EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00000001400 (Gene tree)
Gene ID
607245
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Minus strand
Length
12297 bases
Position
chr13:37375551-37387847
Accession
51779
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000040466RRM_1PF00076.221.6e-4312
ENSCAFP00000040466RRM_1PF00076.221.6e-4322
ENSCAFP00000002007RRM_1PF00076.221.7e-4312
ENSCAFP00000002007RRM_1PF00076.221.7e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000002168-1862XM_005628044ENSCAFP00000002007543 (aa)XP_005628101E2RA48
ENSCAFT00000045695-1683XM_005628046ENSCAFP00000040466560 (aa)XP_005628103J9P4I7
Gene Model
Click here to download ENSCAFG00000001400's gene model file
Pathways
Pathway IDPathway NameSource
cfa03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000001400's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00000001400PUF605035.227ENSCAFG00000011217RBM236335.165
ENSCAFG00000001400PUF605935.294ENSCAFG00000002551U2AF26137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000001400PUF6010099.448ENSG00000179950PUF6010099.599Homo_sapiens
ENSCAFG00000001400PUF609385.227ENSAPOG00000001713puf60b9985.227Acanthochromis_polyacanthus
ENSCAFG00000001400PUF609997.283ENSAMEG00000006406PUF609997.283Ailuropoda_melanoleuca
ENSCAFG00000001400PUF609276.967ENSACIG00000003263-9977.395Amphilophus_citrinellus
ENSCAFG00000001400PUF609285.029ENSACIG00000021705puf60b10085.029Amphilophus_citrinellus
ENSCAFG00000001400PUF609679.667ENSAOCG00000015558-9981.559Amphiprion_ocellaris
ENSCAFG00000001400PUF609385.199ENSAOCG00000005395puf60b10085.988Amphiprion_ocellaris
ENSCAFG00000001400PUF609382.779ENSAPEG00000011923puf60b9982.779Amphiprion_percula
ENSCAFG00000001400PUF609275.397ENSAPEG00000001836-9976.667Amphiprion_percula
ENSCAFG00000001400PUF609380.762ENSATEG00000006303-9981.143Anabas_testudineus
ENSCAFG00000001400PUF609385.038ENSATEG00000001730puf60b9985.038Anabas_testudineus
ENSCAFG00000001400PUF609398.084ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSCAFG00000001400PUF609396.183ENSACAG00000001645PUF609795.825Anolis_carolinensis
ENSCAFG00000001400PUF609997.687ENSANAG00000018626PUF6010099.225Aotus_nancymaae
ENSCAFG00000001400PUF609285.029ENSACLG00000004462puf60b10085.029Astatotilapia_calliptera
ENSCAFG00000001400PUF609276.075ENSAMXG00000041030puf60b10074.345Astyanax_mexicanus
ENSCAFG00000001400PUF609385.127ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSCAFG00000001400PUF6010099.266ENSBTAG00000037493PUF6010099.266Bos_taurus
ENSCAFG00000001400PUF607750.825WBGene00004389rnp-68949.845Caenorhabditis_elegans
ENSCAFG00000001400PUF6010099.086ENSCJAG00000021485PUF6010099.086Callithrix_jacchus
ENSCAFG00000001400PUF60100100.000ENSCAFG00020018754PUF60100100.000Canis_lupus_dingo
ENSCAFG00000001400PUF6010098.750ENSCHIG00000001618PUF609398.750Capra_hircus
ENSCAFG00000001400PUF6010096.809ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSCAFG00000001400PUF609993.542ENSCPOG00000014613PUF609993.542Cavia_porcellus
ENSCAFG00000001400PUF6010099.084ENSCCAG00000007744PUF6010099.084Cebus_capucinus
ENSCAFG00000001400PUF6010099.448ENSCATG00000035405PUF6010099.448Cercocebus_atys
ENSCAFG00000001400PUF6010099.086ENSCLAG00000009154PUF6010099.086Chinchilla_lanigera
