EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000000469 (Gene tree)
Gene ID: 481978
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 33688 bases
Position: chr13:365054-398741
Accession: 44815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000000694	POP1	PF06978.11	6.9e-39	1	2
ENSCAFP00000000694	POP1	PF06978.11	6.9e-39	2	2
ENSCAFP00000039863	POP1	PF06978.11	7.4e-39	1	2
ENSCAFP00000039863	POP1	PF06978.11	7.4e-39	2	2
ENSCAFP00000039863	POPLD	PF08170.12	9.8e-27	1	1
ENSCAFP00000000694	POPLD	PF08170.12	1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000000751	-	3075	-	ENSCAFP00000000694	1024 (aa)	-	F6UNG9
ENSCAFT00000046336	-	5088	XM_005627813	ENSCAFP00000039863	990 (aa)	XP_005627870	J9P2T5

Gene Model

Click here to download ENSCAFG00000000469's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG
cfa03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000469	POP1	100	81.250	ENSG00000104356	POP1	100	90.164	Homo_sapiens
ENSCAFG00000000469	POP1	100	49.277	ENSAPOG00000008198	pop1	100	49.277	Acanthochromis_polyacanthus
ENSCAFG00000000469	POP1	100	86.119	ENSAMEG00000000556	POP1	100	86.119	Ailuropoda_melanoleuca
ENSCAFG00000000469	POP1	100	47.332	ENSACIG00000004169	POP1	100	47.925	Amphilophus_citrinellus
ENSCAFG00000000469	POP1	100	48.400	ENSAOCG00000010991	pop1	100	48.735	Amphiprion_ocellaris
ENSCAFG00000000469	POP1	91	48.132	ENSAPEG00000007607	pop1	96	48.929	Amphiprion_percula
ENSCAFG00000000469	POP1	100	46.273	ENSATEG00000024814	POP1	100	46.273	Anabas_testudineus
ENSCAFG00000000469	POP1	92	62.513	ENSAPLG00000014418	POP1	100	62.513	Anas_platyrhynchos
ENSCAFG00000000469	POP1	100	56.420	ENSACAG00000016083	POP1	100	56.323	Anolis_carolinensis
ENSCAFG00000000469	POP1	89	86.944	ENSANAG00000026360	POP1	100	86.944	Aotus_nancymaae
ENSCAFG00000000469	POP1	100	48.141	ENSACLG00000010951	pop1	100	48.141	Astatotilapia_calliptera
ENSCAFG00000000469	POP1	100	47.243	ENSAMXG00000014483	POP1	100	47.243	Astyanax_mexicanus
ENSCAFG00000000469	POP1	100	78.663	ENSBTAG00000012596	POP1	100	79.548	Bos_taurus
ENSCAFG00000000469	POP1	100	79.395	ENSCJAG00000015567	POP1	100	79.395	Callithrix_jacchus
ENSCAFG00000000469	POP1	100	97.461	ENSCAFG00020026765	POP1	100	97.461	Canis_lupus_dingo
ENSCAFG00000000469	POP1	100	79.470	ENSCHIG00000017066	POP1	100	79.568	Capra_hircus
ENSCAFG00000000469	POP1	100	79.590	ENSTSYG00000003097	POP1	100	79.590	Carlito_syrichta
ENSCAFG00000000469	POP1	100	74.658	ENSCAPG00000007251	POP1	100	74.853	Cavia_aperea
ENSCAFG00000000469	POP1	100	77.188	ENSCPOG00000002901	POP1	100	77.384	Cavia_porcellus
ENSCAFG00000000469	POP1	100	79.883	ENSCCAG00000018939	POP1	94	87.830	Cebus_capucinus
