EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000001255 (Gene tree)
Gene ID: 481240
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: adenylosuccinate lyase
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 221932 bases
Position: chr10:24808952-25030883
Accession: 474499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037948	Ago_hook	PF10427.9	1e-19	1	1
ENSCAFP00000035857	Ago_hook	PF10427.9	1.2e-19	1	1
ENSCAFP00000001834	Ago_hook	PF10427.9	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000001986	TNRC6B-204	5175	XM_005625853	ENSCAFP00000001834	1725 (aa)	XP_022280103	F1PND4
ENSCAFT00000045467	TNRC6B-201	11706	-	ENSCAFP00000035857	2211 (aa)	-	J9JHC8
ENSCAFT00000047971	TNRC6B-203	5517	XM_005625852	ENSCAFP00000037948	1838 (aa)	XP_013972814	J9NXD6
ENSCAFT00000001904	TNRC6B-202	1473	XM_531727	ENSCAFP00000001755	490 (aa)	XP_531727	E2RGK2

Gene Model

Click here to download ENSCAFG00000001255's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa00230	Purine metabolism	KEGG
cfa00250	Alanine, aspartate and glutamate metabolism	KEGG
cfa01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000001255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000001255	TNRC6B	99	42.699	ENSCAFG00000017531	TNRC6A	97	36.760
ENSCAFG00000001255	TNRC6B	99	41.376	ENSCAFG00000005224	TNRC6C	99	41.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000001255	TNRC6B	100	97.219	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSCAFG00000001255	TNRC6B	99	99.184	ENSAMEG00000011025	TNRC6B	99	99.184	Ailuropoda_melanoleuca
ENSCAFG00000001255	TNRC6B	98	88.146	ENSAPLG00000009347	TNRC6B	100	88.146	Anas_platyrhynchos
ENSCAFG00000001255	TNRC6B	100	71.971	ENSACAG00000007281	TNRC6B	99	70.435	Anolis_carolinensis
ENSCAFG00000001255	TNRC6B	100	97.219	ENSANAG00000035042	TNRC6B	99	97.219	Aotus_nancymaae
ENSCAFG00000001255	TNRC6B	86	45.668	ENSAMXG00000008707	tnrc6b	84	46.352	Astyanax_mexicanus
ENSCAFG00000001255	TNRC6B	100	96.929	ENSBTAG00000021076	TNRC6B	100	96.899	Bos_taurus
ENSCAFG00000001255	TNRC6B	99	96.953	ENSCJAG00000002732	TNRC6B	99	99.437	Callithrix_jacchus
ENSCAFG00000001255	TNRC6B	100	96.288	ENSCAFG00020002189	TNRC6B	99	98.347	Canis_lupus_dingo
ENSCAFG00000001255	TNRC6B	100	94.101	ENSCHIG00000003491	TNRC6B	96	96.992	Capra_hircus
ENSCAFG00000001255	TNRC6B	100	96.987	ENSTSYG00000011836	TNRC6B	99	96.987	Carlito_syrichta
ENSCAFG00000001255	TNRC6B	100	96.470	ENSCPOG00000005705	TNRC6B	98	96.470	Cavia_porcellus
ENSCAFG00000001255	TNRC6B	99	95.919	ENSCCAG00000019912	TNRC6B	99	95.919	Cebus_capucinus
ENSCAFG00000001255	TNRC6B	99	96.411	ENSCATG00000029291	TNRC6B	99	96.411	Cercocebus_atys
ENSCAFG00000001255	TNRC6B	100	93.483	ENSCLAG00000016942	TNRC6B	96	96.402	Chinchilla_lanigera
ENSCAFG00000001255	TNRC6B	99	90.000	ENSCSAG00000006021	TNRC6B	96	92.782	Chlorocebus_sabaeus
ENSCAFG00000001255	TNRC6B	92	87.052	ENSCPBG00000022932	TNRC6B	99	86.763	Chrysemys_picta_bellii
ENSCAFG00000001255	TNRC6B	100	96.699	ENSCANG00000030776	TNRC6B	99	96.699	Colobus_angolensis_palliatus
ENSCAFG00000001255	TNRC6B	96	92.204	ENSCGRG00001020166	Tnrc6b	99	95.086	Cricetulus_griseus_chok1gshd
ENSCAFG00000001255	TNRC6B	99	92.329	ENSCGRG00000016696	Tnrc6b	99	92.147	Cricetulus_griseus_crigri
