EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000000679 (Gene tree)
Gene ID: 481720
Gene Symbol: SKIV2L
Alias: -
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 12161 bases
Position: chr12:1412306-1424466
Accession: 46200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000000965	rRNA_proc-arch	PF13234.6	7.3e-40	1	1
ENSCAFP00000000965	DEAD	PF00270.29	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000001053	-	3975	XM_538841	ENSCAFP00000000965	1246 (aa)	XP_538841	E2RSD6

Gene Model

Click here to download ENSCAFG00000000679's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000000679	SKIV2L	76	36.891	ENSCAFG00000006818	MTREX	89	36.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000679	SKIV2L	100	94.623	ENSG00000204351	SKIV2L	100	94.623	Homo_sapiens
ENSCAFG00000000679	SKIV2L	99	61.349	ENSAPOG00000008257	skiv2l	99	61.687	Acanthochromis_polyacanthus
ENSCAFG00000000679	SKIV2L	100	97.271	ENSAMEG00000002078	SKIV2L	100	97.271	Ailuropoda_melanoleuca
ENSCAFG00000000679	SKIV2L	99	59.856	ENSACIG00000016719	skiv2l	99	59.790	Amphilophus_citrinellus
ENSCAFG00000000679	SKIV2L	99	61.032	ENSAOCG00000017352	skiv2l	99	60.978	Amphiprion_ocellaris
ENSCAFG00000000679	SKIV2L	99	60.873	ENSAPEG00000001055	skiv2l	99	60.817	Amphiprion_percula
ENSCAFG00000000679	SKIV2L	99	61.005	ENSATEG00000007601	skiv2l	99	60.978	Anabas_testudineus
ENSCAFG00000000679	SKIV2L	99	65.672	ENSACAG00000011746	SKIV2L	98	66.269	Anolis_carolinensis
ENSCAFG00000000679	SKIV2L	100	95.185	ENSANAG00000037992	SKIV2L	100	95.185	Aotus_nancymaae
ENSCAFG00000000679	SKIV2L	99	61.349	ENSACLG00000006886	skiv2l	99	61.298	Astatotilapia_calliptera
ENSCAFG00000000679	SKIV2L	98	59.552	ENSAMXG00000011517	skiv2l	99	59.392	Astyanax_mexicanus
ENSCAFG00000000679	SKIV2L	100	95.185	ENSBTAG00000005587	SKIV2L	100	95.185	Bos_taurus
ENSCAFG00000000679	SKIV2L	96	39.266	WBGene00008502	skih-2	99	39.420	Caenorhabditis_elegans
ENSCAFG00000000679	SKIV2L	100	94.783	ENSCJAG00000002263	SKIV2L	100	94.783	Callithrix_jacchus
ENSCAFG00000000679	SKIV2L	100	99.920	ENSCAFG00020000948	SKIV2L	100	99.920	Canis_lupus_dingo
ENSCAFG00000000679	SKIV2L	100	95.024	ENSCHIG00000012897	SKIV2L	100	95.024	Capra_hircus
ENSCAFG00000000679	SKIV2L	100	94.623	ENSTSYG00000012133	SKIV2L	100	94.623	Carlito_syrichta
ENSCAFG00000000679	SKIV2L	100	92.135	ENSCPOG00000001307	SKIV2L	98	92.408	Cavia_porcellus
ENSCAFG00000000679	SKIV2L	100	95.024	ENSCCAG00000026206	SKIV2L	100	95.024	Cebus_capucinus