ENSCAFG00000000469	POP1	100	80.469	ENSCATG00000040916	POP1	100	80.469	Cercocebus_atys
ENSCAFG00000000469	POP1	100	79.646	ENSCLAG00000007208	POP1	97	79.646	Chinchilla_lanigera
ENSCAFG00000000469	POP1	90	80.477	ENSCSAG00000012340	POP1	99	80.477	Chlorocebus_sabaeus
ENSCAFG00000000469	POP1	95	75.487	ENSCHOG00000011432	POP1	100	75.487	Choloepus_hoffmanni
ENSCAFG00000000469	POP1	100	65.209	ENSCPBG00000006373	POP1	100	65.209	Chrysemys_picta_bellii
ENSCAFG00000000469	POP1	80	33.762	ENSCING00000008323	-	95	33.645	Ciona_intestinalis
ENSCAFG00000000469	POP1	100	80.664	ENSCANG00000001647	POP1	100	80.664	Colobus_angolensis_palliatus
ENSCAFG00000000469	POP1	100	74.209	ENSCGRG00001017308	Pop1	100	74.209	Cricetulus_griseus_chok1gshd
ENSCAFG00000000469	POP1	100	68.676	ENSCGRG00000010824	Pop1	100	68.676	Cricetulus_griseus_crigri
ENSCAFG00000000469	POP1	100	46.229	ENSCSEG00000008737	POP1	100	46.621	Cynoglossus_semilaevis
ENSCAFG00000000469	POP1	100	48.524	ENSCVAG00000022248	pop1	100	48.524	Cyprinodon_variegatus
ENSCAFG00000000469	POP1	100	75.640	ENSDNOG00000019974	POP1	100	75.640	Dasypus_novemcinctus
ENSCAFG00000000469	POP1	100	67.679	ENSDORG00000015384	Pop1	100	67.679	Dipodomys_ordii
ENSCAFG00000000469	POP1	63	33.071	FBgn0026702	l(1)G0045	71	33.077	Drosophila_melanogaster
ENSCAFG00000000469	POP1	88	69.123	ENSETEG00000007839	POP1	88	69.123	Echinops_telfairi
ENSCAFG00000000469	POP1	53	43.633	ENSEBUG00000009897	pop1	96	43.633	Eptatretus_burgeri
ENSCAFG00000000469	POP1	100	83.874	ENSEASG00005003189	POP1	98	83.874	Equus_asinus_asinus
ENSCAFG00000000469	POP1	100	83.972	ENSECAG00000024236	POP1	100	83.972	Equus_caballus
ENSCAFG00000000469	POP1	66	80.556	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSCAFG00000000469	POP1	100	48.710	ENSELUG00000003526	pop1	100	49.107	Esox_lucius
ENSCAFG00000000469	POP1	100	86.726	ENSFCAG00000002168	POP1	100	86.726	Felis_catus
ENSCAFG00000000469	POP1	100	59.007	ENSFALG00000005711	POP1	100	59.961	Ficedula_albicollis
ENSCAFG00000000469	POP1	100	78.550	ENSFDAG00000017068	POP1	100	78.550	Fukomys_damarensis
ENSCAFG00000000469	POP1	100	47.633	ENSFHEG00000019518	pop1	100	47.882	Fundulus_heteroclitus
ENSCAFG00000000469	POP1	95	46.585	ENSGMOG00000000659	POP1	99	46.694	Gadus_morhua
ENSCAFG00000000469	POP1	100	48.571	ENSGAFG00000019770	POP1	100	48.571	Gambusia_affinis
ENSCAFG00000000469	POP1	100	45.881	ENSGACG00000003499	pop1	100	45.977	Gasterosteus_aculeatus
ENSCAFG00000000469	POP1	100	63.861	ENSGAGG00000011737	POP1	98	64.059	Gopherus_agassizii
ENSCAFG00000000469	POP1	100	80.859	ENSGGOG00000003176	POP1	100	80.859	Gorilla_gorilla