ENSCAFG00000001255	TNRC6B	99	96.300	ENSDNOG00000012744	TNRC6B	99	96.300	Dasypus_novemcinctus
ENSCAFG00000001255	TNRC6B	100	93.270	ENSDORG00000003386	Tnrc6b	97	95.915	Dipodomys_ordii
ENSCAFG00000001255	TNRC6B	99	87.835	ENSETEG00000006570	TNRC6B	99	88.242	Echinops_telfairi
ENSCAFG00000001255	TNRC6B	99	97.551	ENSEASG00005005306	TNRC6B	99	97.551	Equus_asinus_asinus
ENSCAFG00000001255	TNRC6B	99	98.749	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSCAFG00000001255	TNRC6B	62	97.436	ENSEEUG00000008690	-	62	97.436	Erinaceus_europaeus
ENSCAFG00000001255	TNRC6B	99	98.914	ENSFCAG00000004791	TNRC6B	99	98.914	Felis_catus
ENSCAFG00000001255	TNRC6B	95	85.588	ENSFALG00000012195	TNRC6B	96	88.610	Ficedula_albicollis
ENSCAFG00000001255	TNRC6B	100	93.371	ENSFDAG00000021368	TNRC6B	96	96.630	Fukomys_damarensis
ENSCAFG00000001255	TNRC6B	95	91.736	ENSGALG00000012050	TNRC6B	94	89.052	Gallus_gallus
ENSCAFG00000001255	TNRC6B	99	88.575	ENSGAGG00000025188	TNRC6B	98	88.357	Gopherus_agassizii
ENSCAFG00000001255	TNRC6B	100	97.161	ENSGGOG00000008444	TNRC6B	99	97.161	Gorilla_gorilla
ENSCAFG00000001255	TNRC6B	99	96.308	ENSHGLG00000009306	TNRC6B	100	96.177	Heterocephalus_glaber_female
ENSCAFG00000001255	TNRC6B	100	92.989	ENSHGLG00100018108	TNRC6B	96	96.229	Heterocephalus_glaber_male
ENSCAFG00000001255	TNRC6B	81	46.993	ENSIPUG00000001515	tnrc6b	93	45.899	Ictalurus_punctatus
ENSCAFG00000001255	TNRC6B	100	93.985	ENSSTOG00000008927	TNRC6B	96	96.743	Ictidomys_tridecemlineatus
ENSCAFG00000001255	TNRC6B	99	92.482	ENSJJAG00000015779	Tnrc6b	96	95.543	Jaculus_jaculus
ENSCAFG00000001255	TNRC6B	99	60.180	ENSLACG00000000628	-	99	61.044	Latimeria_chalumnae
ENSCAFG00000001255	TNRC6B	78	96.319	ENSLAFG00000014473	TNRC6B	100	96.319	Loxodonta_africana
ENSCAFG00000001255	TNRC6B	99	96.411	ENSMFAG00000003862	TNRC6B	99	96.411	Macaca_fascicularis
ENSCAFG00000001255	TNRC6B	99	96.929	ENSMMUG00000021345	TNRC6B	99	96.929	Macaca_mulatta
ENSCAFG00000001255	TNRC6B	99	96.970	ENSMNEG00000042745	TNRC6B	100	96.970	Macaca_nemestrina
ENSCAFG00000001255	TNRC6B	100	96.931	ENSMLEG00000041780	TNRC6B	99	96.931	Mandrillus_leucophaeus
ENSCAFG00000001255	TNRC6B	99	89.365	ENSMGAG00000012333	TNRC6B	99	88.986	Meleagris_gallopavo
ENSCAFG00000001255	TNRC6B	99	92.090	ENSMAUG00000016123	Tnrc6b	98	91.921	Mesocricetus_auratus
ENSCAFG00000001255	TNRC6B	100	97.336	ENSMICG00000014056	TNRC6B	100	97.101	Microcebus_murinus
ENSCAFG00000001255	TNRC6B	96	95.000	ENSMOCG00000020334	Tnrc6b	96	96.269	Microtus_ochrogaster
ENSCAFG00000001255	TNRC6B	99	91.869	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	94.749	Mus_caroli
ENSCAFG00000001255	TNRC6B	99	91.813	ENSMUSG00000047888	Tnrc6b	99	94.404	Mus_musculus
ENSCAFG00000001255	TNRC6B	99	91.695	MGP_PahariEiJ_G0020045	Tnrc6b	96	94.346	Mus_pahari
ENSCAFG00000001255	TNRC6B	99	94.973	MGP_SPRETEiJ_G0020941	Tnrc6b	97	95.027	Mus_spretus
ENSCAFG00000001255	TNRC6B	96	99.049	ENSMPUG00000016442	TNRC6B	100	95.377	Mustela_putorius_furo
ENSCAFG00000001255	TNRC6B	100	97.171	ENSMLUG00000008765	TNRC6B	100	97.171	Myotis_lucifugus
ENSCAFG00000001255	TNRC6B	99	92.381	ENSNGAG00000021294	Tnrc6b	96	95.094	Nannospalax_galili
ENSCAFG00000001255	TNRC6B	89	97.225	ENSNLEG00000015311	TNRC6B	94	97.577	Nomascus_leucogenys
