EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000000740 (Gene tree)
Gene ID: 484065
Gene Symbol: PNLDC1
Alias: -
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 18516 bases
Position: chr1:49044978-49063493
Accession: 44744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000001049	CAF1	PF04857.20	1.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000001145	-	2521	XM_541182	ENSCAFP00000001049	531 (aa)	XP_541182	E2R0L8

Gene Model

Click here to download ENSCAFG00000000740's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000000740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000000740	PNLDC1	99	87.925	ENSG00000146453	PNLDC1	99	87.925	Homo_sapiens
ENSCAFG00000000740	PNLDC1	99	95.463	ENSAMEG00000015371	PNLDC1	99	95.463	Ailuropoda_melanoleuca
ENSCAFG00000000740	PNLDC1	95	59.649	ENSAPLG00000007014	PNLDC1	98	59.649	Anas_platyrhynchos
ENSCAFG00000000740	PNLDC1	99	60.227	ENSACAG00000013667	PNLDC1	98	60.192	Anolis_carolinensis
ENSCAFG00000000740	PNLDC1	100	87.006	ENSANAG00000034713	PNLDC1	100	87.867	Aotus_nancymaae
ENSCAFG00000000740	PNLDC1	95	92.292	ENSBTAG00000015166	PNLDC1	96	92.292	Bos_taurus
ENSCAFG00000000740	PNLDC1	100	85.687	ENSCJAG00000011865	PNLDC1	100	85.687	Callithrix_jacchus
ENSCAFG00000000740	PNLDC1	100	97.175	ENSCAFG00020017742	PNLDC1	100	97.175	Canis_lupus_dingo
ENSCAFG00000000740	PNLDC1	100	90.019	ENSCHIG00000003141	PNLDC1	100	90.019	Capra_hircus
ENSCAFG00000000740	PNLDC1	100	86.441	ENSTSYG00000005606	PNLDC1	100	86.441	Carlito_syrichta
ENSCAFG00000000740	PNLDC1	100	63.534	ENSCAPG00000011893	PNLDC1	100	63.534	Cavia_aperea
ENSCAFG00000000740	PNLDC1	100	79.887	ENSCPOG00000019565	PNLDC1	100	79.887	Cavia_porcellus
ENSCAFG00000000740	PNLDC1	100	87.006	ENSCCAG00000026232	PNLDC1	100	87.006	Cebus_capucinus
ENSCAFG00000000740	PNLDC1	100	87.194	ENSCATG00000033196	PNLDC1	100	87.194	Cercocebus_atys
ENSCAFG00000000740	PNLDC1	99	84.848	ENSCLAG00000003228	PNLDC1	99	84.848	Chinchilla_lanigera
ENSCAFG00000000740	PNLDC1	97	86.628	ENSCSAG00000012478	PNLDC1	99	86.628	Chlorocebus_sabaeus
ENSCAFG00000000740	PNLDC1	96	66.211	ENSCPBG00000004050	PNLDC1	100	66.211	Chrysemys_picta_bellii
ENSCAFG00000000740	PNLDC1	95	87.352	ENSCANG00000043076	PNLDC1	97	87.352	Colobus_angolensis_palliatus
ENSCAFG00000000740	PNLDC1	100	65.348	ENSCGRG00001011981	-	99	65.348	Cricetulus_griseus_chok1gshd
ENSCAFG00000000740	PNLDC1	100	82.109	ENSCGRG00001007470	-	99	82.109	Cricetulus_griseus_chok1gshd
ENSCAFG00000000740	PNLDC1	100	68.173	ENSCGRG00000003103	-	99	68.173	Cricetulus_griseus_crigri
ENSCAFG00000000740	PNLDC1	100	82.109	ENSCGRG00000010221	-	99	82.109	Cricetulus_griseus_crigri
ENSCAFG00000000740	PNLDC1	100	88.534	ENSDNOG00000013709	PNLDC1	100	88.534	Dasypus_novemcinctus
ENSCAFG00000000740	PNLDC1	100	81.086	ENSDORG00000011517	Pnldc1	99	88.179	Dipodomys_ordii
ENSCAFG00000000740	PNLDC1	93	77.530	ENSETEG00000007587	PNLDC1	99	77.530	Echinops_telfairi
