EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000000454 (Gene tree)
Gene ID: 474833
Gene Symbol: VARS2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 13829 bases
Position: chr12:682033-695861
Accession: 48232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000032497	tRNA-synt_1g	PF09334.11	1e-14	1	1
ENSCAFP00000000685	tRNA-synt_1g	PF09334.11	1.2e-14	1	1
ENSCAFP00000032497	Anticodon_1	PF08264.13	4e-32	1	1
ENSCAFP00000000685	Anticodon_1	PF08264.13	4.1e-32	1	1
ENSCAFP00000032497	tRNA-synt_1	PF00133.22	1e-186	1	1
ENSCAFP00000000685	tRNA-synt_1	PF00133.22	1.8e-182	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000000742	-	3231	-	ENSCAFP00000000685	1076 (aa)	-	F6USV0
ENSCAFT00000037049	-	5153	XM_005627121	ENSCAFP00000032497	1062 (aa)	XP_005627178	F1PUF9

Gene Model

Click here to download ENSCAFG00000000454's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000000454	VARS2	92	51.313	ENSCAFG00000000636	VARS	82	49.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000454	VARS2	92	52.456	ENSAPOG00000007396	vars2	97	51.313	Acanthochromis_polyacanthus
ENSCAFG00000000454	VARS2	100	89.454	ENSAMEG00000012997	VARS2	97	89.454	Ailuropoda_melanoleuca
ENSCAFG00000000454	VARS2	94	53.627	ENSACIG00000004344	vars2	95	53.627	Amphilophus_citrinellus
ENSCAFG00000000454	VARS2	92	52.071	ENSAOCG00000000476	vars2	99	50.507	Amphiprion_ocellaris
ENSCAFG00000000454	VARS2	92	51.972	ENSAPEG00000008646	vars2	97	50.415	Amphiprion_percula
ENSCAFG00000000454	VARS2	91	53.072	ENSATEG00000012291	vars2	96	51.880	Anabas_testudineus
ENSCAFG00000000454	VARS2	95	59.381	ENSACAG00000022093	VARS2	95	59.381	Anolis_carolinensis
ENSCAFG00000000454	VARS2	100	84.854	ENSANAG00000038018	VARS2	99	84.854	Aotus_nancymaae
ENSCAFG00000000454	VARS2	98	51.113	ENSACLG00000018673	vars2	99	51.113	Astatotilapia_calliptera
ENSCAFG00000000454	VARS2	97	53.102	ENSAMXG00000017773	vars2	96	55.255	Astyanax_mexicanus
ENSCAFG00000000454	VARS2	99	87.002	ENSBTAG00000010698	VARS2	99	86.874	Bos_taurus
ENSCAFG00000000454	VARS2	100	85.122	ENSCJAG00000019826	VARS2	99	85.122	Callithrix_jacchus
ENSCAFG00000000454	VARS2	87	100.000	ENSCAFG00020019387	VARS2	95	100.000	Canis_lupus_dingo
ENSCAFG00000000454	VARS2	99	86.730	ENSCHIG00000007847	VARS2	99	86.686	Capra_hircus
ENSCAFG00000000454	VARS2	99	85.066	ENSTSYG00000009904	VARS2	99	85.066	Carlito_syrichta
ENSCAFG00000000454	VARS2	88	82.581	ENSCAPG00000017770	VARS2	99	82.492	Cavia_aperea
ENSCAFG00000000454	VARS2	99	80.697	ENSCPOG00000021834	VARS2	99	80.697	Cavia_porcellus
