EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000001536 (Gene tree)
Gene ID: 475122
Gene Symbol: SHARPIN
Alias: -
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 275116 bases
Position: chr13:37590392-37865507
Accession: 49813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000002217	zf-RanBP	PF00641.18	2.2e-06	1	1
ENSCAFP00000038652	zf-RanBP	PF00641.18	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000045304	-	534	-	ENSCAFP00000036479	178 (aa)	-	J9NTJ4
ENSCAFT00000002395	-	1107	-	ENSCAFP00000002217	369 (aa)	-	F1PEJ4
ENSCAFT00000050000	-	5632	XM_005628075	ENSCAFP00000038652	398 (aa)	XP_532352	J9NZD2

Gene Model

Click here to download ENSCAFG00000001536's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04217	Necroptosis	KEGG
cfa04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000001536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000001536	SHARPIN	95	76.880	ENSG00000179526	SHARPIN	100	80.000	Homo_sapiens
ENSCAFG00000001536	SHARPIN	100	85.714	ENSAMEG00000006042	SHARPIN	100	86.685	Ailuropoda_melanoleuca
ENSCAFG00000001536	SHARPIN	70	43.561	ENSACAG00000007245	-	54	39.130	Anolis_carolinensis
ENSCAFG00000001536	SHARPIN	99	76.800	ENSCCAG00000036190	SHARPIN	100	75.648	Cebus_capucinus
ENSCAFG00000001536	SHARPIN	89	65.875	ENSDORG00000008469	Sharpin	100	66.469	Dipodomys_ordii
ENSCAFG00000001536	SHARPIN	100	80.366	ENSECAG00000002550	-	100	80.387	Equus_caballus
ENSCAFG00000001536	SHARPIN	100	80.628	ENSECAG00000001400	SHARPIN	98	80.916	Equus_caballus
ENSCAFG00000001536	SHARPIN	95	85.269	ENSFCAG00000011548	SHARPIN	100	84.085	Felis_catus
ENSCAFG00000001536	SHARPIN	94	38.035	ENSGALG00000048524	SHARPIN	84	37.410	Gallus_gallus
ENSCAFG00000001536	SHARPIN	83	75.079	ENSGGOG00000027471	SHARPIN	96	75.394	Gorilla_gorilla
ENSCAFG00000001536	SHARPIN	95	84.703	ENSPPRG00000015953	SHARPIN	100	83.554	Panthera_pardus
ENSCAFG00000001536	SHARPIN	83	84.566	ENSPTIG00000016864	SHARPIN	81	85.714	Panthera_tigris_altaica
ENSCAFG00000001536	SHARPIN	64	42.160	ENSSPUG00000017933	SHARPIN	70	46.988	Sphenodon_punctatus
ENSCAFG00000001536	SHARPIN	98	80.274	ENSSSCG00000005914	SHARPIN	99	77.340	Sus_scrofa
ENSCAFG00000001536	SHARPIN	67	91.165	ENSUMAG00000020808	SHARPIN	88	81.818	Ursus_maritimus