ENSCAFG00000000740	PNLDC1	100	85.047	ENSEASG00005019029	PNLDC1	100	85.047	Equus_asinus_asinus
ENSCAFG00000000740	PNLDC1	100	93.974	ENSECAG00000012898	PNLDC1	100	93.974	Equus_caballus
ENSCAFG00000000740	PNLDC1	67	87.500	ENSEEUG00000005717	-	86	87.500	Erinaceus_europaeus
ENSCAFG00000000740	PNLDC1	100	95.669	ENSFCAG00000002848	PNLDC1	100	95.669	Felis_catus
ENSCAFG00000000740	PNLDC1	94	58.449	ENSFALG00000012081	PNLDC1	99	58.449	Ficedula_albicollis
ENSCAFG00000000740	PNLDC1	100	84.746	ENSFDAG00000021334	PNLDC1	100	84.746	Fukomys_damarensis
ENSCAFG00000000740	PNLDC1	79	59.382	ENSGALG00000011624	PNLDC1	82	59.382	Gallus_gallus
ENSCAFG00000000740	PNLDC1	99	67.045	ENSGAGG00000015276	PNLDC1	100	67.975	Gopherus_agassizii
ENSCAFG00000000740	PNLDC1	100	87.759	ENSGGOG00000014077	PNLDC1	100	87.759	Gorilla_gorilla
ENSCAFG00000000740	PNLDC1	100	86.441	ENSHGLG00000006889	PNLDC1	100	86.441	Heterocephalus_glaber_female
ENSCAFG00000000740	PNLDC1	100	86.441	ENSHGLG00100018275	PNLDC1	100	86.441	Heterocephalus_glaber_male
ENSCAFG00000000740	PNLDC1	99	90.720	ENSSTOG00000005595	PNLDC1	99	90.720	Ictidomys_tridecemlineatus
ENSCAFG00000000740	PNLDC1	99	79.962	ENSJJAG00000009937	Pnldc1	99	79.962	Jaculus_jaculus
ENSCAFG00000000740	PNLDC1	59	89.524	ENSLAFG00000030189	PNLDC1	92	89.524	Loxodonta_africana
ENSCAFG00000000740	PNLDC1	100	87.947	ENSMFAG00000041296	PNLDC1	100	87.947	Macaca_fascicularis
ENSCAFG00000000740	PNLDC1	100	87.947	ENSMMUG00000004181	PNLDC1	100	87.947	Macaca_mulatta
ENSCAFG00000000740	PNLDC1	100	87.759	ENSMNEG00000034271	PNLDC1	100	87.759	Macaca_nemestrina
ENSCAFG00000000740	PNLDC1	100	84.181	ENSMLEG00000044059	PNLDC1	100	84.181	Mandrillus_leucophaeus
ENSCAFG00000000740	PNLDC1	95	59.289	ENSMGAG00000012470	PNLDC1	97	59.289	Meleagris_gallopavo
ENSCAFG00000000740	PNLDC1	99	65.913	ENSMAUG00000012298	Pnldc1	100	65.913	Mesocricetus_auratus
ENSCAFG00000000740	PNLDC1	100	88.701	ENSMICG00000008021	PNLDC1	100	88.701	Microcebus_murinus
ENSCAFG00000000740	PNLDC1	100	87.242	ENSMOCG00000014287	Pnldc1	100	87.242	Microtus_ochrogaster
ENSCAFG00000000740	PNLDC1	99	77.040	ENSMODG00000007420	PNLDC1	97	77.264	Monodelphis_domestica
ENSCAFG00000000740	PNLDC1	100	87.382	MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.382	Mus_caroli
ENSCAFG00000000740	PNLDC1	100	87.947	ENSMUSG00000073460	Pnldc1	100	91.571	Mus_musculus
ENSCAFG00000000740	PNLDC1	100	87.782	MGP_PahariEiJ_G0023361	Pnldc1	100	87.782	Mus_pahari
ENSCAFG00000000740	PNLDC1	100	87.571	MGP_SPRETEiJ_G0021975	Pnldc1	100	87.571	Mus_spretus
ENSCAFG00000000740	PNLDC1	99	96.604	ENSMPUG00000004920	PNLDC1	99	96.604	Mustela_putorius_furo
ENSCAFG00000000740	PNLDC1	100	90.207	ENSMLUG00000000747	PNLDC1	100	90.207	Myotis_lucifugus
ENSCAFG00000000740	PNLDC1	100	88.136	ENSNGAG00000017714	Pnldc1	99	88.136	Nannospalax_galili
ENSCAFG00000000740	PNLDC1	97	86.047	ENSNLEG00000011282	PNLDC1	99	86.047	Nomascus_leucogenys