ENSCAFG00000001255	TNRC6B	90	93.949	ENSOPRG00000012054	TNRC6B	88	94.175	Ochotona_princeps
ENSCAFG00000001255	TNRC6B	100	93.501	ENSODEG00000013146	TNRC6B	96	96.804	Octodon_degus
ENSCAFG00000001255	TNRC6B	93	44.115	ENSONIG00000019679	-	99	40.217	Oreochromis_niloticus
ENSCAFG00000001255	TNRC6B	99	93.103	ENSOCUG00000016128	TNRC6B	96	95.771	Oryctolagus_cuniculus
ENSCAFG00000001255	TNRC6B	99	96.683	ENSOGAG00000011096	TNRC6B	99	96.683	Otolemur_garnettii
ENSCAFG00000001255	TNRC6B	100	93.788	ENSOARG00000017238	TNRC6B	96	96.701	Ovis_aries
ENSCAFG00000001255	TNRC6B	100	97.219	ENSPPAG00000028514	TNRC6B	99	97.219	Pan_paniscus
ENSCAFG00000001255	TNRC6B	100	98.899	ENSPPRG00000017741	TNRC6B	99	98.899	Panthera_pardus
ENSCAFG00000001255	TNRC6B	99	93.999	ENSPTIG00000022064	TNRC6B	98	95.558	Panthera_tigris_altaica
ENSCAFG00000001255	TNRC6B	100	97.277	ENSPTRG00000047826	TNRC6B	99	97.277	Pan_troglodytes
ENSCAFG00000001255	TNRC6B	98	91.430	ENSPANG00000009271	TNRC6B	99	91.538	Papio_anubis
ENSCAFG00000001255	TNRC6B	99	85.827	ENSPSIG00000005318	TNRC6B	96	88.201	Pelodiscus_sinensis
ENSCAFG00000001255	TNRC6B	99	91.554	ENSPEMG00000011403	Tnrc6b	96	94.755	Peromyscus_maniculatus_bairdii
ENSCAFG00000001255	TNRC6B	99	87.521	ENSPCIG00000020347	TNRC6B	99	87.631	Phascolarctos_cinereus
ENSCAFG00000001255	TNRC6B	91	42.336	ENSPFOG00000006033	-	95	44.005	Poecilia_formosa
ENSCAFG00000001255	TNRC6B	67	45.061	ENSPLAG00000001418	-	89	47.192	Poecilia_latipinna
ENSCAFG00000001255	TNRC6B	71	54.054	ENSPMEG00000006371	-	56	54.739	Poecilia_mexicana
ENSCAFG00000001255	TNRC6B	100	96.871	ENSPPYG00000011849	TNRC6B	99	96.871	Pongo_abelii
ENSCAFG00000001255	TNRC6B	75	93.416	ENSPCAG00000008739	TNRC6B	75	91.919	Procavia_capensis
ENSCAFG00000001255	TNRC6B	100	97.394	ENSPCOG00000020790	TNRC6B	99	97.394	Propithecus_coquereli
ENSCAFG00000001255	TNRC6B	93	96.552	ENSPVAG00000004975	TNRC6B	92	96.829	Pteropus_vampyrus
ENSCAFG00000001255	TNRC6B	61	52.196	ENSPNAG00000011713	tnrc6b	72	47.468	Pygocentrus_nattereri
ENSCAFG00000001255	TNRC6B	99	91.507	ENSRNOG00000024907	Tnrc6b	98	94.198	Rattus_norvegicus
ENSCAFG00000001255	TNRC6B	100	96.699	ENSRBIG00000035576	TNRC6B	99	96.699	Rhinopithecus_bieti
ENSCAFG00000001255	TNRC6B	99	96.629	ENSRROG00000031135	TNRC6B	100	96.620	Rhinopithecus_roxellana
ENSCAFG00000001255	TNRC6B	99	97.203	ENSSBOG00000029743	TNRC6B	100	97.203	Saimiri_boliviensis_boliviensis
ENSCAFG00000001255	TNRC6B	99	87.418	ENSSHAG00000009692	TNRC6B	99	87.745	Sarcophilus_harrisii
ENSCAFG00000001255	TNRC6B	71	85.621	ENSSARG00000007971	-	70	95.455	Sorex_araneus
ENSCAFG00000001255	TNRC6B	92	87.974	ENSSPUG00000010801	TNRC6B	100	87.500	Sphenodon_punctatus
ENSCAFG00000001255	TNRC6B	99	97.497	ENSSSCG00000000078	TNRC6B	98	97.497	Sus_scrofa
ENSCAFG00000001255	TNRC6B	93	87.998	ENSTGUG00000010138	-	99	87.687	Taeniopygia_guttata
ENSCAFG00000001255	TNRC6B	100	94.612	ENSTTRG00000011465	TNRC6B	96	98.010	Tursiops_truncatus
ENSCAFG00000001255	TNRC6B	99	98.024	ENSUAMG00000007174	TNRC6B	99	98.024	Ursus_americanus
ENSCAFG00000001255	TNRC6B	99	95.826	ENSUMAG00000014336	TNRC6B	100	95.927	Ursus_maritimus
ENSCAFG00000001255	TNRC6B	69	91.295	ENSVPAG00000001467	TNRC6B	75	90.909	Vicugna_pacos
ENSCAFG00000001255	TNRC6B	100	99.884	ENSVVUG00000007064	TNRC6B	98	99.884	Vulpes_vulpes