EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000001231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 11121 bases
Position: chr12:3996586-4007706
Accession: 608109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000001764	zf-U1	PF06220.12	6.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000001913	-	381	XM_532115	ENSCAFP00000001764	127 (aa)	-	K9J6N9

Gene Model

Click here to download ENSCAFG00000001231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000001231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000001231	-	93	97.458	ENSCAFG00000031775	-	74	97.458
ENSCAFG00000001231	-	93	98.305	ENSCAFG00000028988	-	74	98.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000001231	-	93	100.000	ENSG00000124562	SNRPC	74	100.000	Homo_sapiens
ENSCAFG00000001231	-	91	99.138	ENSAMEG00000000963	SNRPC	64	99.138	Ailuropoda_melanoleuca
ENSCAFG00000001231	-	91	96.552	ENSACAG00000015721	SNRPC	64	96.552	Anolis_carolinensis
ENSCAFG00000001231	-	83	90.566	ENSANAG00000020588	-	61	91.429	Aotus_nancymaae
ENSCAFG00000001231	-	93	100.000	ENSANAG00000019696	-	74	100.000	Aotus_nancymaae
ENSCAFG00000001231	-	76	93.750	ENSANAG00000019157	-	60	93.750	Aotus_nancymaae
ENSCAFG00000001231	-	97	95.935	ENSANAG00000019726	-	75	95.935	Aotus_nancymaae
ENSCAFG00000001231	-	92	77.966	ENSANAG00000021444	-	61	83.333	Aotus_nancymaae
ENSCAFG00000001231	-	93	100.000	ENSANAG00000007843	-	74	100.000	Aotus_nancymaae
ENSCAFG00000001231	-	90	84.211	ENSANAG00000021026	-	64	85.088	Aotus_nancymaae
ENSCAFG00000001231	-	93	100.000	ENSBTAG00000024549	SNRPC	74	100.000	Bos_taurus
ENSCAFG00000001231	-	56	64.000	WBGene00017238	F08B4.7	90	45.312	Caenorhabditis_elegans
ENSCAFG00000001231	-	93	100.000	ENSCJAG00000043055	-	74	100.000	Callithrix_jacchus
ENSCAFG00000001231	-	93	100.000	ENSCJAG00000015321	-	74	100.000	Callithrix_jacchus
ENSCAFG00000001231	-	93	97.458	ENSCJAG00000041822	-	74	97.458	Callithrix_jacchus
ENSCAFG00000001231	-	76	95.833	ENSCAFG00020005758	-	59	96.809	Canis_lupus_dingo
ENSCAFG00000001231	-	93	100.000	ENSCAFG00020005945	-	74	100.000	Canis_lupus_dingo
ENSCAFG00000001231	-	93	97.458	ENSCAFG00020017383	-	74	97.458	Canis_lupus_dingo
ENSCAFG00000001231	-	93	99.153	ENSCAFG00020026577	-	66	99.153	Canis_lupus_dingo
ENSCAFG00000001231	-	93	99.153	ENSCHIG00000012087	-	74	99.153	Capra_hircus
ENSCAFG00000001231	-	76	81.250	ENSTSYG00000025721	-	60	75.000	Carlito_syrichta
ENSCAFG00000001231	-	93	100.000	ENSTSYG00000011216	-	74	100.000	Carlito_syrichta
ENSCAFG00000001231	-	86	93.578	ENSTSYG00000029745	-	55	93.578	Carlito_syrichta
ENSCAFG00000001231	-	80	100.000	ENSCAPG00000005161	SNRPC	71	100.000	Cavia_aperea
ENSCAFG00000001231	-	93	100.000	ENSCPOG00000008563	SNRPC	74	100.000	Cavia_porcellus
ENSCAFG00000001231	-	90	69.841	ENSCCAG00000028293	-	59	89.610	Cebus_capucinus
ENSCAFG00000001231	-	73	66.667	ENSCCAG00000022209	-	53	66.667	Cebus_capucinus
ENSCAFG00000001231	-	81	90.291	ENSCCAG00000036059	-	55	94.949	Cebus_capucinus
ENSCAFG00000001231	-	76	92.784	ENSCCAG00000022751	-	59	92.784	Cebus_capucinus