ENSCAFG00000000740	PNLDC1	54	68.403	ENSMEUG00000014042	-	100	68.403	Notamacropus_eugenii
ENSCAFG00000000740	PNLDC1	60	64.375	ENSMEUG00000011926	-	64	64.375	Notamacropus_eugenii
ENSCAFG00000000740	PNLDC1	79	88.636	ENSOPRG00000003813	PNLDC1	79	88.636	Ochotona_princeps
ENSCAFG00000000740	PNLDC1	100	85.122	ENSODEG00000008047	PNLDC1	100	85.122	Octodon_degus
ENSCAFG00000000740	PNLDC1	99	58.223	ENSOANG00000012199	PNLDC1	99	60.113	Ornithorhynchus_anatinus
ENSCAFG00000000740	PNLDC1	100	88.136	ENSOCUG00000013867	PNLDC1	100	88.136	Oryctolagus_cuniculus
ENSCAFG00000000740	PNLDC1	99	89.205	ENSOGAG00000007331	PNLDC1	99	89.205	Otolemur_garnettii
ENSCAFG00000000740	PNLDC1	100	90.207	ENSOARG00000004585	PNLDC1	100	90.207	Ovis_aries
ENSCAFG00000000740	PNLDC1	100	87.382	ENSPPAG00000026651	PNLDC1	100	87.382	Pan_paniscus
ENSCAFG00000000740	PNLDC1	100	95.292	ENSPPRG00000012854	PNLDC1	100	95.292	Panthera_pardus
ENSCAFG00000000740	PNLDC1	99	89.773	ENSPTIG00000011501	PNLDC1	99	89.773	Panthera_tigris_altaica
ENSCAFG00000000740	PNLDC1	100	87.382	ENSPTRG00000018762	PNLDC1	100	87.382	Pan_troglodytes
ENSCAFG00000000740	PNLDC1	100	88.136	ENSPANG00000022009	PNLDC1	100	88.136	Papio_anubis
ENSCAFG00000000740	PNLDC1	100	88.136	ENSPEMG00000016301	Pnldc1	99	88.136	Peromyscus_maniculatus_bairdii
ENSCAFG00000000740	PNLDC1	83	79.043	ENSPCIG00000023412	PNLDC1	100	79.043	Phascolarctos_cinereus
ENSCAFG00000000740	PNLDC1	100	82.331	ENSPPYG00000017148	PNLDC1	100	82.331	Pongo_abelii
ENSCAFG00000000740	PNLDC1	99	78.113	ENSPCAG00000014169	PNLDC1	99	78.113	Procavia_capensis
ENSCAFG00000000740	PNLDC1	100	88.512	ENSPCOG00000025722	PNLDC1	100	88.512	Propithecus_coquereli
ENSCAFG00000000740	PNLDC1	73	97.403	ENSPVAG00000005325	PNLDC1	73	97.403	Pteropus_vampyrus
ENSCAFG00000000740	PNLDC1	100	87.571	ENSRNOG00000023140	Pnldc1	100	87.571	Rattus_norvegicus
ENSCAFG00000000740	PNLDC1	100	87.947	ENSRBIG00000033806	PNLDC1	100	87.947	Rhinopithecus_bieti
ENSCAFG00000000740	PNLDC1	95	87.945	ENSRROG00000043919	PNLDC1	97	87.945	Rhinopithecus_roxellana
ENSCAFG00000000740	PNLDC1	100	87.382	ENSSBOG00000019135	PNLDC1	100	87.382	Saimiri_boliviensis_boliviensis
ENSCAFG00000000740	PNLDC1	96	76.772	ENSSHAG00000015192	PNLDC1	96	77.000	Sarcophilus_harrisii
ENSCAFG00000000740	PNLDC1	54	68.182	ENSSPUG00000004627	PNLDC1	99	68.304	Sphenodon_punctatus
ENSCAFG00000000740	PNLDC1	96	90.588	ENSSSCG00000004046	PNLDC1	99	90.588	Sus_scrofa
ENSCAFG00000000740	PNLDC1	91	59.794	ENSTGUG00000011418	PNLDC1	99	59.794	Taeniopygia_guttata
ENSCAFG00000000740	PNLDC1	96	78.039	ENSTBEG00000009131	PNLDC1	98	78.039	Tupaia_belangeri
ENSCAFG00000000740	PNLDC1	73	86.788	ENSTTRG00000010409	PNLDC1	73	86.788	Tursiops_truncatus
ENSCAFG00000000740	PNLDC1	99	82.407	ENSUAMG00000015783	PNLDC1	99	82.407	Ursus_americanus
ENSCAFG00000000740	PNLDC1	95	87.843	ENSUMAG00000011903	PNLDC1	99	87.843	Ursus_maritimus
ENSCAFG00000000740	PNLDC1	99	96.283	ENSVVUG00000006586	PNLDC1	99	99.795	Vulpes_vulpes