ENSCAFG00000000679	SKIV2L	100	94.543	ENSCATG00000036901	SKIV2L	100	94.543	Cercocebus_atys
ENSCAFG00000000679	SKIV2L	100	92.857	ENSCLAG00000007678	SKIV2L	100	92.857	Chinchilla_lanigera
ENSCAFG00000000679	SKIV2L	100	94.543	ENSCSAG00000008988	SKIV2L	100	94.543	Chlorocebus_sabaeus
ENSCAFG00000000679	SKIV2L	87	64.912	ENSCPBG00000000343	SKIV2L	96	65.017	Chrysemys_picta_bellii
ENSCAFG00000000679	SKIV2L	94	51.100	ENSCING00000005576	-	99	50.889	Ciona_intestinalis
ENSCAFG00000000679	SKIV2L	99	94.940	ENSCANG00000039709	SKIV2L	98	95.102	Colobus_angolensis_palliatus
ENSCAFG00000000679	SKIV2L	100	93.424	ENSCGRG00001008385	Skiv2l	100	93.424	Cricetulus_griseus_chok1gshd
ENSCAFG00000000679	SKIV2L	99	61.182	ENSCSEG00000011326	skiv2l	98	60.950	Cynoglossus_semilaevis
ENSCAFG00000000679	SKIV2L	99	61.244	ENSCVAG00000003072	skiv2l	99	61.026	Cyprinodon_variegatus
ENSCAFG00000000679	SKIV2L	99	60.315	ENSDARG00000062206	skiv2l	99	60.335	Danio_rerio
ENSCAFG00000000679	SKIV2L	100	88.489	ENSDNOG00000037590	SKIV2L	100	88.649	Dasypus_novemcinctus
ENSCAFG00000000679	SKIV2L	93	43.839	FBgn0039117	tst	97	43.849	Drosophila_melanogaster
ENSCAFG00000000679	SKIV2L	72	93.445	ENSETEG00000009522	SKIV2L	68	93.445	Echinops_telfairi
ENSCAFG00000000679	SKIV2L	89	56.868	ENSEBUG00000013680	-	95	57.238	Eptatretus_burgeri
ENSCAFG00000000679	SKIV2L	93	96.213	ENSEASG00005015534	SKIV2L	100	96.213	Equus_asinus_asinus
ENSCAFG00000000679	SKIV2L	96	95.210	ENSECAG00000021823	SKIV2L	96	95.847	Equus_caballus
ENSCAFG00000000679	SKIV2L	54	99.209	ENSEEUG00000005049	SKIV2L	57	99.209	Erinaceus_europaeus
ENSCAFG00000000679	SKIV2L	99	60.206	ENSELUG00000000181	skiv2l	94	66.287	Esox_lucius
ENSCAFG00000000679	SKIV2L	100	97.512	ENSFCAG00000004519	SKIV2L	100	97.512	Felis_catus
ENSCAFG00000000679	SKIV2L	100	89.495	ENSFDAG00000009438	SKIV2L	98	89.967	Fukomys_damarensis
ENSCAFG00000000679	SKIV2L	99	61.155	ENSFHEG00000008853	skiv2l	99	61.267	Fundulus_heteroclitus
ENSCAFG00000000679	SKIV2L	99	59.105	ENSGMOG00000005926	skiv2l	98	59.286	Gadus_morhua
ENSCAFG00000000679	SKIV2L	77	60.915	ENSGALG00000035499	SKIV2L	98	61.134	Gallus_gallus
ENSCAFG00000000679	SKIV2L	99	61.155	ENSGAFG00000002382	skiv2l	99	61.107	Gambusia_affinis
ENSCAFG00000000679	SKIV2L	99	60.223	ENSGACG00000002927	skiv2l	98	60.258	Gasterosteus_aculeatus
ENSCAFG00000000679	SKIV2L	100	94.382	ENSGGOG00000002270	SKIV2L	100	94.382	Gorilla_gorilla
ENSCAFG00000000679	SKIV2L	99	61.190	ENSHBUG00000000726	skiv2l	99	61.138	Haplochromis_burtoni