ENSCAFG00000000469	POP1	100	48.141	ENSHBUG00000021583	pop1	100	48.141	Haplochromis_burtoni
ENSCAFG00000000469	POP1	100	78.104	ENSHGLG00000006029	POP1	100	78.104	Heterocephalus_glaber_female
ENSCAFG00000000469	POP1	100	78.104	ENSHGLG00100016879	POP1	100	78.104	Heterocephalus_glaber_male
ENSCAFG00000000469	POP1	90	49.731	ENSHCOG00000013888	pop1	96	49.731	Hippocampus_comes
ENSCAFG00000000469	POP1	100	46.038	ENSIPUG00000018336	pop1	100	46.038	Ictalurus_punctatus
ENSCAFG00000000469	POP1	100	78.824	ENSSTOG00000011455	POP1	97	78.824	Ictidomys_tridecemlineatus
ENSCAFG00000000469	POP1	100	74.875	ENSJJAG00000013325	Pop1	100	74.875	Jaculus_jaculus
ENSCAFG00000000469	POP1	100	48.617	ENSKMAG00000001346	POP1	100	48.715	Kryptolebias_marmoratus
ENSCAFG00000000469	POP1	89	49.552	ENSLBEG00000024457	POP1	95	49.231	Labrus_bergylta
ENSCAFG00000000469	POP1	93	56.057	ENSLACG00000012498	POP1	99	56.263	Latimeria_chalumnae
ENSCAFG00000000469	POP1	100	51.074	ENSLOCG00000009817	POP1	100	51.224	Lepisosteus_oculatus
ENSCAFG00000000469	POP1	100	80.411	ENSLAFG00000010770	POP1	100	80.411	Loxodonta_africana
ENSCAFG00000000469	POP1	100	80.664	ENSMFAG00000000347	POP1	100	80.664	Macaca_fascicularis
ENSCAFG00000000469	POP1	100	80.469	ENSMNEG00000036870	POP1	100	80.469	Macaca_nemestrina
ENSCAFG00000000469	POP1	100	80.566	ENSMLEG00000034986	POP1	100	80.566	Mandrillus_leucophaeus
ENSCAFG00000000469	POP1	100	47.801	ENSMAMG00000004040	pop1	100	47.996	Mastacembelus_armatus
ENSCAFG00000000469	POP1	100	48.141	ENSMZEG00005025448	pop1	100	48.141	Maylandia_zebra
ENSCAFG00000000469	POP1	100	58.397	ENSMGAG00000012167	POP1	100	58.935	Meleagris_gallopavo
ENSCAFG00000000469	POP1	100	74.063	ENSMAUG00000017537	Pop1	100	74.063	Mesocricetus_auratus
ENSCAFG00000000469	POP1	100	80.156	ENSMICG00000004361	POP1	100	80.156	Microcebus_murinus
ENSCAFG00000000469	POP1	100	73.622	ENSMOCG00000006356	Pop1	100	74.016	Microtus_ochrogaster
ENSCAFG00000000469	POP1	100	44.356	ENSMMOG00000018242	pop1	100	44.356	Mola_mola
ENSCAFG00000000469	POP1	100	67.957	ENSMODG00000006561	POP1	100	68.054	Monodelphis_domestica
ENSCAFG00000000469	POP1	100	48.880	ENSMALG00000012621	POP1	100	48.880	Monopterus_albus
ENSCAFG00000000469	POP1	100	72.620	MGP_CAROLIEiJ_G0019726	Pop1	100	72.620	Mus_caroli
ENSCAFG00000000469	POP1	100	73.111	ENSMUSG00000022325	Pop1	100	73.111	Mus_musculus
ENSCAFG00000000469	POP1	100	73.498	MGP_PahariEiJ_G0019735	Pop1	100	73.498	Mus_pahari
ENSCAFG00000000469	POP1	100	72.816	MGP_SPRETEiJ_G0020622	Pop1	100	72.816	Mus_spretus
ENSCAFG00000000469	POP1	100	87.659	ENSMPUG00000015250	POP1	100	87.659	Mustela_putorius_furo
