EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000001499 (Gene tree)
Gene ID: 475196
Gene Symbol: -
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 21414 bases
Position: chr14:6831066-6852479
Accession: 475196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000002161	zf-C3HC	PF07967.13	3e-33	1	1
ENSCAFP00000002161	Rsm1	PF08600.10	1.3e-15	1	2
ENSCAFP00000002161	Rsm1	PF08600.10	1.3e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000002339	-	1539	XM_005628386	ENSCAFP00000002161	512 (aa)	XP_005628444	E2RJI6

Gene Model

Click here to download ENSCAFG00000001499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000001499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000001499	-	99	98.043	ENSCAFG00000029401	-	99	98.043
ENSCAFG00000001499	-	99	99.010	ENSCAFG00000031850	-	100	99.010
ENSCAFG00000001499	-	99	98.614	ENSCAFG00000028735	-	100	98.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000001499	-	98	92.857	ENSG00000091732	ZC3HC1	99	92.857	Homo_sapiens
ENSCAFG00000001499	-	93	44.378	ENSAPOG00000009078	zc3hc1	95	44.177	Acanthochromis_polyacanthus
ENSCAFG00000001499	-	99	94.257	ENSAMEG00000005425	ZC3HC1	100	94.257	Ailuropoda_melanoleuca
ENSCAFG00000001499	-	93	42.828	ENSACIG00000019513	zc3hc1	95	42.656	Amphilophus_citrinellus
ENSCAFG00000001499	-	93	45.181	ENSAOCG00000024310	zc3hc1	95	44.980	Amphiprion_ocellaris
ENSCAFG00000001499	-	93	45.181	ENSAPEG00000004907	zc3hc1	95	44.980	Amphiprion_percula
ENSCAFG00000001499	-	80	48.009	ENSATEG00000016898	zc3hc1	85	47.786	Anabas_testudineus
ENSCAFG00000001499	-	87	60.714	ENSAPLG00000003832	ZC3HC1	99	60.714	Anas_platyrhynchos
ENSCAFG00000001499	-	99	60.421	ENSACAG00000001638	ZC3HC1	100	60.421	Anolis_carolinensis
ENSCAFG00000001499	-	99	90.495	ENSANAG00000022213	ZC3HC1	100	90.495	Aotus_nancymaae
ENSCAFG00000001499	-	87	44.043	ENSACLG00000025033	zc3hc1	98	43.830	Astatotilapia_calliptera
ENSCAFG00000001499	-	93	43.093	ENSAMXG00000036792	zc3hc1	97	42.887	Astyanax_mexicanus
ENSCAFG00000001499	-	99	90.693	ENSBTAG00000011247	ZC3HC1	100	90.693	Bos_taurus
ENSCAFG00000001499	-	99	90.693	ENSCJAG00000010536	ZC3HC1	100	90.693	Callithrix_jacchus
ENSCAFG00000001499	-	99	98.812	ENSCAFG00020006829	-	100	98.812	Canis_lupus_dingo
ENSCAFG00000001499	-	99	98.218	ENSCAFG00020023333	-	100	98.218	Canis_lupus_dingo
ENSCAFG00000001499	-	99	84.356	ENSCHIG00000014103	ZC3HC1	100	84.356	Capra_hircus
ENSCAFG00000001499	-	99	88.713	ENSTSYG00000002843	ZC3HC1	100	88.713	Carlito_syrichta
ENSCAFG00000001499	-	89	63.617	ENSCAPG00000016300	ZC3HC1	93	74.126	Cavia_aperea