ENSCAFG00000001231	-	93	100.000	ENSCATG00000035787	SNRPC	74	100.000	Cercocebus_atys
ENSCAFG00000001231	-	94	82.353	ENSCLAG00000010242	-	61	82.178	Chinchilla_lanigera
ENSCAFG00000001231	-	93	100.000	ENSCLAG00000016920	SNRPC	74	100.000	Chinchilla_lanigera
ENSCAFG00000001231	-	93	100.000	ENSCSAG00000009821	SNRPC	66	100.000	Chlorocebus_sabaeus
ENSCAFG00000001231	-	93	98.305	ENSCPBG00000027142	SNRPC	74	98.305	Chrysemys_picta_bellii
ENSCAFG00000001231	-	93	100.000	ENSCANG00000028035	SNRPC	74	100.000	Colobus_angolensis_palliatus
ENSCAFG00000001231	-	93	99.153	ENSCGRG00001009011	-	74	99.153	Cricetulus_griseus_chok1gshd
ENSCAFG00000001231	-	61	74.026	ENSCGRG00001021483	-	57	77.083	Cricetulus_griseus_chok1gshd
ENSCAFG00000001231	-	91	98.276	ENSCGRG00000005005	Snrpc	73	98.276	Cricetulus_griseus_crigri
ENSCAFG00000001231	-	93	100.000	ENSDNOG00000042403	-	94	100.000	Dasypus_novemcinctus
ENSCAFG00000001231	-	94	98.319	ENSDNOG00000034699	-	74	98.319	Dasypus_novemcinctus
ENSCAFG00000001231	-	61	96.104	ENSDORG00000029823	-	56	96.104	Dipodomys_ordii
ENSCAFG00000001231	-	61	92.208	ENSETEG00000011265	-	62	92.708	Echinops_telfairi
ENSCAFG00000001231	-	93	96.610	ENSETEG00000008268	-	76	96.610	Echinops_telfairi
ENSCAFG00000001231	-	66	94.048	ENSETEG00000008756	-	76	93.590	Echinops_telfairi
ENSCAFG00000001231	-	93	100.000	ENSEASG00005021007	SNRPC	74	100.000	Equus_asinus_asinus
ENSCAFG00000001231	-	93	100.000	ENSECAG00000026848	SNRPC	74	100.000	Equus_caballus
ENSCAFG00000001231	-	74	87.234	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSCAFG00000001231	-	100	98.425	ENSFCAG00000031775	-	75	98.425	Felis_catus
ENSCAFG00000001231	-	93	100.000	ENSFCAG00000044077	-	74	100.000	Felis_catus
ENSCAFG00000001231	-	93	99.153	ENSFALG00000003756	SNRPC	74	99.153	Ficedula_albicollis
ENSCAFG00000001231	-	93	100.000	ENSFDAG00000018111	SNRPC	74	100.000	Fukomys_damarensis
ENSCAFG00000001231	-	93	96.639	ENSGALG00000002773	SNRPC	74	96.639	Gallus_gallus
ENSCAFG00000001231	-	93	98.305	ENSGAGG00000003063	SNRPC	74	98.305	Gopherus_agassizii
ENSCAFG00000001231	-	93	100.000	ENSGGOG00000012499	SNRPC	74	100.000	Gorilla_gorilla
ENSCAFG00000001231	-	93	100.000	ENSHGLG00000013981	SNRPC	74	100.000	Heterocephalus_glaber_female
ENSCAFG00000001231	-	88	81.250	ENSHGLG00000005871	-	54	88.312	Heterocephalus_glaber_female
ENSCAFG00000001231	-	93	96.610	ENSHGLG00100017764	-	74	96.610	Heterocephalus_glaber_male
ENSCAFG00000001231	-	93	100.000	ENSHGLG00100009478	SNRPC	74	100.000	Heterocephalus_glaber_male
ENSCAFG00000001231	-	93	100.000	ENSSTOG00000013786	SNRPC	74	100.000	Ictidomys_tridecemlineatus
ENSCAFG00000001231	-	93	99.153	ENSJJAG00000021741	Snrpc	74	99.153	Jaculus_jaculus
ENSCAFG00000001231	-	93	100.000	ENSLAFG00000013534	SNRPC	74	100.000	Loxodonta_africana
ENSCAFG00000001231	-	93	99.153	ENSMFAG00000030525	-	74	99.153	Macaca_fascicularis
ENSCAFG00000001231	-	93	100.000	ENSMFAG00000031764	-	74	100.000	Macaca_fascicularis
ENSCAFG00000001231	-	83	100.000	ENSMMUG00000000869	-	69	100.000	Macaca_mulatta