ENSCAFG00000000454	VARS2	100	85.311	ENSCCAG00000037907	VARS2	99	85.311	Cebus_capucinus
ENSCAFG00000000454	VARS2	99	85.836	ENSCATG00000032554	VARS2	99	85.836	Cercocebus_atys
ENSCAFG00000000454	VARS2	99	81.485	ENSCLAG00000002889	VARS2	99	81.485	Chinchilla_lanigera
ENSCAFG00000000454	VARS2	99	85.647	ENSCSAG00000008327	VARS2	99	85.647	Chlorocebus_sabaeus
ENSCAFG00000000454	VARS2	91	62.795	ENSCPBG00000021502	VARS2	96	62.795	Chrysemys_picta_bellii
ENSCAFG00000000454	VARS2	99	85.647	ENSCANG00000014991	VARS2	99	85.647	Colobus_angolensis_palliatus
ENSCAFG00000000454	VARS2	99	81.602	ENSCGRG00001021535	Vars2	100	81.073	Cricetulus_griseus_chok1gshd
ENSCAFG00000000454	VARS2	99	81.602	ENSCGRG00000014112	Vars2	100	81.073	Cricetulus_griseus_crigri
ENSCAFG00000000454	VARS2	84	55.580	ENSCSEG00000015432	vars2	93	55.580	Cynoglossus_semilaevis
ENSCAFG00000000454	VARS2	66	52.646	ENSCVAG00000017765	vars2	99	52.646	Cyprinodon_variegatus
ENSCAFG00000000454	VARS2	95	52.810	ENSDARG00000056717	vars2	96	52.810	Danio_rerio
ENSCAFG00000000454	VARS2	79	84.899	ENSDORG00000008516	Vars2	93	84.899	Dipodomys_ordii
ENSCAFG00000000454	VARS2	99	74.645	ENSETEG00000014844	VARS2	99	74.645	Echinops_telfairi
ENSCAFG00000000454	VARS2	99	87.559	ENSEASG00005019997	VARS2	97	87.559	Equus_asinus_asinus
ENSCAFG00000000454	VARS2	99	88.878	ENSECAG00000018202	VARS2	99	88.878	Equus_caballus
ENSCAFG00000000454	VARS2	62	82.524	ENSEEUG00000012591	-	63	82.524	Erinaceus_europaeus
ENSCAFG00000000454	VARS2	93	52.780	ENSELUG00000017824	vars2	97	51.929	Esox_lucius
ENSCAFG00000000454	VARS2	100	89.736	ENSFCAG00000010531	VARS2	100	89.736	Felis_catus
ENSCAFG00000000454	VARS2	99	81.827	ENSFDAG00000017216	VARS2	99	81.827	Fukomys_damarensis
ENSCAFG00000000454	VARS2	84	52.902	ENSFHEG00000013932	vars2	94	50.515	Fundulus_heteroclitus
ENSCAFG00000000454	VARS2	89	55.637	ENSGMOG00000018960	vars2	99	55.637	Gadus_morhua
ENSCAFG00000000454	VARS2	72	51.134	ENSGAFG00000004737	vars2	88	51.134	Gambusia_affinis
ENSCAFG00000000454	VARS2	87	55.485	ENSGACG00000001464	vars2	99	54.260	Gasterosteus_aculeatus
ENSCAFG00000000454	VARS2	89	63.059	ENSGAGG00000011652	VARS2	97	63.059	Gopherus_agassizii
ENSCAFG00000000454	VARS2	99	85.269	ENSGGOG00000014587	VARS2	99	85.269	Gorilla_gorilla
ENSCAFG00000000454	VARS2	94	51.312	ENSHBUG00000002448	vars2	96	51.312	Haplochromis_burtoni
ENSCAFG00000000454	VARS2	99	80.979	ENSHGLG00000012886	VARS2	97	80.297	Heterocephalus_glaber_female
ENSCAFG00000000454	VARS2	99	80.791	ENSHGLG00100016535	VARS2	99	80.791	Heterocephalus_glaber_male
