EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000002013 (Gene tree)
Gene ID: 476335
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 160444 bases
Position: chr1:90723854-90884297
Accession: 46529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000002979	ResIII	PF04851.15	1.8e-08	1	1
ENSCAFP00000040971	ResIII	PF04851.15	1.9e-08	1	1
ENSCAFP00000002979	BRK	PF07533.16	2.1e-17	1	1
ENSCAFP00000040971	BRK	PF07533.16	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000003206	-	5632	XM_005615905	ENSCAFP00000002979	1556 (aa)	XP_005615962	E2RKP4
ENSCAFT00000046362	-	4722	XM_005615902	ENSCAFP00000040971	1574 (aa)	XP_005615959	J9P5P2

Gene Model

Click here to download ENSCAFG00000002013's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04714	Thermogenesis	KEGG
cfa05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000002013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000002013	SMARCA2	96	76.291	ENSCAFG00000017584	SMARCA4	98	76.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000002013	SMARCA2	100	97.774	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSCAFG00000002013	SMARCA2	100	80.214	ENSAPOG00000002641	SMARCA2	97	81.416	Acanthochromis_polyacanthus
ENSCAFG00000002013	SMARCA2	81	99.687	ENSAMEG00000012325	SMARCA2	100	99.687	Ailuropoda_melanoleuca
ENSCAFG00000002013	SMARCA2	100	80.557	ENSACIG00000015607	SMARCA2	97	80.702	Amphilophus_citrinellus
ENSCAFG00000002013	SMARCA2	100	80.050	ENSAOCG00000009647	-	97	80.949	Amphiprion_ocellaris
ENSCAFG00000002013	SMARCA2	100	80.339	ENSAPEG00000007646	SMARCA2	97	80.219	Amphiprion_percula
ENSCAFG00000002013	SMARCA2	99	80.943	ENSATEG00000006916	SMARCA2	96	81.060	Anabas_testudineus
ENSCAFG00000002013	SMARCA2	89	90.375	ENSAPLG00000013873	SMARCA2	94	89.595	Anas_platyrhynchos
ENSCAFG00000002013	SMARCA2	100	91.171	ENSACAG00000002423	SMARCA2	100	90.659	Anolis_carolinensis
ENSCAFG00000002013	SMARCA2	100	97.837	ENSANAG00000026498	SMARCA2	100	97.837	Aotus_nancymaae
ENSCAFG00000002013	SMARCA2	100	81.940	ENSACLG00000004248	SMARCA2	97	82.318	Astatotilapia_calliptera
ENSCAFG00000002013	SMARCA2	100	82.382	ENSAMXG00000012404	smarca2	97	83.051	Astyanax_mexicanus
ENSCAFG00000002013	SMARCA2	100	98.650	ENSBTAG00000007494	SMARCA2	100	98.650	Bos_taurus
ENSCAFG00000002013	SMARCA2	99	97.889	ENSCJAG00000010710	SMARCA2	100	96.623	Callithrix_jacchus
ENSCAFG00000002013	SMARCA2	78	95.070	ENSCAFG00020026802	SMARCA2	98	95.070	Canis_lupus_dingo
ENSCAFG00000002013	SMARCA2	100	98.650	ENSCHIG00000025863	SMARCA2	100	98.650	Capra_hircus
ENSCAFG00000002013	SMARCA2	100	96.805	ENSTSYG00000003858	SMARCA2	100	96.822	Carlito_syrichta
ENSCAFG00000002013	SMARCA2	99	93.088	ENSCAPG00000002890	SMARCA2	100	92.708	Cavia_aperea
ENSCAFG00000002013	SMARCA2	100	96.752	ENSCPOG00000005475	SMARCA2	100	96.752	Cavia_porcellus
ENSCAFG00000002013	SMARCA2	100	97.902	ENSCCAG00000030636	SMARCA2	100	97.902	Cebus_capucinus
ENSCAFG00000002013	SMARCA2	100	97.833	ENSCATG00000031470	SMARCA2	100	97.833	Cercocebus_atys
ENSCAFG00000002013	SMARCA2	100	96.508	ENSCLAG00000014484	SMARCA2	100	96.317	Chinchilla_lanigera
