EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000000636 (Gene tree)
Gene ID: 481716
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 15404 bases
Position: chr12:1253967-1269370
Accession: 48231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000000899	tRNA-synt_1g	PF09334.11	4.5e-11	1	1
ENSCAFP00000037982	tRNA-synt_1g	PF09334.11	4.5e-11	1	1
ENSCAFP00000000899	Anticodon_1	PF08264.13	4.7e-34	1	1
ENSCAFP00000037982	Anticodon_1	PF08264.13	4.7e-34	1	1
ENSCAFP00000000899	tRNA-synt_1	PF00133.22	5.7e-202	1	1
ENSCAFP00000037982	tRNA-synt_1	PF00133.22	5.7e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000000982	-	3795	-	ENSCAFP00000000899	1264 (aa)	-	E2RTJ7
ENSCAFT00000049788	-	5166	XM_005627162	ENSCAFP00000037982	1264 (aa)	XP_538837	E2RTJ7

Gene Model

Click here to download ENSCAFG00000000636's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000000636	VARS	82	49.713	ENSCAFG00000000454	VARS2	92	51.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000636	VARS	100	94.462	ENSG00000204394	VARS	100	97.126	Homo_sapiens
ENSCAFG00000000636	VARS	98	64.498	ENSAPOG00000020921	vars	99	64.096	Acanthochromis_polyacanthus
ENSCAFG00000000636	VARS	98	64.498	ENSAPOG00000020691	vars	99	64.096	Acanthochromis_polyacanthus
ENSCAFG00000000636	VARS	100	96.285	ENSAMEG00000006417	VARS	100	96.285	Ailuropoda_melanoleuca
ENSCAFG00000000636	VARS	100	65.364	ENSACIG00000013752	vars	100	65.306	Amphilophus_citrinellus
ENSCAFG00000000636	VARS	100	64.546	ENSAOCG00000002447	vars	100	63.887	Amphiprion_ocellaris
ENSCAFG00000000636	VARS	100	64.391	ENSAPEG00000010638	vars	99	64.408	Amphiprion_percula
ENSCAFG00000000636	VARS	100	63.608	ENSATEG00000020219	vars	100	64.381	Anabas_testudineus
ENSCAFG00000000636	VARS	90	70.772	ENSACAG00000029133	-	99	70.598	Anolis_carolinensis
ENSCAFG00000000636	VARS	100	94.541	ENSANAG00000015453	VARS	100	94.541	Aotus_nancymaae
ENSCAFG00000000636	VARS	100	64.551	ENSACLG00000025699	vars	97	64.491	Astatotilapia_calliptera
ENSCAFG00000000636	VARS	94	66.138	ENSAMXG00000017716	vars	95	66.138	Astyanax_mexicanus
ENSCAFG00000000636	VARS	100	94.541	ENSBTAG00000005631	VARS	100	94.541	Bos_taurus
ENSCAFG00000000636	VARS	100	94.225	ENSCJAG00000002604	VARS	100	94.225	Callithrix_jacchus
ENSCAFG00000000636	VARS	94	99.831	ENSCAFG00020020790	VARS	96	99.831	Canis_lupus_dingo
ENSCAFG00000000636	VARS	100	94.778	ENSCHIG00000011008	VARS	100	94.778	Capra_hircus
ENSCAFG00000000636	VARS	100	94.541	ENSTSYG00000001567	VARS	100	94.541	Carlito_syrichta
ENSCAFG00000000636	VARS	91	89.965	ENSCAPG00000013736	VARS	99	89.965	Cavia_aperea
ENSCAFG00000000636	VARS	100	90.744	ENSCPOG00000000870	VARS	100	90.744	Cavia_porcellus
ENSCAFG00000000636	VARS	100	94.383	ENSCCAG00000035656	VARS	100	94.776	Cebus_capucinus
ENSCAFG00000000636	VARS	100	94.462	ENSCATG00000022394	VARS	100	94.462	Cercocebus_atys
ENSCAFG00000000636	VARS	88	88.569	ENSCLAG00000009470	VARS	92	88.569	Chinchilla_lanigera
ENSCAFG00000000636	VARS	100	94.541	ENSCSAG00000008784	VARS	100	94.541	Chlorocebus_sabaeus
ENSCAFG00000000636	VARS	78	73.829	ENSCPBG00000007943	VARS	96	74.127	Chrysemys_picta_bellii
ENSCAFG00000000636	VARS	100	94.462	ENSCANG00000033570	VARS	100	94.462	Colobus_angolensis_palliatus