ENSCAFG00000001499	-	99	84.950	ENSCPOG00000014034	ZC3HC1	100	84.554	Cavia_porcellus
ENSCAFG00000001499	-	99	73.861	ENSCCAG00000020384	ZC3HC1	100	91.189	Cebus_capucinus
ENSCAFG00000001499	-	99	92.673	ENSCATG00000023130	ZC3HC1	100	92.673	Cercocebus_atys
ENSCAFG00000001499	-	99	60.990	ENSCLAG00000008260	ZC3HC1	100	60.870	Chinchilla_lanigera
ENSCAFG00000001499	-	71	92.896	ENSCSAG00000009881	ZC3HC1	97	92.896	Chlorocebus_sabaeus
ENSCAFG00000001499	-	89	90.529	ENSCHOG00000011846	ZC3HC1	99	90.529	Choloepus_hoffmanni
ENSCAFG00000001499	-	95	68.507	ENSCPBG00000017519	ZC3HC1	100	67.653	Chrysemys_picta_bellii
ENSCAFG00000001499	-	99	92.475	ENSCANG00000029091	ZC3HC1	100	92.475	Colobus_angolensis_palliatus
ENSCAFG00000001499	-	99	87.525	ENSCGRG00001018805	Zc3hc1	100	87.525	Cricetulus_griseus_chok1gshd
ENSCAFG00000001499	-	99	86.337	ENSCGRG00000017114	Zc3hc1	100	86.337	Cricetulus_griseus_crigri
ENSCAFG00000001499	-	95	42.942	ENSCSEG00000009284	zc3hc1	94	42.744	Cynoglossus_semilaevis
ENSCAFG00000001499	-	92	42.770	ENSCVAG00000011566	zc3hc1	94	42.566	Cyprinodon_variegatus
ENSCAFG00000001499	-	94	47.262	ENSDARG00000062651	zc3hc1	95	47.262	Danio_rerio
ENSCAFG00000001499	-	99	89.505	ENSDNOG00000045016	ZC3HC1	100	89.505	Dasypus_novemcinctus
ENSCAFG00000001499	-	99	79.208	ENSDORG00000008697	Zc3hc1	100	79.208	Dipodomys_ordii
ENSCAFG00000001499	-	89	92.308	ENSEASG00005008789	ZC3HC1	97	92.308	Equus_asinus_asinus
ENSCAFG00000001499	-	99	91.700	ENSECAG00000017886	ZC3HC1	100	91.700	Equus_caballus
ENSCAFG00000001499	-	83	82.099	ENSEEUG00000003123	ZC3HC1	84	82.099	Erinaceus_europaeus
ENSCAFG00000001499	-	92	43.600	ENSELUG00000023168	zc3hc1	98	43.738	Esox_lucius
ENSCAFG00000001499	-	99	93.267	ENSFCAG00000010429	ZC3HC1	100	93.267	Felis_catus
ENSCAFG00000001499	-	89	60.043	ENSFALG00000005006	ZC3HC1	100	60.043	Ficedula_albicollis
ENSCAFG00000001499	-	99	86.931	ENSFDAG00000019897	ZC3HC1	100	86.931	Fukomys_damarensis
ENSCAFG00000001499	-	94	42.800	ENSFHEG00000020149	zc3hc1	96	42.254	Fundulus_heteroclitus
ENSCAFG00000001499	-	92	41.822	ENSGMOG00000002914	zc3hc1	95	41.942	Gadus_morhua
ENSCAFG00000001499	-	98	61.584	ENSGALG00000008003	ZC3HC1	99	61.584	Gallus_gallus
ENSCAFG00000001499	-	94	43.888	ENSGAFG00000016095	zc3hc1	96	43.713	Gambusia_affinis
ENSCAFG00000001499	-	92	44.990	ENSGACG00000019706	zc3hc1	94	45.010	Gasterosteus_aculeatus
ENSCAFG00000001499	-	76	70.332	ENSGAGG00000016106	ZC3HC1	100	70.332	Gopherus_agassizii
ENSCAFG00000001499	-	98	92.659	ENSGGOG00000015504	ZC3HC1	99	92.659	Gorilla_gorilla
ENSCAFG00000001499	-	92	43.293	ENSHBUG00000008347	zc3hc1	94	43.089	Haplochromis_burtoni