ENSCAFG00000000469	POP1	100	77.996	ENSMLUG00000010204	POP1	100	77.996	Myotis_lucifugus
ENSCAFG00000000469	POP1	100	75.977	ENSNGAG00000001582	Pop1	100	75.977	Nannospalax_galili
ENSCAFG00000000469	POP1	89	49.219	ENSNBRG00000002356	pop1	94	49.394	Neolamprologus_brichardi
ENSCAFG00000000469	POP1	100	80.273	ENSNLEG00000002541	POP1	100	80.273	Nomascus_leucogenys
ENSCAFG00000000469	POP1	93	59.812	ENSMEUG00000003118	POP1	98	59.812	Notamacropus_eugenii
ENSCAFG00000000469	POP1	100	75.420	ENSOPRG00000007667	POP1	100	75.420	Ochotona_princeps
ENSCAFG00000000469	POP1	100	77.647	ENSODEG00000003984	POP1	100	77.647	Octodon_degus
ENSCAFG00000000469	POP1	100	48.577	ENSONIG00000016445	pop1	100	48.577	Oreochromis_niloticus
ENSCAFG00000000469	POP1	61	68.098	ENSOANG00000001278	-	94	68.098	Ornithorhynchus_anatinus
ENSCAFG00000000469	POP1	100	77.154	ENSOCUG00000017400	POP1	100	77.154	Oryctolagus_cuniculus
ENSCAFG00000000469	POP1	92	50.542	ENSORLG00000002839	pop1	100	48.608	Oryzias_latipes
ENSCAFG00000000469	POP1	90	49.836	ENSORLG00020022450	POP1	96	50.055	Oryzias_latipes_hni
ENSCAFG00000000469	POP1	100	48.115	ENSORLG00015012746	POP1	100	48.606	Oryzias_latipes_hsok
ENSCAFG00000000469	POP1	100	48.300	ENSOMEG00000006915	pop1	99	48.400	Oryzias_melastigma
ENSCAFG00000000469	POP1	100	78.592	ENSOGAG00000001466	POP1	100	78.592	Otolemur_garnettii
ENSCAFG00000000469	POP1	100	81.329	ENSPPAG00000018410	POP1	100	81.329	Pan_paniscus
ENSCAFG00000000469	POP1	100	86.739	ENSPPRG00000005002	POP1	100	86.739	Panthera_pardus
ENSCAFG00000000469	POP1	100	86.739	ENSPTIG00000016527	POP1	100	86.739	Panthera_tigris_altaica
ENSCAFG00000000469	POP1	100	81.250	ENSPTRG00000020458	POP1	100	81.250	Pan_troglodytes
ENSCAFG00000000469	POP1	100	80.841	ENSPANG00000009704	POP1	100	80.841	Papio_anubis
ENSCAFG00000000469	POP1	100	50.690	ENSPKIG00000016325	POP1	100	50.690	Paramormyrops_kingsleyae
ENSCAFG00000000469	POP1	100	63.127	ENSPSIG00000012343	POP1	100	63.127	Pelodiscus_sinensis
ENSCAFG00000000469	POP1	89	50.548	ENSPMGG00000022253	POP1	95	49.947	Periophthalmus_magnuspinnatus
ENSCAFG00000000469	POP1	99	73.025	ENSPEMG00000023633	Pop1	100	73.025	Peromyscus_maniculatus_bairdii
ENSCAFG00000000469	POP1	90	42.887	ENSPMAG00000003209	POP1	100	43.309	Petromyzon_marinus
ENSCAFG00000000469	POP1	100	66.473	ENSPCIG00000012216	POP1	100	66.860	Phascolarctos_cinereus
ENSCAFG00000000469	POP1	100	49.153	ENSPFOG00000012490	POP1	100	49.153	Poecilia_formosa
ENSCAFG00000000469	POP1	100	49.002	ENSPLAG00000004646	POP1	100	49.002	Poecilia_latipinna
ENSCAFG00000000469	POP1	100	49.452	ENSPMEG00000019592	POP1	100	49.452	Poecilia_mexicana
ENSCAFG00000000469	POP1	100	49.202	ENSPREG00000020951	POP1	100	49.202	Poecilia_reticulata
