDM2	100	98.318	ENSPPRG00000009240	R3HDM2	100	98.318	Panthera_pardus
ENSCAFG00000000215	R3HDM2	100	98.318	ENSPTIG00000008752	R3HDM2	100	98.318	Panthera_tigris_altaica
ENSCAFG00000000215	R3HDM2	100	96.982	ENSPTRG00000046457	R3HDM2	100	96.982	Pan_troglodytes
ENSCAFG00000000215	R3HDM2	98	95.871	ENSPANG00000024002	R3HDM2	100	94.864	Papio_anubis
ENSCAFG00000000215	R3HDM2	95	67.532	ENSPKIG00000003171	r3hdm2	97	65.973	Paramormyrops_kingsleyae
ENSCAFG00000000215	R3HDM2	63	72.684	ENSPSIG00000006954	R3HDM2	100	72.684	Pelodiscus_sinensis
ENSCAFG00000000215	R3HDM2	93	69.862	ENSPMGG00000007061	r3hdm2	99	69.010	Periophthalmus_magnuspinnatus
ENSCAFG00000000215	R3HDM2	100	93.281	ENSPEMG00000015964	R3hdm2	100	92.194	Peromyscus_maniculatus_bairdii
ENSCAFG00000000215	R3HDM2	100	90.672	ENSPCIG00000023841	R3HDM2	100	89.067	Phascolarctos_cinereus
ENSCAFG00000000215	R3HDM2	94	71.316	ENSPFOG00000006077	r3hdm2	98	73.158	Poecilia_formosa
ENSCAFG00000000215	R3HDM2	99	64.541	ENSPLAG00000002971	r3hdm2	99	64.124	Poecilia_latipinna
ENSCAFG00000000215	R3HDM2	99	64.541	ENSPMEG00000005330	r3hdm2	99	64.124	Poecilia_mexicana
ENSCAFG00000000215	R3HDM2	61	35.618	ENSPMEG00000014457	-	69	41.365	Poecilia_mexicana
ENSCAFG00000000215	R3HDM2	99	64.541	ENSPREG00000008424	r3hdm2	100	62.784	Poecilia_reticulata
ENSCAFG00000000215	R3HDM2	98	90.606	ENSPPYG00000004685	R3HDM2	81	90.606	Pongo_abelii
ENSCAFG00000000215	R3HDM2	88	94.118	ENSPCAG00000014642	R3HDM2	90	97.473	Procavia_capensis
ENSCAFG00000000215	R3HDM2	100	97.230	ENSPCOG00000013201	R3HDM2	100	97.230	Propithecus_coquereli
ENSCAFG00000000215	R3HDM2	100	94.056	ENSPVAG00000003967	R3HDM2	98	96.680	Pteropus_vampyrus
ENSCAFG00000000215	R3HDM2	94	65.181	ENSPNYG00000013479	r3hdm2	100	65.869	Pundamilia_nyererei
ENSCAFG00000000215	R3HDM2	99	63.567	ENSPNAG00000017473	r3hdm2	95	64.782	Pygocentrus_nattereri
ENSCAFG00000000215	R3HDM2	100	93.373	ENSRNOG00000007801	R3hdm2	100	93.173	Rattus_norvegicus
ENSCAFG00000000215	R3HDM2	100	94.263	ENSRBIG00000037403	R3HDM2	100	93.769	Rhinopithecus_bieti
ENSCAFG00000000215	R3HDM2	100	96.934	ENSRROG00000022271	R3HDM2	100	96.934	Rhinopithecus_roxellana
ENSCAFG00000000215	R3HDM2	100	97.033	ENSSBOG00000023547	R3HDM2	100	97.033	Saimiri_boliviensis_boliviensis
ENSCAFG00000000215	R3HDM2	100	84.952	ENSSHAG00000003511	R3HDM2	99	91.290	Sarcophilus_harrisii
ENSCAFG00000000215	R3HDM2	94	71.005	ENSSFOG00015011219	r3hdm2	99	69.351	Scleropages_formosus
ENSCAFG00000000215	R3HDM2	99	64.597	ENSSMAG00000012073	r3hdm2	100	65.449	Scophthalmus_maximus
ENSCAFG00000000215	R3HDM2	99	66.280	ENSSDUG00000019269	r3hdm2	100	65.866	Seriola_dumerili
ENSCAFG00000000215	R3HDM2	99	64.700	ENSSLDG00000005252	r3hdm2	100	65.900	Seriola_lalandi_dorsalis
ENSCAFG00000000215	R3HDM2	93	89.908	ENSSARG00000003958	R3HDM2	94	90.406	Sorex_araneus
ENSCAFG00000000215	R3HDM2	100	78.973	ENSSPUG00000014132	R3HDM2	100	78.391	Sphenodon_punctatus
ENSCAFG00000000215	R3HDM2	99	65.957	ENSSPAG00000022594	r3hdm2	100	66.596	Stegastes_partitus
ENSCAFG00000000215	R3HDM2	100	97.384	ENSSSCG00000026498	R3HDM2	100	97.384	Sus_scrofa
ENSCAFG00000000215	R3HDM2	72	80.469	ENSTGUG00000015881	R3HDM2	100	80.052	Taeniopygia_guttata
ENSCAFG00000000215	R3HDM2	95	64.264	ENSTRUG00000015075	r3hdm2	99	63.955	Takifugu_rubripes
ENSCAFG00000000215	R3HDM2	90	77.299	ENSTNIG00000007057	r3hdm2	89	77.546	Tetraodon_nigroviridis
ENSCAFG00000000215	R3HDM2	81	97.849	ENSTBEG00000015967	R3HDM2	81	97.849	Tupaia_belangeri
ENSCAFG00000000215	R3HDM2	96	92.934	ENSTTRG00000013082	R3HDM2	93	92.934	Tursiops_truncatus
ENSCAFG00000000215	R3HDM2	100	98.390	ENSUAMG00000020913	R3HDM2	98	96.582	Ursus_americanus
ENSCAFG00000000215	R3HDM2	100	92.771	ENSUMAG00000019179	R3HDM2	100	92.671	Ursus_maritimus
ENSCAFG00000000215	R3HDM2	100	88.303	ENSVPAG00000008656	R3HDM2	100	88.303	Vicugna_pacos
ENSCAFG00000000215	R3HDM2	100	99.622	ENSVVUG00000018014	R3HDM2	100	99.622	Vulpes_vulpes
ENSCAFG00000000215	R3HDM2	100	74.300	ENSXETG00000017153	r3hdm2	100	73.000	Xenopus_tropicalis
ENSCAFG00000000215	R3HDM2	86	63.240	ENSXCOG00000013882	r3hdm2	100	63.575	Xiphophorus_couchianus
ENSCAFG00000000215	R3HDM2	99	62.952	ENSXMAG00000017978	r3hdm2	100	63.799	Xiphophorus_maculatus
ENSCAFG00000000215	R3HDM2	61	36.215	ENSXMAG00000002994	-	88	35.479	Xiphophorus_maculatus