ENSCAFG00000001400PUF609299.225ENSCSAG00000008878PUF6010099.225Chlorocebus_sabaeus
ENSCAFG00000001400PUF609398.084ENSCPBG00000005595PUF609898.084Chrysemys_picta_bellii
ENSCAFG00000001400PUF605763.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSCAFG00000001400PUF609348.876ENSCING00000008436-9848.956Ciona_intestinalis
ENSCAFG00000001400PUF608950.820ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSCAFG00000001400PUF609055.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSCAFG00000001400PUF608099.312ENSCANG00000041843PUF6010099.312Colobus_angolensis_palliatus
ENSCAFG00000001400PUF6010098.355ENSCGRG00001017442Puf6010098.355Cricetulus_griseus_chok1gshd
ENSCAFG00000001400PUF609997.326ENSCGRG00000003717Puf609997.326Cricetulus_griseus_crigri
ENSCAFG00000001400PUF609275.099ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSCAFG00000001400PUF609384.440ENSCSEG00000019887puf60b9384.250Cynoglossus_semilaevis
ENSCAFG00000001400PUF609284.261ENSCVAG00000009386puf60b10085.413Cyprinodon_variegatus
ENSCAFG00000001400PUF608381.015ENSCVAG00000001560-9879.325Cyprinodon_variegatus
ENSCAFG00000001400PUF609278.571ENSDARG00000001241puf60b9994.444Danio_rerio
ENSCAFG00000001400PUF609286.553ENSDARG00000032175puf60a9993.191Danio_rerio
ENSCAFG00000001400PUF6010081.206ENSDNOG00000043278PUF6010081.206Dasypus_novemcinctus
ENSCAFG00000001400PUF609999.439ENSDORG00000004585Puf6010099.439Dipodomys_ordii
ENSCAFG00000001400PUF609050.973FBgn0028577hfp9946.346Drosophila_melanogaster
ENSCAFG00000001400PUF609362.651ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSCAFG00000001400PUF609072.485ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSCAFG00000001400PUF60100100.000ENSEASG00005009695PUF60100100.000Equus_asinus_asinus
ENSCAFG00000001400PUF609999.813ENSECAG00000024681PUF609999.813Equus_caballus
ENSCAFG00000001400PUF609683.303ENSELUG00000018443-9985.799Esox_lucius
ENSCAFG00000001400PUF609383.112ENSELUG00000006507puf60b9980.037Esox_lucius
ENSCAFG00000001400PUF6010098.903ENSFCAG00000001045PUF6010099.225Felis_catus
ENSCAFG00000001400PUF609385.441ENSFALG00000001136PUF609886.590Ficedula_albicollis
ENSCAFG00000001400PUF6010098.720ENSFDAG00000017177PUF6010098.720Fukomys_damarensis
ENSCAFG00000001400PUF608878.916ENSFHEG00000021687PUF6010079.755Fundulus_heteroclitus
ENSCAFG00000001400PUF609383.871ENSFHEG00000020046puf60b10085.797Fundulus_heteroclitus
ENSCAFG00000001400PUF609371.429ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSCAFG00000001400PUF606197.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSCAFG00000001400PUF609383.302ENSGAFG00000021040puf60b10085.221Gambusia_affinis
ENSCAFG00000001400PUF609279.641ENSGAFG00000004334-9979.042Gambusia_affinis
ENSCAFG00000001400PUF609370.000ENSGACG00000001484-10069.038Gasterosteus_aculeatus
ENSCAFG00000001400PUF609372.968ENSGACG00000004717puf60b9872.296Gasterosteus_aculeatus
ENSCAFG00000001400PUF609398.416ENSGAGG00000013289PUF609298.416Gopherus_agassizii
ENSCAFG00000001400PUF6010099.448ENSGGOG00000004646PUF6010099.448Gorilla_gorilla
ENSCAFG00000001400PUF609384.250ENSHBUG00000015118puf60b10085.029Haplochromis_burtoni