ENSCAFG00000000636	VARS	100	92.247	ENSCGRG00001005686	Vars	100	92.247	Cricetulus_griseus_chok1gshd
ENSCAFG00000000636	VARS	92	87.270	ENSCGRG00000013352	Vars	78	87.270	Cricetulus_griseus_crigri
ENSCAFG00000000636	VARS	100	63.708	ENSCSEG00000019652	vars	100	63.786	Cynoglossus_semilaevis
ENSCAFG00000000636	VARS	100	64.861	ENSCVAG00000022398	vars	100	64.802	Cyprinodon_variegatus
ENSCAFG00000000636	VARS	100	64.369	ENSDARG00000044575	vars	100	64.363	Danio_rerio
ENSCAFG00000000636	VARS	84	92.004	ENSDORG00000016433	Vars	95	92.004	Dipodomys_ordii
ENSCAFG00000000636	VARS	69	86.076	ENSETEG00000003824	VARS	77	86.076	Echinops_telfairi
ENSCAFG00000000636	VARS	57	61.951	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSCAFG00000000636	VARS	50	70.780	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSCAFG00000000636	VARS	100	95.491	ENSEASG00005015673	VARS	100	95.491	Equus_asinus_asinus
ENSCAFG00000000636	VARS	100	94.545	ENSECAG00000014620	VARS	100	94.941	Equus_caballus
ENSCAFG00000000636	VARS	83	92.042	ENSEEUG00000004116	VARS	83	92.042	Erinaceus_europaeus
ENSCAFG00000000636	VARS	100	63.840	ENSELUG00000006550	vars	97	63.917	Esox_lucius
ENSCAFG00000000636	VARS	100	95.570	ENSFCAG00000004510	VARS	100	95.570	Felis_catus
ENSCAFG00000000636	VARS	82	91.237	ENSFDAG00000011401	VARS	100	91.237	Fukomys_damarensis
ENSCAFG00000000636	VARS	100	64.861	ENSFHEG00000010672	vars	100	64.957	Fundulus_heteroclitus
ENSCAFG00000000636	VARS	92	65.724	ENSGMOG00000014908	vars	97	65.724	Gadus_morhua
ENSCAFG00000000636	VARS	100	65.194	ENSGAFG00000021630	vars	100	65.136	Gambusia_affinis
ENSCAFG00000000636	VARS	92	66.416	ENSGACG00000009601	vars	98	66.000	Gasterosteus_aculeatus
ENSCAFG00000000636	VARS	50	65.245	ENSGAGG00000006508	-	91	64.771	Gopherus_agassizii
ENSCAFG00000000636	VARS	100	94.383	ENSGGOG00000011364	VARS	100	94.383	Gorilla_gorilla
ENSCAFG00000000636	VARS	100	64.551	ENSHBUG00000017151	vars	97	64.491	Haplochromis_burtoni
ENSCAFG00000000636	VARS	100	89.953	ENSHGLG00000011646	VARS	100	89.794	Heterocephalus_glaber_female
ENSCAFG00000000636	VARS	93	82.807	ENSHGLG00100018062	VARS	100	82.807	Heterocephalus_glaber_male
ENSCAFG00000000636	VARS	99	64.419	ENSHCOG00000012198	vars	99	64.358	Hippocampus_comes
ENSCAFG00000000636	VARS	100	65.058	ENSIPUG00000005218	vars	100	65.058	Ictalurus_punctatus
ENSCAFG00000000636	VARS	100	93.676	ENSSTOG00000013112	VARS	100	93.676	Ictidomys_tridecemlineatus
ENSCAFG00000000636	VARS	100	91.139	ENSJJAG00000019749	-	100	90.665	Jaculus_jaculus
ENSCAFG00000000636	VARS	100	72.073	ENSJJAG00000015343	-	99	73.253	Jaculus_jaculus
ENSCAFG00000000636	VARS	100	64.650	ENSKMAG00000009455	vars	100	64.650	Kryptolebias_marmoratus
ENSCAFG00000000636	VARS	100	63.241	ENSLBEG00000010341	vars	100	63.902	Labrus_bergylta
ENSCAFG00000000636	VARS	94	61.873	ENSLACG00000015232	VARS	99	62.202	Latimeria_chalumnae
ENSCAFG00000000636	VARS	100	66.484	ENSLOCG00000004240	vars	100	66.406	Lepisosteus_oculatus
ENSCAFG00000000636	VARS	100	93.196	ENSLAFG00000023090	VARS	100	92.959	Loxodonta_africana
ENSCAFG00000000636	VARS	100	94.541	ENSMFAG00000001032	VARS	100	94.541	Macaca_fascicularis