ENSCAFG00000000679	SKIV2L	100	91.106	ENSHGLG00000016596	SKIV2L	98	91.687	Heterocephalus_glaber_female
ENSCAFG00000000679	SKIV2L	100	88.462	ENSHGLG00100014161	SKIV2L	98	88.998	Heterocephalus_glaber_male
ENSCAFG00000000679	SKIV2L	98	59.561	ENSHCOG00000007191	skiv2l	100	59.561	Hippocampus_comes
ENSCAFG00000000679	SKIV2L	99	59.953	ENSIPUG00000016263	skiv2l	100	60.064	Ictalurus_punctatus
ENSCAFG00000000679	SKIV2L	100	94.703	ENSSTOG00000014596	SKIV2L	98	95.102	Ictidomys_tridecemlineatus
ENSCAFG00000000679	SKIV2L	71	60.432	ENSLACG00000002986	-	61	59.446	Latimeria_chalumnae
ENSCAFG00000000679	SKIV2L	100	93.740	ENSLAFG00000014231	SKIV2L	98	94.122	Loxodonta_africana
ENSCAFG00000000679	SKIV2L	100	94.783	ENSMFAG00000034235	SKIV2L	100	94.783	Macaca_fascicularis
ENSCAFG00000000679	SKIV2L	100	94.703	ENSMMUG00000000736	SKIV2L	100	94.703	Macaca_mulatta
ENSCAFG00000000679	SKIV2L	100	94.703	ENSMNEG00000044474	SKIV2L	100	94.703	Macaca_nemestrina
ENSCAFG00000000679	SKIV2L	100	94.543	ENSMLEG00000030512	SKIV2L	100	94.543	Mandrillus_leucophaeus
ENSCAFG00000000679	SKIV2L	99	61.032	ENSMAMG00000002927	skiv2l	99	60.740	Mastacembelus_armatus
ENSCAFG00000000679	SKIV2L	99	61.190	ENSMZEG00005026415	skiv2l	99	61.138	Maylandia_zebra
ENSCAFG00000000679	SKIV2L	70	50.943	ENSMGAG00000001320	SKIV2L	97	50.943	Meleagris_gallopavo
ENSCAFG00000000679	SKIV2L	100	92.462	ENSMAUG00000018613	Skiv2l	100	92.628	Mesocricetus_auratus
ENSCAFG00000000679	SKIV2L	100	94.703	ENSMICG00000046331	SKIV2L	98	95.020	Microcebus_murinus
ENSCAFG00000000679	SKIV2L	100	91.740	ENSMOCG00000014240	Skiv2l	100	91.820	Microtus_ochrogaster
ENSCAFG00000000679	SKIV2L	99	60.096	ENSMMOG00000014547	skiv2l	98	59.708	Mola_mola
ENSCAFG00000000679	SKIV2L	100	87.830	ENSMODG00000015052	SKIV2L	98	88.192	Monodelphis_domestica
ENSCAFG00000000679	SKIV2L	99	59.581	ENSMALG00000010535	skiv2l	98	59.561	Monopterus_albus
ENSCAFG00000000679	SKIV2L	100	92.702	MGP_CAROLIEiJ_G0021477	Skiv2l	100	92.702	Mus_caroli
ENSCAFG00000000679	SKIV2L	100	92.702	ENSMUSG00000040356	Skiv2l	100	92.702	Mus_musculus
ENSCAFG00000000679	SKIV2L	100	92.382	MGP_PahariEiJ_G0020472	Skiv2l	100	92.382	Mus_pahari
ENSCAFG00000000679	SKIV2L	100	92.302	MGP_SPRETEiJ_G0022382	Skiv2l	100	92.302	Mus_spretus
ENSCAFG00000000679	SKIV2L	100	97.352	ENSMPUG00000010567	SKIV2L	100	97.352	Mustela_putorius_furo
ENSCAFG00000000679	SKIV2L	100	94.141	ENSMLUG00000000628	SKIV2L	100	94.141	Myotis_lucifugus
ENSCAFG00000000679	SKIV2L	99	60.654	ENSNBRG00000018650	skiv2l	98	60.645	Neolamprologus_brichardi