ENSCAFG00000001499	-	99	88.317	ENSHGLG00000005085	ZC3HC1	100	88.317	Heterocephalus_glaber_female
ENSCAFG00000001499	-	99	88.119	ENSHGLG00100011395	ZC3HC1	100	88.119	Heterocephalus_glaber_male
ENSCAFG00000001499	-	93	42.916	ENSHCOG00000014309	zc3hc1	95	42.623	Hippocampus_comes
ENSCAFG00000001499	-	99	89.901	ENSSTOG00000023599	-	100	89.901	Ictidomys_tridecemlineatus
ENSCAFG00000001499	-	92	44.512	ENSKMAG00000015315	zc3hc1	88	44.106	Kryptolebias_marmoratus
ENSCAFG00000001499	-	93	44.246	ENSLBEG00000017325	zc3hc1	95	43.762	Labrus_bergylta
ENSCAFG00000001499	-	78	55.340	ENSLACG00000013032	ZC3HC1	97	53.883	Latimeria_chalumnae
ENSCAFG00000001499	-	98	51.373	ENSLOCG00000015963	zc3hc1	99	51.663	Lepisosteus_oculatus
ENSCAFG00000001499	-	99	89.152	ENSLAFG00000001292	ZC3HC1	100	89.152	Loxodonta_africana
ENSCAFG00000001499	-	99	92.871	ENSMFAG00000030176	ZC3HC1	100	92.871	Macaca_fascicularis
ENSCAFG00000001499	-	99	92.079	ENSMMUG00000006155	ZC3HC1	100	92.079	Macaca_mulatta
ENSCAFG00000001499	-	99	93.069	ENSMNEG00000011833	ZC3HC1	100	93.069	Macaca_nemestrina
ENSCAFG00000001499	-	99	92.871	ENSMLEG00000027328	ZC3HC1	100	92.871	Mandrillus_leucophaeus
ENSCAFG00000001499	-	94	44.689	ENSMAMG00000010691	zc3hc1	95	44.511	Mastacembelus_armatus
ENSCAFG00000001499	-	92	43.089	ENSMZEG00005007142	zc3hc1	94	42.886	Maylandia_zebra
ENSCAFG00000001499	-	98	60.938	ENSMGAG00000002977	ZC3HC1	99	61.523	Meleagris_gallopavo
ENSCAFG00000001499	-	80	82.169	ENSMAUG00000017032	Zc3hc1	92	82.169	Mesocricetus_auratus
ENSCAFG00000001499	-	99	90.891	ENSMICG00000009167	ZC3HC1	100	90.891	Microcebus_murinus
ENSCAFG00000001499	-	99	86.733	ENSMOCG00000015239	Zc3hc1	100	86.733	Microtus_ochrogaster
ENSCAFG00000001499	-	84	43.392	ENSMMOG00000002204	zc3hc1	99	43.137	Mola_mola
ENSCAFG00000001499	-	99	64.054	ENSMODG00000014630	ZC3HC1	100	64.054	Monodelphis_domestica
ENSCAFG00000001499	-	93	43.408	ENSMALG00000014447	zc3hc1	95	43.936	Monopterus_albus
ENSCAFG00000001499	-	99	86.733	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	86.733	Mus_caroli
ENSCAFG00000001499	-	99	86.139	ENSMUSG00000039130	Zc3hc1	100	86.139	Mus_musculus
ENSCAFG00000001499	-	99	80.198	MGP_PahariEiJ_G0021941	Zc3hc1	100	80.198	Mus_pahari
ENSCAFG00000001499	-	99	86.139	MGP_SPRETEiJ_G0029183	Zc3hc1	100	86.139	Mus_spretus
ENSCAFG00000001499	-	94	93.568	ENSMPUG00000005297	ZC3HC1	95	93.568	Mustela_putorius_furo
ENSCAFG00000001499	-	66	85.714	ENSMLUG00000029228	-	99	85.714	Myotis_lucifugus
ENSCAFG00000001499	-	99	91.107	ENSMLUG00000000063	-	100	91.107	Myotis_lucifugus
ENSCAFG00000001499	-	99	87.549	ENSNGAG00000019014	Zc3hc1	100	87.549	Nannospalax_galili