ENSCAFG00000001400PUF609282.738ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSCAFG00000001400PUF6010098.720ENSHGLG00000006111PUF6010098.720Heterocephalus_glaber_female
ENSCAFG00000001400PUF6010098.720ENSHGLG00100012362PUF6010098.720Heterocephalus_glaber_male
ENSCAFG00000001400PUF609381.768ENSHCOG00000015541puf60b10081.365Hippocampus_comes
ENSCAFG00000001400PUF609166.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSCAFG00000001400PUF609278.383ENSIPUG00000004660puf60b9978.154Ictalurus_punctatus
ENSCAFG00000001400PUF609978.428ENSIPUG00000002453puf60a9982.490Ictalurus_punctatus
ENSCAFG00000001400PUF609998.032ENSSTOG00000025037PUF609998.032Ictidomys_tridecemlineatus
ENSCAFG00000001400PUF6010099.083ENSJJAG00000001076Puf6010099.083Jaculus_jaculus
ENSCAFG00000001400PUF609284.645ENSKMAG00000016745puf60b10085.797Kryptolebias_marmoratus
ENSCAFG00000001400PUF609278.072ENSKMAG00000010106-10075.560Kryptolebias_marmoratus
ENSCAFG00000001400PUF609683.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSCAFG00000001400PUF606790.710ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSCAFG00000001400PUF609489.266ENSLOCG00000010106puf60b9988.973Lepisosteus_oculatus
ENSCAFG00000001400PUF6010096.429ENSLAFG00000022929PUF6010096.780Loxodonta_africana
ENSCAFG00000001400PUF6010099.448ENSMFAG00000043373PUF6010099.448Macaca_fascicularis
ENSCAFG00000001400PUF6010099.632ENSMMUG00000013558PUF6010099.632Macaca_mulatta
ENSCAFG00000001400PUF6010099.448ENSMNEG00000031099PUF6010099.448Macaca_nemestrina
ENSCAFG00000001400PUF609299.599ENSMLEG00000040009PUF6010099.599Mandrillus_leucophaeus
ENSCAFG00000001400PUF609382.163ENSMAMG00000019476-9981.784Mastacembelus_armatus
ENSCAFG00000001400PUF609484.586ENSMAMG00000010394puf60b10083.364Mastacembelus_armatus
ENSCAFG00000001400PUF609381.594ENSMZEG00005019425-9981.594Maylandia_zebra
ENSCAFG00000001400PUF609285.029ENSMZEG00005018515puf60b10085.029Maylandia_zebra
ENSCAFG00000001400PUF609398.084ENSMGAG00000013070PUF609898.084Meleagris_gallopavo
ENSCAFG00000001400PUF6010076.277ENSMAUG00000018549-10076.503Mesocricetus_auratus
ENSCAFG00000001400PUF607198.210ENSMAUG00000014267-10098.210Mesocricetus_auratus
ENSCAFG00000001400PUF609998.032ENSMICG00000012226PUF609999.617Microcebus_murinus
ENSCAFG00000001400PUF6010098.537ENSMOCG00000018780Puf6010098.537Microtus_ochrogaster
ENSCAFG00000001400PUF609375.394ENSMMOG00000018059-9976.712Mola_mola
ENSCAFG00000001400PUF609285.413ENSMMOG00000004217puf60b10085.413Mola_mola
ENSCAFG00000001400PUF6010097.790ENSMODG00000009161PUF6010097.790Monodelphis_domestica
ENSCAFG00000001400PUF609377.462ENSMALG00000006797puf60b9977.462Monopterus_albus
ENSCAFG00000001400PUF609380.266ENSMALG00000000200-9978.868Monopterus_albus
ENSCAFG00000001400PUF6010098.355MGP_CAROLIEiJ_G0019910Puf6010098.355Mus_caroli
ENSCAFG00000001400PUF6010098.355ENSMUSG00000002524Puf6010098.355Mus_musculus
ENSCAFG00000001400PUF6010098.355MGP_PahariEiJ_G0019920Puf6010098.355Mus_pahari
ENSCAFG00000001400PUF6010098.355MGP_SPRETEiJ_G0020812Puf6010098.355Mus_spretus
ENSCAFG00000001400PUF609998.736ENSMPUG00000008137PUF609898.736Mustela_putorius_furo
ENSCAFG00000001400PUF6010098.036ENSMLUG00000000238-9998.036Myotis_lucifugus
ENSCAFG00000001400PUF609395.446ENSMLUG00000013032-9895.446Myotis_lucifugus