ENSCAFG00000000679	SKIV2L	98	91.361	ENSNLEG00000006451	SKIV2L	99	91.510	Nomascus_leucogenys
ENSCAFG00000000679	SKIV2L	78	92.920	ENSMEUG00000006072	SKIV2L	77	92.920	Notamacropus_eugenii
ENSCAFG00000000679	SKIV2L	100	93.339	ENSOPRG00000003972	SKIV2L	100	93.339	Ochotona_princeps
ENSCAFG00000000679	SKIV2L	100	91.653	ENSODEG00000017516	SKIV2L	100	91.653	Octodon_degus
ENSCAFG00000000679	SKIV2L	99	61.981	ENSONIG00000013500	skiv2l	99	62.047	Oreochromis_niloticus
ENSCAFG00000000679	SKIV2L	100	94.382	ENSOCUG00000007019	SKIV2L	100	94.382	Oryctolagus_cuniculus
ENSCAFG00000000679	SKIV2L	99	61.392	ENSORLG00000002021	skiv2l	99	61.365	Oryzias_latipes
ENSCAFG00000000679	SKIV2L	99	61.392	ENSORLG00020009462	skiv2l	99	61.285	Oryzias_latipes_hni
ENSCAFG00000000679	SKIV2L	99	61.203	ENSORLG00015016750	skiv2l	99	61.124	Oryzias_latipes_hsok
ENSCAFG00000000679	SKIV2L	99	62.113	ENSOMEG00000008531	skiv2l	99	61.767	Oryzias_melastigma
ENSCAFG00000000679	SKIV2L	100	94.623	ENSOGAG00000009578	SKIV2L	100	94.623	Otolemur_garnettii
ENSCAFG00000000679	SKIV2L	100	89.507	ENSOARG00000002411	-	100	89.507	Ovis_aries
ENSCAFG00000000679	SKIV2L	98	93.760	ENSPPAG00000040211	SKIV2L	99	93.831	Pan_paniscus
ENSCAFG00000000679	SKIV2L	100	97.592	ENSPPRG00000005017	SKIV2L	100	97.592	Panthera_pardus
ENSCAFG00000000679	SKIV2L	100	97.111	ENSPTIG00000021656	SKIV2L	100	97.111	Panthera_tigris_altaica
ENSCAFG00000000679	SKIV2L	100	94.543	ENSPTRG00000017997	SKIV2L	100	94.543	Pan_troglodytes
ENSCAFG00000000679	SKIV2L	98	93.512	ENSPANG00000011501	SKIV2L	99	93.582	Papio_anubis
ENSCAFG00000000679	SKIV2L	99	60.362	ENSPKIG00000011876	skiv2l	99	60.526	Paramormyrops_kingsleyae
ENSCAFG00000000679	SKIV2L	99	60.450	ENSPMGG00000019707	skiv2l	98	60.439	Periophthalmus_magnuspinnatus
ENSCAFG00000000679	SKIV2L	100	93.424	ENSPEMG00000019001	Skiv2l	100	93.424	Peromyscus_maniculatus_bairdii
ENSCAFG00000000679	SKIV2L	100	87.600	ENSPCIG00000018792	SKIV2L	98	87.958	Phascolarctos_cinereus
ENSCAFG00000000679	SKIV2L	99	61.155	ENSPFOG00000002424	skiv2l	99	61.107	Poecilia_formosa
ENSCAFG00000000679	SKIV2L	99	61.283	ENSPLAG00000018304	skiv2l	99	61.236	Poecilia_latipinna
ENSCAFG00000000679	SKIV2L	99	61.234	ENSPMEG00000006997	skiv2l	99	61.187	Poecilia_mexicana
ENSCAFG00000000679	SKIV2L	99	59.566	ENSPREG00000002277	skiv2l	96	66.287	Poecilia_reticulata
ENSCAFG00000000679	SKIV2L	100	94.222	ENSPPYG00000016472	SKIV2L	100	94.222	Pongo_abelii
ENSCAFG00000000679	SKIV2L	77	94.216	ENSPCAG00000004178	SKIV2L	77	94.216	Procavia_capensis