ENSCAFG00000000454	VARS2	68	50.000	ENSHCOG00000017907	vars2	94	52.550	Hippocampus_comes
ENSCAFG00000000454	VARS2	91	54.683	ENSIPUG00000015573	Vars2	96	53.558	Ictalurus_punctatus
ENSCAFG00000000454	VARS2	99	85.377	ENSSTOG00000009924	VARS2	99	85.377	Ictidomys_tridecemlineatus
ENSCAFG00000000454	VARS2	99	80.396	ENSJJAG00000011144	Vars2	99	80.396	Jaculus_jaculus
ENSCAFG00000000454	VARS2	94	52.422	ENSKMAG00000001393	vars2	97	52.125	Kryptolebias_marmoratus
ENSCAFG00000000454	VARS2	52	64.324	ENSLBEG00000005480	-	81	64.312	Labrus_bergylta
ENSCAFG00000000454	VARS2	95	51.877	ENSLBEG00000011949	vars2	96	51.469	Labrus_bergylta
ENSCAFG00000000454	VARS2	95	52.964	ENSLACG00000001576	-	99	53.061	Latimeria_chalumnae
ENSCAFG00000000454	VARS2	99	84.857	ENSLAFG00000015183	VARS2	99	84.857	Loxodonta_africana
ENSCAFG00000000454	VARS2	99	85.175	ENSMFAG00000042367	VARS2	99	85.175	Macaca_fascicularis
ENSCAFG00000000454	VARS2	99	85.269	ENSMMUG00000018609	VARS2	99	85.269	Macaca_mulatta
ENSCAFG00000000454	VARS2	99	85.647	ENSMNEG00000043163	VARS2	99	85.647	Macaca_nemestrina
ENSCAFG00000000454	VARS2	99	85.836	ENSMLEG00000041728	VARS2	98	84.902	Mandrillus_leucophaeus
ENSCAFG00000000454	VARS2	91	52.452	ENSMAMG00000020339	vars2	93	51.859	Mastacembelus_armatus
ENSCAFG00000000454	VARS2	98	51.020	ENSMZEG00005017669	vars2	99	51.020	Maylandia_zebra
ENSCAFG00000000454	VARS2	100	81.562	ENSMAUG00000018946	Vars2	100	81.562	Mesocricetus_auratus
ENSCAFG00000000454	VARS2	84	85.538	ENSMICG00000005365	VARS2	100	85.538	Microcebus_murinus
ENSCAFG00000000454	VARS2	94	83.879	ENSMOCG00000014607	Vars2	100	83.879	Microtus_ochrogaster
ENSCAFG00000000454	VARS2	91	52.632	ENSMMOG00000012122	vars2	98	50.710	Mola_mola
ENSCAFG00000000454	VARS2	99	75.212	ENSMODG00000015848	VARS2	99	75.212	Monodelphis_domestica
ENSCAFG00000000454	VARS2	90	53.185	ENSMALG00000009217	vars2	95	54.071	Monopterus_albus
ENSCAFG00000000454	VARS2	100	81.168	MGP_CAROLIEiJ_G0021529	Vars2	100	81.168	Mus_caroli
ENSCAFG00000000454	VARS2	100	81.168	ENSMUSG00000038838	Vars2	100	81.168	Mus_musculus
ENSCAFG00000000454	VARS2	100	82.015	MGP_PahariEiJ_G0020523	Vars2	100	82.015	Mus_pahari
ENSCAFG00000000454	VARS2	100	81.168	MGP_SPRETEiJ_G0022436	Vars2	100	81.168	Mus_spretus
ENSCAFG00000000454	VARS2	100	89.548	ENSMPUG00000011643	VARS2	100	89.548	Mustela_putorius_furo
ENSCAFG00000000454	VARS2	99	83.847	ENSMLUG00000002356	VARS2	98	82.949	Myotis_lucifugus
ENSCAFG00000000454	VARS2	98	76.000	ENSNGAG00000020607	Vars2	100	75.281	Nannospalax_galili
ENSCAFG00000000454	VARS2	69	52.486	ENSNBRG00000001624	vars2	61	52.762	Neolamprologus_brichardi