ENSCAFG00000001499	-	92	43.177	ENSNBRG00000004577	zc3hc1	94	42.974	Neolamprologus_brichardi
ENSCAFG00000001499	-	98	91.270	ENSNLEG00000012698	ZC3HC1	99	91.270	Nomascus_leucogenys
ENSCAFG00000001499	-	99	77.822	ENSMEUG00000011023	ZC3HC1	100	77.822	Notamacropus_eugenii
ENSCAFG00000001499	-	64	80.843	ENSOPRG00000007867	-	67	80.843	Ochotona_princeps
ENSCAFG00000001499	-	99	84.554	ENSODEG00000014604	ZC3HC1	100	84.680	Octodon_degus
ENSCAFG00000001499	-	92	43.496	ENSONIG00000011644	zc3hc1	94	43.293	Oreochromis_niloticus
ENSCAFG00000001499	-	89	68.602	ENSOANG00000011460	ZC3HC1	100	68.602	Ornithorhynchus_anatinus
ENSCAFG00000001499	-	99	85.941	ENSOCUG00000017137	ZC3HC1	100	85.941	Oryctolagus_cuniculus
ENSCAFG00000001499	-	94	43.434	ENSORLG00000014409	zc3hc1	94	43.434	Oryzias_latipes
ENSCAFG00000001499	-	94	43.232	ENSORLG00020015874	zc3hc1	94	43.232	Oryzias_latipes_hni
ENSCAFG00000001499	-	94	42.828	ENSORLG00015014641	zc3hc1	94	42.828	Oryzias_latipes_hsok
ENSCAFG00000001499	-	94	44.948	ENSOMEG00000020604	zc3hc1	95	44.898	Oryzias_melastigma
ENSCAFG00000001499	-	94	44.948	ENSOMEG00000000215	zc3hc1	95	44.898	Oryzias_melastigma
ENSCAFG00000001499	-	99	85.347	ENSOGAG00000026193	ZC3HC1	100	85.347	Otolemur_garnettii
ENSCAFG00000001499	-	100	91.406	ENSOARG00000004907	ZC3HC1	100	91.406	Ovis_aries
ENSCAFG00000001499	-	98	92.857	ENSPPAG00000043172	ZC3HC1	99	92.857	Pan_paniscus
ENSCAFG00000001499	-	99	92.673	ENSPPRG00000001004	ZC3HC1	100	92.673	Panthera_pardus
ENSCAFG00000001499	-	99	93.267	ENSPTIG00000007823	ZC3HC1	100	93.267	Panthera_tigris_altaica
ENSCAFG00000001499	-	98	92.460	ENSPTRG00000019685	ZC3HC1	99	92.460	Pan_troglodytes
ENSCAFG00000001499	-	99	91.683	ENSPANG00000014229	ZC3HC1	100	91.683	Papio_anubis
ENSCAFG00000001499	-	93	48.140	ENSPKIG00000007172	zc3hc1	95	48.454	Paramormyrops_kingsleyae
ENSCAFG00000001499	-	94	62.322	ENSPSIG00000016646	ZC3HC1	100	60.853	Pelodiscus_sinensis
ENSCAFG00000001499	-	93	41.449	ENSPMGG00000003548	zc3hc1	95	41.851	Periophthalmus_magnuspinnatus
ENSCAFG00000001499	-	99	87.525	ENSPEMG00000000514	Zc3hc1	100	87.525	Peromyscus_maniculatus_bairdii
ENSCAFG00000001499	-	98	75.397	ENSPCIG00000020619	ZC3HC1	100	79.177	Phascolarctos_cinereus
ENSCAFG00000001499	-	94	43.687	ENSPFOG00000003466	zc3hc1	96	43.513	Poecilia_formosa
ENSCAFG00000001499	-	94	43.287	ENSPLAG00000022211	zc3hc1	96	43.114	Poecilia_latipinna
ENSCAFG00000001499	-	94	43.687	ENSPMEG00000001458	zc3hc1	96	43.513	Poecilia_mexicana
ENSCAFG00000001499	-	94	43.487	ENSPREG00000004004	zc3hc1	96	43.313	Poecilia_reticulata