ENSCAFG00000000679	SKIV2L	100	95.907	ENSPCOG00000010308	SKIV2L	100	95.907	Propithecus_coquereli
ENSCAFG00000000679	SKIV2L	100	94.141	ENSPVAG00000005136	SKIV2L	98	94.286	Pteropus_vampyrus
ENSCAFG00000000679	SKIV2L	99	59.920	ENSPNYG00000017853	skiv2l	98	59.578	Pundamilia_nyererei
ENSCAFG00000000679	SKIV2L	98	60.786	ENSPNAG00000011823	skiv2l	99	60.946	Pygocentrus_nattereri
ENSCAFG00000000679	SKIV2L	100	93.264	ENSRNOG00000000421	Skiv2l	100	93.264	Rattus_norvegicus
ENSCAFG00000000679	SKIV2L	98	92.227	ENSRBIG00000035485	SKIV2L	99	92.295	Rhinopithecus_bieti
ENSCAFG00000000679	SKIV2L	100	94.543	ENSRROG00000036429	SKIV2L	100	94.543	Rhinopithecus_roxellana
ENSCAFG00000000679	SKIV2L	93	37.887	YLR398C	-	93	37.520	Saccharomyces_cerevisiae
ENSCAFG00000000679	SKIV2L	100	94.864	ENSSBOG00000027920	SKIV2L	100	94.864	Saimiri_boliviensis_boliviensis
ENSCAFG00000000679	SKIV2L	100	87.270	ENSSHAG00000008963	SKIV2L	98	86.564	Sarcophilus_harrisii
ENSCAFG00000000679	SKIV2L	99	60.993	ENSSFOG00015016930	skiv2l	99	61.182	Scleropages_formosus
ENSCAFG00000000679	SKIV2L	99	60.734	ENSSMAG00000020185	skiv2l	99	60.514	Scophthalmus_maximus
ENSCAFG00000000679	SKIV2L	99	61.283	ENSSDUG00000019977	skiv2l	99	61.316	Seriola_dumerili
ENSCAFG00000000679	SKIV2L	99	60.177	ENSSLDG00000024382	skiv2l	98	59.870	Seriola_lalandi_dorsalis
ENSCAFG00000000679	SKIV2L	99	62.296	ENSSPUG00000012945	SKIV2L	98	62.283	Sphenodon_punctatus
ENSCAFG00000000679	SKIV2L	94	61.139	ENSSPAG00000012904	skiv2l	98	60.729	Stegastes_partitus
ENSCAFG00000000679	SKIV2L	100	95.425	ENSSSCG00000001424	SKIV2L	100	95.425	Sus_scrofa
ENSCAFG00000000679	SKIV2L	74	61.651	ENSTRUG00000000966	skiv2l	100	55.504	Takifugu_rubripes
ENSCAFG00000000679	SKIV2L	99	59.507	ENSTNIG00000004382	skiv2l	98	59.516	Tetraodon_nigroviridis
ENSCAFG00000000679	SKIV2L	94	93.497	ENSTBEG00000003462	SKIV2L	93	93.497	Tupaia_belangeri
ENSCAFG00000000679	SKIV2L	100	89.968	ENSTTRG00000005931	SKIV2L	100	89.968	Tursiops_truncatus
ENSCAFG00000000679	SKIV2L	100	97.592	ENSUAMG00000024336	SKIV2L	100	97.592	Ursus_americanus
ENSCAFG00000000679	SKIV2L	93	97.762	ENSUMAG00000012666	SKIV2L	100	97.762	Ursus_maritimus
ENSCAFG00000000679	SKIV2L	99	99.355	ENSVVUG00000022807	SKIV2L	99	99.355	Vulpes_vulpes
ENSCAFG00000000679	SKIV2L	100	58.856	ENSXETG00000010932	skiv2l	98	59.080	Xenopus_tropicalis
ENSCAFG00000000679	SKIV2L	99	61.298	ENSXCOG00000019517	skiv2l	96	61.296	Xiphophorus_couchianus
ENSCAFG00000000679	SKIV2L	99	60.887	ENSXMAG00000014079	skiv2l	99	60.835	Xiphophorus_maculatus