ENSCAFG00000000454	VARS2	99	81.964	ENSNLEG00000005625	VARS2	98	81.081	Nomascus_leucogenys
ENSCAFG00000000454	VARS2	78	74.290	ENSMEUG00000014475	VARS2	89	74.290	Notamacropus_eugenii
ENSCAFG00000000454	VARS2	89	78.591	ENSOPRG00000000682	VARS2	90	79.012	Ochotona_princeps
ENSCAFG00000000454	VARS2	99	79.868	ENSODEG00000017965	VARS2	99	79.868	Octodon_degus
ENSCAFG00000000454	VARS2	92	38.416	ENSONIG00000004734	vars2	98	38.319	Oreochromis_niloticus
ENSCAFG00000000454	VARS2	75	88.235	ENSOANG00000000398	-	98	88.235	Ornithorhynchus_anatinus
ENSCAFG00000000454	VARS2	99	78.459	ENSOCUG00000021496	VARS2	65	77.727	Oryctolagus_cuniculus
ENSCAFG00000000454	VARS2	90	53.846	ENSORLG00000010632	vars2	94	52.947	Oryzias_latipes
ENSCAFG00000000454	VARS2	92	52.611	ENSORLG00020018584	vars2	98	51.253	Oryzias_latipes_hni
ENSCAFG00000000454	VARS2	89	53.807	ENSORLG00015010408	vars2	92	52.783	Oryzias_latipes_hsok
ENSCAFG00000000454	VARS2	90	53.862	ENSOMEG00000008360	vars2	94	52.872	Oryzias_melastigma
ENSCAFG00000000454	VARS2	99	85.391	ENSOGAG00000006087	VARS2	97	85.391	Otolemur_garnettii
ENSCAFG00000000454	VARS2	99	85.795	ENSOARG00000010844	VARS2	98	85.755	Ovis_aries
ENSCAFG00000000454	VARS2	99	85.364	ENSPPAG00000041141	VARS2	99	85.364	Pan_paniscus
ENSCAFG00000000454	VARS2	100	89.266	ENSPPRG00000006751	VARS2	98	88.268	Panthera_pardus
ENSCAFG00000000454	VARS2	100	89.077	ENSPTIG00000017799	VARS2	98	90.663	Panthera_tigris_altaica
ENSCAFG00000000454	VARS2	99	85.364	ENSPTRG00000034497	VARS2	99	85.364	Pan_troglodytes
ENSCAFG00000000454	VARS2	99	86.025	ENSPANG00000018481	VARS2	100	85.963	Papio_anubis
ENSCAFG00000000454	VARS2	95	54.892	ENSPKIG00000011372	vars2	99	53.875	Paramormyrops_kingsleyae
ENSCAFG00000000454	VARS2	59	68.146	ENSPSIG00000006206	VARS2	92	67.593	Pelodiscus_sinensis
ENSCAFG00000000454	VARS2	97	52.830	ENSPMGG00000000465	vars2	98	52.830	Periophthalmus_magnuspinnatus
ENSCAFG00000000454	VARS2	100	81.356	ENSPEMG00000014691	Vars2	100	81.356	Peromyscus_maniculatus_bairdii
ENSCAFG00000000454	VARS2	99	76.543	ENSPCIG00000015040	VARS2	99	76.543	Phascolarctos_cinereus
ENSCAFG00000000454	VARS2	92	52.789	ENSPFOG00000017616	vars2	97	51.380	Poecilia_formosa
ENSCAFG00000000454	VARS2	92	52.433	ENSPLAG00000019778	vars2	99	50.371	Poecilia_latipinna
ENSCAFG00000000454	VARS2	92	52.433	ENSPMEG00000011123	vars2	97	51.094	Poecilia_mexicana
ENSCAFG00000000454	VARS2	88	47.884	ENSPREG00000014998	vars2	95	46.275	Poecilia_reticulata
ENSCAFG00000000454	VARS2	99	85.539	ENSPPYG00000016424	VARS2	99	85.539	Pongo_abelii