ENSCAFG00000001400PUF6010098.720ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSCAFG00000001400PUF607583.765ENSNBRG00000013047puf60b9783.765Neolamprologus_brichardi
ENSCAFG00000001400PUF609382.061ENSNBRG00000017223-9981.749Neolamprologus_brichardi
ENSCAFG00000001400PUF6010099.448ENSNLEG00000002156PUF6010099.448Nomascus_leucogenys
ENSCAFG00000001400PUF606998.976ENSOPRG00000002147PUF607598.976Ochotona_princeps
ENSCAFG00000001400PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSCAFG00000001400PUF609073.767ENSODEG00000015513-9970.998Octodon_degus
ENSCAFG00000001400PUF609381.818ENSONIG00000014030-9981.818Oreochromis_niloticus
ENSCAFG00000001400PUF609384.280ENSONIG00000006247puf60b9984.280Oreochromis_niloticus
ENSCAFG00000001400PUF609178.125ENSOANG00000006962PUF609978.125Ornithorhynchus_anatinus
ENSCAFG00000001400PUF609384.440ENSORLG00000012279puf60b10084.645Oryzias_latipes
ENSCAFG00000001400PUF609278.409ENSORLG00000028655-9978.517Oryzias_latipes
ENSCAFG00000001400PUF609384.440ENSORLG00020007333puf6010084.645Oryzias_latipes_hni
ENSCAFG00000001400PUF609378.302ENSORLG00020018144-9878.409Oryzias_latipes_hni
ENSCAFG00000001400PUF609383.554ENSORLG00015007718puf60b10084.512Oryzias_latipes_hsok
ENSCAFG00000001400PUF609378.558ENSORLG00015016833-9878.667Oryzias_latipes_hsok
ENSCAFG00000001400PUF609379.843ENSOMEG00000022185-9879.317Oryzias_melastigma
ENSCAFG00000001400PUF609381.970ENSOMEG00000001643puf60b10082.143Oryzias_melastigma
ENSCAFG00000001400PUF6010099.107ENSOGAG00000006259PUF6010099.107Otolemur_garnettii
ENSCAFG00000001400PUF609396.750ENSOARG00000016235PUF609996.750Ovis_aries
ENSCAFG00000001400PUF6010099.448ENSPPAG00000029933PUF6010099.448Pan_paniscus
ENSCAFG00000001400PUF609997.513ENSPPRG00000003257PUF6010099.599Panthera_pardus
ENSCAFG00000001400PUF609998.881ENSPTIG00000009795PUF609997.318Panthera_tigris_altaica
ENSCAFG00000001400PUF6010098.750ENSPTRG00000043963-10098.750Pan_troglodytes
ENSCAFG00000001400PUF6010099.263ENSPTRG00000020670PUF6010099.263Pan_troglodytes
ENSCAFG00000001400PUF6010099.448ENSPANG00000021936PUF6010099.448Papio_anubis
ENSCAFG00000001400PUF609386.882ENSPKIG00000012204puf60b10087.692Paramormyrops_kingsleyae
ENSCAFG00000001400PUF609883.799ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSCAFG00000001400PUF609397.897ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSCAFG00000001400PUF609283.969ENSPMGG00000013444puf60b9983.969Periophthalmus_magnuspinnatus
ENSCAFG00000001400PUF6010098.537ENSPEMG00000008820Puf6010098.537Peromyscus_maniculatus_bairdii
ENSCAFG00000001400PUF609895.811ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSCAFG00000001400PUF609483.658ENSPFOG00000019217puf60b10084.825Poecilia_formosa
ENSCAFG00000001400PUF609280.539ENSPFOG00000011118-9780.888Poecilia_formosa
ENSCAFG00000001400PUF609877.215ENSPLAG00000017025-9080.502Poecilia_latipinna
ENSCAFG00000001400PUF609284.645ENSPLAG00000010754puf60b10085.797Poecilia_latipinna
ENSCAFG00000001400PUF609877.215ENSPMEG00000009767-9080.888Poecilia_mexicana
ENSCAFG00000001400PUF609383.871ENSPMEG00000000838puf60b10085.797Poecilia_mexicana
ENSCAFG00000001400PUF609282.738ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSCAFG00000001400PUF607497.362ENSPPYG00000018951-9597.362Pongo_abelii