ENSCAFG00000000636	VARS	100	94.541	ENSMMUG00000006828	VARS	100	94.541	Macaca_mulatta
ENSCAFG00000000636	VARS	100	94.699	ENSMNEG00000042072	VARS	100	94.699	Macaca_nemestrina
ENSCAFG00000000636	VARS	100	94.620	ENSMLEG00000039307	VARS	100	94.620	Mandrillus_leucophaeus
ENSCAFG00000000636	VARS	100	64.391	ENSMAMG00000003949	vars	100	64.486	Mastacembelus_armatus
ENSCAFG00000000636	VARS	100	64.551	ENSMZEG00005018327	vars	100	64.246	Maylandia_zebra
ENSCAFG00000000636	VARS	100	91.851	ENSMAUG00000006715	Vars	100	91.851	Mesocricetus_auratus
ENSCAFG00000000636	VARS	100	92.959	ENSMICG00000003548	VARS	100	94.030	Microcebus_murinus
ENSCAFG00000000636	VARS	100	89.003	ENSMOCG00000015404	Vars	100	88.845	Microtus_ochrogaster
ENSCAFG00000000636	VARS	100	64.129	ENSMMOG00000015801	vars	100	63.972	Mola_mola
ENSCAFG00000000636	VARS	100	85.918	ENSMODG00000015204	-	100	85.918	Monodelphis_domestica
ENSCAFG00000000636	VARS	99	64.539	ENSMALG00000022532	vars	99	64.363	Monopterus_albus
ENSCAFG00000000636	VARS	100	92.563	MGP_CAROLIEiJ_G0021491	Vars	100	92.405	Mus_caroli
ENSCAFG00000000636	VARS	100	92.563	ENSMUSG00000007029	Vars	100	92.405	Mus_musculus
ENSCAFG00000000636	VARS	100	92.247	MGP_PahariEiJ_G0020486	Vars	100	92.168	Mus_pahari
ENSCAFG00000000636	VARS	100	92.642	MGP_SPRETEiJ_G0022396	Vars	100	92.484	Mus_spretus
ENSCAFG00000000636	VARS	100	96.282	ENSMPUG00000010821	VARS	100	96.282	Mustela_putorius_furo
ENSCAFG00000000636	VARS	78	93.016	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSCAFG00000000636	VARS	100	91.535	ENSNGAG00000012151	Vars	100	91.930	Nannospalax_galili
ENSCAFG00000000636	VARS	100	64.319	ENSNBRG00000020520	vars	100	64.258	Neolamprologus_brichardi
ENSCAFG00000000636	VARS	100	93.908	ENSNLEG00000006351	VARS	100	93.908	Nomascus_leucogenys
ENSCAFG00000000636	VARS	100	82.437	ENSMEUG00000011378	VARS	100	82.437	Notamacropus_eugenii
ENSCAFG00000000636	VARS	100	92.405	ENSOPRG00000003607	VARS	100	92.405	Ochotona_princeps
ENSCAFG00000000636	VARS	100	90.269	ENSODEG00000017681	VARS	100	89.953	Octodon_degus
ENSCAFG00000000636	VARS	100	64.871	ENSONIG00000013064	vars	99	67.652	Oreochromis_niloticus
ENSCAFG00000000636	VARS	77	78.478	ENSOANG00000005400	VARS	98	77.765	Ornithorhynchus_anatinus
ENSCAFG00000000636	VARS	100	90.521	ENSOCUG00000022463	VARS	100	90.758	Oryctolagus_cuniculus
ENSCAFG00000000636	VARS	100	64.724	ENSORLG00000013063	vars	100	64.665	Oryzias_latipes
ENSCAFG00000000636	VARS	100	65.251	ENSORLG00020003504	vars	100	65.271	Oryzias_latipes_hni
ENSCAFG00000000636	VARS	100	65.150	ENSORLG00015009001	vars	100	65.093	Oryzias_latipes_hsok
ENSCAFG00000000636	VARS	100	64.992	ENSOMEG00000015016	vars	100	64.934	Oryzias_melastigma
ENSCAFG00000000636	VARS	100	93.275	ENSOGAG00000007515	VARS	100	93.275	Otolemur_garnettii
ENSCAFG00000000636	VARS	100	94.620	ENSPPAG00000034012	VARS	100	94.620	Pan_paniscus
ENSCAFG00000000636	VARS	100	95.886	ENSPPRG00000014855	VARS	100	95.886	Panthera_pardus
ENSCAFG00000000636	VARS	85	96.097	ENSPTIG00000010462	VARS	95	96.062	Panthera_tigris_altaica
ENSCAFG00000000636	VARS	100	94.541	ENSPTRG00000017985	VARS	100	94.541	Pan_troglodytes
ENSCAFG00000000636	VARS	100	92.902	ENSPANG00000014565	VARS	100	92.902	Papio_anubis