ENSCAFG00000000454	VARS2	84	79.633	ENSPCAG00000006946	VARS2	84	79.633	Procavia_capensis
ENSCAFG00000000454	VARS2	99	84.398	ENSPCOG00000014839	VARS2	98	83.457	Propithecus_coquereli
ENSCAFG00000000454	VARS2	99	85.458	ENSPVAG00000004197	VARS2	99	85.458	Pteropus_vampyrus
ENSCAFG00000000454	VARS2	82	60.054	ENSPNYG00000010314	vars2	99	60.054	Pundamilia_nyererei
ENSCAFG00000000454	VARS2	94	54.255	ENSPNAG00000026793	vars2	94	54.255	Pygocentrus_nattereri
ENSCAFG00000000454	VARS2	100	81.544	ENSRNOG00000000833	Vars2	100	81.544	Rattus_norvegicus
ENSCAFG00000000454	VARS2	99	85.552	ENSRBIG00000032725	VARS2	99	85.552	Rhinopithecus_bieti
ENSCAFG00000000454	VARS2	99	85.552	ENSRROG00000043847	VARS2	99	85.552	Rhinopithecus_roxellana
ENSCAFG00000000454	VARS2	100	82.934	ENSSBOG00000033240	VARS2	98	82.149	Saimiri_boliviensis_boliviensis
ENSCAFG00000000454	VARS2	99	75.024	ENSSHAG00000009307	VARS2	99	75.024	Sarcophilus_harrisii
ENSCAFG00000000454	VARS2	96	53.232	ENSSFOG00015016187	vars2	98	52.470	Scleropages_formosus
ENSCAFG00000000454	VARS2	92	53.854	ENSSMAG00000020842	vars2	97	52.722	Scophthalmus_maximus
ENSCAFG00000000454	VARS2	92	53.069	ENSSDUG00000011598	vars2	97	52.083	Seriola_dumerili
ENSCAFG00000000454	VARS2	90	53.244	ENSSLDG00000015492	vars2	96	51.152	Seriola_lalandi_dorsalis
ENSCAFG00000000454	VARS2	57	86.131	ENSSARG00000003786	-	69	86.131	Sorex_araneus
ENSCAFG00000000454	VARS2	88	59.658	ENSSPUG00000014700	VARS2	94	59.658	Sphenodon_punctatus
ENSCAFG00000000454	VARS2	93	50.449	ENSSPAG00000004654	vars2	97	49.237	Stegastes_partitus
ENSCAFG00000000454	VARS2	100	86.817	ENSSSCG00000001384	VARS2	100	86.817	Sus_scrofa
ENSCAFG00000000454	VARS2	90	55.098	ENSTRUG00000005264	vars2	97	53.793	Takifugu_rubripes
ENSCAFG00000000454	VARS2	95	52.632	ENSTNIG00000005916	vars2	96	52.647	Tetraodon_nigroviridis
ENSCAFG00000000454	VARS2	52	92.537	ENSTBEG00000007976	-	53	92.537	Tupaia_belangeri
ENSCAFG00000000454	VARS2	92	82.511	ENSTTRG00000012243	VARS2	93	82.511	Tursiops_truncatus
ENSCAFG00000000454	VARS2	100	88.899	ENSUAMG00000026124	VARS2	100	90.998	Ursus_americanus
ENSCAFG00000000454	VARS2	100	89.831	ENSUMAG00000019894	VARS2	100	89.831	Ursus_maritimus
ENSCAFG00000000454	VARS2	100	98.211	ENSVVUG00000010754	VARS2	95	98.211	Vulpes_vulpes
ENSCAFG00000000454	VARS2	89	55.301	ENSXETG00000003036	vars2	99	55.301	Xenopus_tropicalis
ENSCAFG00000000454	VARS2	88	54.193	ENSXCOG00000003455	vars2	95	52.753	Xiphophorus_couchianus
ENSCAFG00000000454	VARS2	92	52.122	ENSXMAG00000013523	vars2	97	50.804	Xiphophorus_maculatus