ENSCAFG00000001400PUF607499.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSCAFG00000001400PUF609998.566ENSPCOG00000027981PUF609999.425Propithecus_coquereli
ENSCAFG00000001400PUF609299.234ENSPVAG00000016167PUF608199.234Pteropus_vampyrus
ENSCAFG00000001400PUF609285.029ENSPNYG00000002556puf60b10085.029Pundamilia_nyererei
ENSCAFG00000001400PUF609381.594ENSPNYG00000004273-9981.594Pundamilia_nyererei
ENSCAFG00000001400PUF609876.980ENSPNAG00000019415puf60b9176.699Pygocentrus_nattereri
ENSCAFG00000001400PUF609385.156ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSCAFG00000001400PUF6010098.355ENSRNOG00000009960Puf6010098.355Rattus_norvegicus
ENSCAFG00000001400PUF6010099.448ENSRBIG00000035274PUF6010099.448Rhinopithecus_bieti
ENSCAFG00000001400PUF6010099.448ENSRROG00000029360PUF6010099.448Rhinopithecus_roxellana
ENSCAFG00000001400PUF609795.933ENSSBOG00000027089PUF609897.656Saimiri_boliviensis_boliviensis
ENSCAFG00000001400PUF609195.661ENSSHAG00000006668PUF609695.661Sarcophilus_harrisii
ENSCAFG00000001400PUF608886.032ENSSFOG00015019619puf60b9986.032Scleropages_formosus
ENSCAFG00000001400PUF608886.519ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSCAFG00000001400PUF606891.873ENSSMAG00000016381puf60b7391.873Scophthalmus_maximus
ENSCAFG00000001400PUF609383.086ENSSDUG00000009935puf60b9984.040Seriola_dumerili
ENSCAFG00000001400PUF609379.771ENSSDUG00000007048-9880.153Seriola_dumerili
ENSCAFG00000001400PUF609385.171ENSSLDG00000024011puf60b10083.551Seriola_lalandi_dorsalis
ENSCAFG00000001400PUF609280.455ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSCAFG00000001400PUF606186.136ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSCAFG00000001400PUF609281.679ENSSPAG00000020285-10082.252Stegastes_partitus
ENSCAFG00000001400PUF609382.440ENSSPAG00000012144puf60b10083.738Stegastes_partitus
ENSCAFG00000001400PUF609998.734ENSSSCG00000038800PUF609899.208Sus_scrofa
ENSCAFG00000001400PUF609394.828ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSCAFG00000001400PUF609383.902ENSTRUG00000005420puf60b10082.430Takifugu_rubripes
ENSCAFG00000001400PUF609279.960ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSCAFG00000001400PUF609377.629ENSTNIG00000003069-10077.629Tetraodon_nigroviridis
ENSCAFG00000001400PUF609383.902ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSCAFG00000001400PUF607181.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSCAFG00000001400PUF605596.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSCAFG00000001400PUF609298.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSCAFG00000001400PUF6010099.632ENSUAMG00000024917PUF6010099.632Ursus_americanus
ENSCAFG00000001400PUF6010093.571ENSUMAG00000000272PUF6010093.929Ursus_maritimus
ENSCAFG00000001400PUF609999.627ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSCAFG00000001400PUF609493.893ENSXETG00000012469puf609994.831Xenopus_tropicalis
ENSCAFG00000001400PUF609284.524ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSCAFG00000001400PUF609383.871ENSXMAG00000001862puf60b10085.797Xiphophorus_maculatus
ENSCAFG00000001400PUF609380.512ENSXMAG00000010507-9979.724Xiphophorus_maculatus

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