ENSCAFG00000000636	VARS	100	63.580	ENSPKIG00000016304	vars	100	63.580	Paramormyrops_kingsleyae
ENSCAFG00000000636	VARS	100	65.406	ENSPMGG00000023909	vars	100	65.485	Periophthalmus_magnuspinnatus
ENSCAFG00000000636	VARS	100	92.801	ENSPEMG00000006639	Vars	100	92.801	Peromyscus_maniculatus_bairdii
ENSCAFG00000000636	VARS	100	85.522	ENSPCIG00000018553	VARS	100	85.522	Phascolarctos_cinereus
ENSCAFG00000000636	VARS	100	65.349	ENSPFOG00000015690	vars	100	65.292	Poecilia_formosa
ENSCAFG00000000636	VARS	100	66.011	ENSPLAG00000009590	vars	100	65.696	Poecilia_latipinna
ENSCAFG00000000636	VARS	100	65.349	ENSPMEG00000004708	vars	100	65.292	Poecilia_mexicana
ENSCAFG00000000636	VARS	100	63.937	ENSPREG00000013264	vars	100	63.858	Poecilia_reticulata
ENSCAFG00000000636	VARS	100	92.722	ENSPPYG00000016460	VARS	100	92.722	Pongo_abelii
ENSCAFG00000000636	VARS	86	92.280	ENSPCAG00000013565	VARS	86	92.280	Procavia_capensis
ENSCAFG00000000636	VARS	100	93.597	ENSPCOG00000010942	VARS	100	93.992	Propithecus_coquereli
ENSCAFG00000000636	VARS	100	90.744	ENSPVAG00000012403	VARS	100	90.744	Pteropus_vampyrus
ENSCAFG00000000636	VARS	100	64.551	ENSPNYG00000022511	vars	100	64.491	Pundamilia_nyererei
ENSCAFG00000000636	VARS	100	64.601	ENSPNAG00000020962	vars	100	64.624	Pygocentrus_nattereri
ENSCAFG00000000636	VARS	100	93.038	ENSRNOG00000000867	Vars	100	93.038	Rattus_norvegicus
ENSCAFG00000000636	VARS	100	94.620	ENSRBIG00000041669	VARS	100	94.620	Rhinopithecus_bieti
ENSCAFG00000000636	VARS	100	94.620	ENSRROG00000045490	VARS	100	94.620	Rhinopithecus_roxellana
ENSCAFG00000000636	VARS	100	93.908	ENSSBOG00000035402	VARS	100	93.908	Saimiri_boliviensis_boliviensis
ENSCAFG00000000636	VARS	100	81.383	ENSSHAG00000006937	VARS	100	81.618	Sarcophilus_harrisii
ENSCAFG00000000636	VARS	100	64.219	ENSSFOG00015014272	vars	100	64.142	Scleropages_formosus
ENSCAFG00000000636	VARS	100	63.411	ENSSMAG00000009596	vars	99	63.460	Scophthalmus_maximus
ENSCAFG00000000636	VARS	100	64.297	ENSSDUG00000014177	vars	100	64.391	Seriola_dumerili
ENSCAFG00000000636	VARS	100	64.374	ENSSLDG00000025316	vars	100	64.469	Seriola_lalandi_dorsalis
ENSCAFG00000000636	VARS	100	64.646	ENSSPAG00000017068	vars	100	64.720	Stegastes_partitus
ENSCAFG00000000636	VARS	100	92.964	ENSSSCG00000038950	VARS	100	93.360	Sus_scrofa
ENSCAFG00000000636	VARS	81	64.660	ENSTRUG00000012307	vars	96	64.507	Takifugu_rubripes
ENSCAFG00000000636	VARS	100	64.867	ENSTNIG00000008011	vars	100	64.784	Tetraodon_nigroviridis
ENSCAFG00000000636	VARS	54	95.506	ENSTBEG00000004728	-	60	95.506	Tupaia_belangeri
ENSCAFG00000000636	VARS	100	86.472	ENSTTRG00000014128	VARS	100	86.472	Tursiops_truncatus
ENSCAFG00000000636	VARS	100	92.217	ENSUAMG00000010424	VARS	100	92.217	Ursus_americanus
ENSCAFG00000000636	VARS	93	96.032	ENSUMAG00000013486	VARS	98	96.032	Ursus_maritimus
ENSCAFG00000000636	VARS	100	99.209	ENSVVUG00000021323	VARS	100	99.209	Vulpes_vulpes
ENSCAFG00000000636	VARS	96	62.975	ENSXETG00000024076	vars	98	62.379	Xenopus_tropicalis
ENSCAFG00000000636	VARS	100	65.039	ENSXCOG00000019172	vars	100	65.039	Xiphophorus_couchianus
ENSCAFG00000000636	VARS	100	65.214	ENSXMAG00000010927	vars	100	65.214	Xiphophorus_maculatus