ENSCAFG00000001499	-	98	84.783	ENSPPYG00000017998	ZC3HC1	99	84.783	Pongo_abelii
ENSCAFG00000001499	-	90	84.665	ENSPCAG00000001182	ZC3HC1	100	84.665	Procavia_capensis
ENSCAFG00000001499	-	99	91.881	ENSPCOG00000017354	ZC3HC1	100	91.881	Propithecus_coquereli
ENSCAFG00000001499	-	99	84.752	ENSPVAG00000003195	ZC3HC1	100	84.752	Pteropus_vampyrus
ENSCAFG00000001499	-	92	43.089	ENSPNYG00000020692	zc3hc1	94	42.886	Pundamilia_nyererei
ENSCAFG00000001499	-	92	44.468	ENSPNAG00000020746	zc3hc1	95	44.050	Pygocentrus_nattereri
ENSCAFG00000001499	-	99	86.337	ENSRNOG00000010154	Zc3hc1	100	86.337	Rattus_norvegicus
ENSCAFG00000001499	-	89	92.763	ENSRBIG00000029409	ZC3HC1	100	92.763	Rhinopithecus_bieti
ENSCAFG00000001499	-	99	92.475	ENSRROG00000041831	ZC3HC1	100	92.475	Rhinopithecus_roxellana
ENSCAFG00000001499	-	87	89.508	ENSSBOG00000032787	ZC3HC1	100	89.508	Saimiri_boliviensis_boliviensis
ENSCAFG00000001499	-	91	78.970	ENSSHAG00000002529	ZC3HC1	100	78.970	Sarcophilus_harrisii
ENSCAFG00000001499	-	93	48.984	ENSSFOG00015003667	zc3hc1	91	47.764	Scleropages_formosus
ENSCAFG00000001499	-	94	43.976	ENSSMAG00000000647	zc3hc1	86	44.578	Scophthalmus_maximus
ENSCAFG00000001499	-	93	45.344	ENSSDUG00000004241	zc3hc1	93	45.161	Seriola_dumerili
ENSCAFG00000001499	-	93	45.142	ENSSLDG00000025056	zc3hc1	93	44.960	Seriola_lalandi_dorsalis
ENSCAFG00000001499	-	98	80.357	ENSSARG00000012013	ZC3HC1	99	80.357	Sorex_araneus
ENSCAFG00000001499	-	85	58.050	ENSSPUG00000000778	ZC3HC1	86	58.050	Sphenodon_punctatus
ENSCAFG00000001499	-	93	45.565	ENSSPAG00000020041	zc3hc1	95	45.382	Stegastes_partitus
ENSCAFG00000001499	-	99	90.297	ENSSSCG00000016565	ZC3HC1	100	90.488	Sus_scrofa
ENSCAFG00000001499	-	93	42.222	ENSTRUG00000020077	zc3hc1	95	42.020	Takifugu_rubripes
ENSCAFG00000001499	-	93	42.623	ENSTNIG00000007585	zc3hc1	99	42.653	Tetraodon_nigroviridis
ENSCAFG00000001499	-	88	90.698	ENSTBEG00000005216	ZC3HC1	90	90.698	Tupaia_belangeri
ENSCAFG00000001499	-	94	91.097	ENSTTRG00000008458	ZC3HC1	100	91.097	Tursiops_truncatus
ENSCAFG00000001499	-	99	94.059	ENSUAMG00000020249	ZC3HC1	100	94.059	Ursus_americanus
ENSCAFG00000001499	-	99	93.663	ENSUMAG00000009268	ZC3HC1	100	93.663	Ursus_maritimus
ENSCAFG00000001499	-	77	94.000	ENSVPAG00000010846	ZC3HC1	77	94.000	Vicugna_pacos
ENSCAFG00000001499	-	94	98.965	ENSVVUG00000012386	ZC3HC1	99	98.965	Vulpes_vulpes
ENSCAFG00000001499	-	90	52.790	ENSXETG00000033900	zc3hc1	95	52.790	Xenopus_tropicalis
ENSCAFG00000001499	-	94	43.373	ENSXCOG00000013570	zc3hc1	96	43.200	Xiphophorus_couchianus
ENSCAFG00000001499	-	87	45.022	ENSXMAG00000010979	zc3hc1	95	44.828	Xiphophorus_maculatus