ENSCAFG00000000469	POP1	100	80.957	ENSPPYG00000018777	POP1	100	80.957	Pongo_abelii
ENSCAFG00000000469	POP1	100	74.975	ENSPCAG00000016662	POP1	100	74.975	Procavia_capensis
ENSCAFG00000000469	POP1	100	80.938	ENSPCOG00000019420	POP1	100	80.938	Propithecus_coquereli
ENSCAFG00000000469	POP1	100	81.384	ENSPVAG00000014468	POP1	100	81.434	Pteropus_vampyrus
ENSCAFG00000000469	POP1	89	49.776	ENSPNYG00000004476	pop1	95	50.000	Pundamilia_nyererei
ENSCAFG00000000469	POP1	100	46.992	ENSPNAG00000000265	pop1	100	46.992	Pygocentrus_nattereri
ENSCAFG00000000469	POP1	100	72.843	ENSRNOG00000005243	Pop1	100	72.843	Rattus_norvegicus
ENSCAFG00000000469	POP1	100	80.566	ENSRBIG00000007996	POP1	100	80.566	Rhinopithecus_bieti
ENSCAFG00000000469	POP1	100	80.664	ENSRROG00000012334	POP1	100	80.664	Rhinopithecus_roxellana
ENSCAFG00000000469	POP1	99	80.712	ENSSBOG00000020830	POP1	100	80.712	Saimiri_boliviensis_boliviensis
ENSCAFG00000000469	POP1	100	68.354	ENSSHAG00000000296	POP1	100	68.354	Sarcophilus_harrisii
ENSCAFG00000000469	POP1	100	49.164	ENSSFOG00015007429	pop1	99	49.164	Scleropages_formosus
ENSCAFG00000000469	POP1	93	48.401	ENSSMAG00000010467	POP1	98	48.827	Scophthalmus_maximus
ENSCAFG00000000469	POP1	100	47.522	ENSSDUG00000007817	POP1	100	47.522	Seriola_dumerili
ENSCAFG00000000469	POP1	100	47.911	ENSSLDG00000012565	POP1	100	48.008	Seriola_lalandi_dorsalis
ENSCAFG00000000469	POP1	100	58.685	ENSSPUG00000003550	-	100	58.685	Sphenodon_punctatus
ENSCAFG00000000469	POP1	90	50.000	ENSSPAG00000014955	pop1	94	50.333	Stegastes_partitus
ENSCAFG00000000469	POP1	100	80.454	ENSSSCG00000006078	POP1	100	80.454	Sus_scrofa
ENSCAFG00000000469	POP1	92	56.443	ENSTGUG00000012011	-	100	56.443	Taeniopygia_guttata
ENSCAFG00000000469	POP1	91	48.743	ENSTRUG00000010856	pop1	94	48.743	Takifugu_rubripes
ENSCAFG00000000469	POP1	93	48.387	ENSTNIG00000013297	pop1	99	48.387	Tetraodon_nigroviridis
ENSCAFG00000000469	POP1	95	75.229	ENSTBEG00000014214	POP1	100	75.229	Tupaia_belangeri
ENSCAFG00000000469	POP1	100	79.610	ENSTTRG00000016071	POP1	100	79.610	Tursiops_truncatus
ENSCAFG00000000469	POP1	99	82.306	ENSUAMG00000017309	POP1	100	82.306	Ursus_americanus
ENSCAFG00000000469	POP1	100	84.893	ENSUMAG00000016952	POP1	100	93.522	Ursus_maritimus
ENSCAFG00000000469	POP1	85	86.447	ENSVPAG00000008278	POP1	82	86.447	Vicugna_pacos
ENSCAFG00000000469	POP1	100	96.191	ENSVVUG00000010994	POP1	100	96.191	Vulpes_vulpes
ENSCAFG00000000469	POP1	100	43.564	ENSXCOG00000017043	POP1	100	43.992	Xiphophorus_couchianus
ENSCAFG00000000469	POP1	100	48.406	ENSXMAG00000002472	POP1	100	48.406	Xiphophorus_maculatus