ENSCAFG00000001231	-	93	99.153	ENSMMUG00000039415	-	74	99.153	Macaca_mulatta
ENSCAFG00000001231	-	74	89.362	ENSMMUG00000045425	-	60	89.583	Macaca_mulatta
ENSCAFG00000001231	-	93	100.000	ENSMNEG00000032731	SNRPC	74	100.000	Macaca_nemestrina
ENSCAFG00000001231	-	57	94.521	ENSMLEG00000040224	-	53	92.391	Mandrillus_leucophaeus
ENSCAFG00000001231	-	93	100.000	ENSMLEG00000033916	-	74	100.000	Mandrillus_leucophaeus
ENSCAFG00000001231	-	93	96.610	ENSMGAG00000006054	SNRPC	74	96.610	Meleagris_gallopavo
ENSCAFG00000001231	-	61	100.000	ENSMICG00000009130	-	53	100.000	Microcebus_murinus
ENSCAFG00000001231	-	93	100.000	ENSMICG00000032183	-	74	100.000	Microcebus_murinus
ENSCAFG00000001231	-	93	99.153	ENSMICG00000007339	-	74	99.153	Microcebus_murinus
ENSCAFG00000001231	-	93	99.153	ENSMOCG00000017609	Snrpc	74	99.153	Microtus_ochrogaster
ENSCAFG00000001231	-	61	89.610	ENSMODG00000025263	-	56	89.610	Monodelphis_domestica
ENSCAFG00000001231	-	93	98.305	ENSMODG00000013904	-	74	98.305	Monodelphis_domestica
ENSCAFG00000001231	-	93	99.153	MGP_CAROLIEiJ_G0021308	Snrpc	74	99.153	Mus_caroli
ENSCAFG00000001231	-	93	99.153	ENSMUSG00000024217	Snrpc	74	99.153	Mus_musculus
ENSCAFG00000001231	-	93	99.153	MGP_SPRETEiJ_G0022221	-	98	99.153	Mus_spretus
ENSCAFG00000001231	-	91	99.138	ENSMPUG00000003210	SNRPC	73	99.138	Mustela_putorius_furo
ENSCAFG00000001231	-	91	99.138	ENSMLUG00000002488	SNRPC	73	99.138	Myotis_lucifugus
ENSCAFG00000001231	-	93	99.153	ENSNGAG00000019686	Snrpc	74	99.153	Nannospalax_galili
ENSCAFG00000001231	-	93	100.000	ENSNLEG00000034810	SNRPC	74	100.000	Nomascus_leucogenys
ENSCAFG00000001231	-	80	99.010	ENSMEUG00000009300	SNRPC	71	99.010	Notamacropus_eugenii
ENSCAFG00000001231	-	93	99.153	ENSODEG00000019633	-	74	99.153	Octodon_degus
ENSCAFG00000001231	-	76	93.814	ENSODEG00000006008	-	69	94.792	Octodon_degus
ENSCAFG00000001231	-	93	100.000	ENSODEG00000017080	-	74	100.000	Octodon_degus
ENSCAFG00000001231	-	93	99.153	ENSODEG00000020201	-	74	99.153	Octodon_degus
ENSCAFG00000001231	-	93	100.000	ENSODEG00000020370	-	74	100.000	Octodon_degus
ENSCAFG00000001231	-	93	100.000	ENSODEG00000018985	-	74	100.000	Octodon_degus
ENSCAFG00000001231	-	81	93.458	ENSOANG00000003405	SNRPC	72	93.458	Ornithorhynchus_anatinus
ENSCAFG00000001231	-	94	99.167	ENSOCUG00000026430	-	75	99.167	Oryctolagus_cuniculus
ENSCAFG00000001231	-	93	98.305	ENSOCUG00000023292	-	74	98.305	Oryctolagus_cuniculus
ENSCAFG00000001231	-	93	100.000	ENSOCUG00000026668	-	74	100.000	Oryctolagus_cuniculus
ENSCAFG00000001231	-	93	97.458	ENSOGAG00000026269	-	74	97.458	Otolemur_garnettii
ENSCAFG00000001231	-	82	82.692	ENSOGAG00000028405	-	67	82.692	Otolemur_garnettii
ENSCAFG00000001231	-	91	99.138	ENSOGAG00000008755	-	65	99.138	Otolemur_garnettii
ENSCAFG00000001231	-	93	100.000	ENSOARG00000010823	SNRPC	74	100.000	Ovis_aries
ENSCAFG00000001231	-	93	100.000	ENSPPAG00000043871	SNRPC	74	100.000	Pan_paniscus
ENSCAFG00000001231	-	58	53.333	ENSPPRG00000016017	-	55	57.447	Panthera_pardus
ENSCAFG00000001231	-	93	100.000	ENSPPRG00000008647	-	74	100.000	Panthera_pardus