ENSCAFG00000002013	SMARCA2	93	98.089	ENSCSAG00000008650	SMARCA2	99	98.089	Chlorocebus_sabaeus
ENSCAFG00000002013	SMARCA2	87	94.618	ENSCHOG00000004316	SMARCA2	87	94.618	Choloepus_hoffmanni
ENSCAFG00000002013	SMARCA2	97	95.267	ENSCPBG00000025463	SMARCA2	100	91.515	Chrysemys_picta_bellii
ENSCAFG00000002013	SMARCA2	100	98.277	ENSCANG00000039597	SMARCA2	100	98.277	Colobus_angolensis_palliatus
ENSCAFG00000002013	SMARCA2	100	88.931	ENSCGRG00001002323	Smarca2	100	88.777	Cricetulus_griseus_chok1gshd
ENSCAFG00000002013	SMARCA2	99	78.050	ENSCSEG00000019311	SMARCA2	97	77.938	Cynoglossus_semilaevis
ENSCAFG00000002013	SMARCA2	84	79.241	ENSCVAG00000016571	SMARCA2	95	79.892	Cyprinodon_variegatus
ENSCAFG00000002013	SMARCA2	100	82.491	ENSDARG00000008904	smarca2	97	82.521	Danio_rerio
ENSCAFG00000002013	SMARCA2	100	97.212	ENSDNOG00000006402	SMARCA2	100	97.212	Dasypus_novemcinctus
ENSCAFG00000002013	SMARCA2	100	97.008	ENSDORG00000014832	Smarca2	100	97.008	Dipodomys_ordii
ENSCAFG00000002013	SMARCA2	81	60.325	FBgn0000212	brm	90	55.202	Drosophila_melanogaster
ENSCAFG00000002013	SMARCA2	94	71.765	ENSEBUG00000011442	-	94	71.074	Eptatretus_burgeri
ENSCAFG00000002013	SMARCA2	86	62.995	ENSEBUG00000002449	-	95	64.322	Eptatretus_burgeri
ENSCAFG00000002013	SMARCA2	100	99.037	ENSEASG00005010312	SMARCA2	100	99.037	Equus_asinus_asinus
ENSCAFG00000002013	SMARCA2	67	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSCAFG00000002013	SMARCA2	92	81.144	ENSELUG00000010318	smarca2	96	79.528	Esox_lucius
ENSCAFG00000002013	SMARCA2	100	99.238	ENSFCAG00000001568	SMARCA2	100	99.238	Felis_catus
ENSCAFG00000002013	SMARCA2	100	92.303	ENSFALG00000010416	SMARCA2	100	92.877	Ficedula_albicollis
ENSCAFG00000002013	SMARCA2	99	95.501	ENSFDAG00000010502	SMARCA2	99	95.481	Fukomys_damarensis
ENSCAFG00000002013	SMARCA2	100	81.084	ENSFHEG00000021250	SMARCA2	97	80.724	Fundulus_heteroclitus
ENSCAFG00000002013	SMARCA2	98	77.835	ENSGMOG00000014229	SMARCA2	97	79.263	Gadus_morhua
ENSCAFG00000002013	SMARCA2	100	93.130	ENSGALG00000010164	SMARCA2	100	92.366	Gallus_gallus
ENSCAFG00000002013	SMARCA2	95	76.197	ENSGAFG00000001164	SMARCA2	89	96.667	Gambusia_affinis
ENSCAFG00000002013	SMARCA2	99	79.694	ENSGACG00000014488	SMARCA2	97	78.988	Gasterosteus_aculeatus
ENSCAFG00000002013	SMARCA2	100	92.239	ENSGAGG00000024412	SMARCA2	100	92.048	Gopherus_agassizii
ENSCAFG00000002013	SMARCA2	100	93.430	ENSGGOG00000000513	SMARCA2	100	93.620	Gorilla_gorilla
ENSCAFG00000002013	SMARCA2	99	81.965	ENSHBUG00000006691	SMARCA2	96	82.291	Haplochromis_burtoni
ENSCAFG00000002013	SMARCA2	99	95.478	ENSHGLG00000005215	SMARCA2	99	95.437	Heterocephalus_glaber_female
ENSCAFG00000002013	SMARCA2	100	96.917	ENSHGLG00100010496	SMARCA2	100	96.917	Heterocephalus_glaber_male
ENSCAFG00000002013	SMARCA2	89	75.934	ENSHCOG00000015348	-	88	86.337	Hippocampus_comes
ENSCAFG00000002013	SMARCA2	100	80.581	ENSIPUG00000011060	smarca2	97	81.584	Ictalurus_punctatus
ENSCAFG00000002013	SMARCA2	100	97.141	ENSSTOG00000006812	SMARCA2	100	97.141	Ictidomys_tridecemlineatus