ENSCAFG00000001231	-	96	56.204	ENSPPRG00000010967	-	88	54.545	Panthera_pardus
ENSCAFG00000001231	-	93	100.000	ENSPTIG00000021867	-	74	100.000	Panthera_tigris_altaica
ENSCAFG00000001231	-	69	81.609	ENSPTIG00000013329	-	50	83.117	Panthera_tigris_altaica
ENSCAFG00000001231	-	93	100.000	ENSPTRG00000018070	SNRPC	74	100.000	Pan_troglodytes
ENSCAFG00000001231	-	93	100.000	ENSPANG00000022802	-	74	100.000	Papio_anubis
ENSCAFG00000001231	-	80	89.216	ENSPANG00000018228	-	61	89.423	Papio_anubis
ENSCAFG00000001231	-	74	87.234	ENSPKIG00000003136	snrpc	50	92.308	Paramormyrops_kingsleyae
ENSCAFG00000001231	-	91	96.552	ENSPSIG00000004876	SNRPC	57	96.552	Pelodiscus_sinensis
ENSCAFG00000001231	-	93	83.898	ENSPEMG00000002763	-	63	89.583	Peromyscus_maniculatus_bairdii
ENSCAFG00000001231	-	93	99.153	ENSPEMG00000010773	Snrpc	74	99.153	Peromyscus_maniculatus_bairdii
ENSCAFG00000001231	-	65	100.000	ENSPPYG00000029902	-	84	100.000	Pongo_abelii
ENSCAFG00000001231	-	99	92.063	ENSPCAG00000016885	SNRPC	72	92.063	Procavia_capensis
ENSCAFG00000001231	-	93	100.000	ENSPCOG00000004904	SNRPC	74	100.000	Propithecus_coquereli
ENSCAFG00000001231	-	91	98.276	ENSPVAG00000015597	SNRPC	64	98.276	Pteropus_vampyrus
ENSCAFG00000001231	-	93	99.153	ENSRNOG00000000493	Snrpc	74	99.153	Rattus_norvegicus
ENSCAFG00000001231	-	93	99.153	ENSRBIG00000022998	-	74	99.153	Rhinopithecus_bieti
ENSCAFG00000001231	-	93	99.153	ENSRBIG00000014819	-	74	99.153	Rhinopithecus_bieti
ENSCAFG00000001231	-	93	100.000	ENSRBIG00000037567	-	74	100.000	Rhinopithecus_bieti
ENSCAFG00000001231	-	93	100.000	ENSRROG00000041300	SNRPC	74	100.000	Rhinopithecus_roxellana
ENSCAFG00000001231	-	93	82.203	ENSSBOG00000023189	-	58	86.458	Saimiri_boliviensis_boliviensis
ENSCAFG00000001231	-	91	80.870	ENSSBOG00000032361	-	66	81.250	Saimiri_boliviensis_boliviensis
ENSCAFG00000001231	-	93	100.000	ENSSBOG00000031528	-	74	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00000001231	-	61	89.610	ENSSHAG00000002972	-	93	65.625	Sarcophilus_harrisii
ENSCAFG00000001231	-	99	92.063	ENSSHAG00000000945	-	70	92.063	Sarcophilus_harrisii
ENSCAFG00000001231	-	72	85.870	ENSSFOG00015022422	snrpc	50	92.308	Scleropages_formosus
ENSCAFG00000001231	-	93	98.305	ENSSPUG00000002502	SNRPC	74	98.305	Sphenodon_punctatus
ENSCAFG00000001231	-	93	100.000	ENSSSCG00000001531	SNRPC	74	100.000	Sus_scrofa
ENSCAFG00000001231	-	92	98.291	ENSTGUG00000001773	SNRPC	74	98.291	Taeniopygia_guttata
ENSCAFG00000001231	-	76	91.667	ENSTBEG00000015356	-	68	91.667	Tupaia_belangeri
ENSCAFG00000001231	-	77	92.857	ENSTBEG00000013022	-	62	92.708	Tupaia_belangeri
ENSCAFG00000001231	-	94	96.639	ENSTTRG00000007827	SNRPC	65	96.639	Tursiops_truncatus
ENSCAFG00000001231	-	93	100.000	ENSUAMG00000014125	SNRPC	80	100.000	Ursus_americanus
ENSCAFG00000001231	-	93	100.000	ENSUMAG00000010869	SNRPC	66	100.000	Ursus_maritimus
ENSCAFG00000001231	-	89	94.690	ENSVVUG00000010467	-	52	96.774	Vulpes_vulpes
ENSCAFG00000001231	-	93	98.305	ENSVVUG00000021947	-	74	98.305	Vulpes_vulpes