ENSCAFG00000002013	SMARCA2	100	97.454	ENSJJAG00000010867	Smarca2	100	97.454	Jaculus_jaculus
ENSCAFG00000002013	SMARCA2	100	79.553	ENSKMAG00000015844	-	98	79.796	Kryptolebias_marmoratus
ENSCAFG00000002013	SMARCA2	98	83.877	ENSLOCG00000011499	smarca2	97	83.621	Lepisosteus_oculatus
ENSCAFG00000002013	SMARCA2	100	96.210	ENSLAFG00000014061	SMARCA2	100	96.210	Loxodonta_africana
ENSCAFG00000002013	SMARCA2	100	96.469	ENSMFAG00000003814	SMARCA2	100	96.469	Macaca_fascicularis
ENSCAFG00000002013	SMARCA2	100	98.214	ENSMMUG00000015279	SMARCA2	100	98.214	Macaca_mulatta
ENSCAFG00000002013	SMARCA2	100	97.580	ENSMNEG00000041069	SMARCA2	100	97.580	Macaca_nemestrina
ENSCAFG00000002013	SMARCA2	100	95.331	ENSMLEG00000027418	SMARCA2	100	95.331	Mandrillus_leucophaeus
ENSCAFG00000002013	SMARCA2	100	80.224	ENSMAMG00000003056	SMARCA2	97	81.952	Mastacembelus_armatus
ENSCAFG00000002013	SMARCA2	99	82.124	ENSMZEG00005020709	SMARCA2	96	82.454	Maylandia_zebra
ENSCAFG00000002013	SMARCA2	76	77.689	ENSMGAG00000005160	-	100	77.025	Meleagris_gallopavo
ENSCAFG00000002013	SMARCA2	100	98.275	ENSMICG00000005162	SMARCA2	100	98.275	Microcebus_murinus
ENSCAFG00000002013	SMARCA2	100	96.438	ENSMOCG00000001611	Smarca2	100	96.438	Microtus_ochrogaster
ENSCAFG00000002013	SMARCA2	99	78.815	ENSMMOG00000014196	SMARCA2	97	77.966	Mola_mola
ENSCAFG00000002013	SMARCA2	100	93.648	ENSMODG00000003578	SMARCA2	100	93.396	Monodelphis_domestica
ENSCAFG00000002013	SMARCA2	99	81.647	ENSMALG00000009611	SMARCA2	97	81.374	Monopterus_albus
ENSCAFG00000002013	SMARCA2	100	95.770	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.794	Mus_caroli
ENSCAFG00000002013	SMARCA2	100	95.704	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSCAFG00000002013	SMARCA2	100	95.947	MGP_PahariEiJ_G0014334	Smarca2	100	95.947	Mus_pahari
ENSCAFG00000002013	SMARCA2	100	95.518	MGP_SPRETEiJ_G0023759	Smarca2	100	95.518	Mus_spretus
ENSCAFG00000002013	SMARCA2	81	99.610	ENSMPUG00000005171	SMARCA2	94	99.610	Mustela_putorius_furo
ENSCAFG00000002013	SMARCA2	99	91.703	ENSMLUG00000002342	SMARCA2	99	91.567	Myotis_lucifugus
ENSCAFG00000002013	SMARCA2	99	95.947	ENSNGAG00000000108	Smarca2	99	95.947	Nannospalax_galili
ENSCAFG00000002013	SMARCA2	95	68.679	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSCAFG00000002013	SMARCA2	100	95.083	ENSNLEG00000008575	SMARCA2	100	95.083	Nomascus_leucogenys
ENSCAFG00000002013	SMARCA2	100	86.912	ENSMEUG00000009812	SMARCA2	100	86.658	Notamacropus_eugenii
ENSCAFG00000002013	SMARCA2	100	90.938	ENSOPRG00000013474	SMARCA2	100	90.875	Ochotona_princeps
ENSCAFG00000002013	SMARCA2	99	94.981	ENSODEG00000005452	SMARCA2	99	95.409	Octodon_degus
ENSCAFG00000002013	SMARCA2	99	80.391	ENSONIG00000014163	SMARCA2	97	80.077	Oreochromis_niloticus
ENSCAFG00000002013	SMARCA2	50	94.352	ENSOANG00000008299	-	95	98.113	Ornithorhynchus_anatinus
ENSCAFG00000002013	SMARCA2	100	96.897	ENSOCUG00000006320	SMARCA2	100	96.897	Oryctolagus_cuniculus
ENSCAFG00000002013	SMARCA2	100	79.386	ENSORLG00000020820	SMARCA2	100	79.375	Oryzias_latipes
ENSCAFG00000002013	SMARCA2	100	79.498	ENSORLG00015006289	SMARCA2	100	79.188	Oryzias_latipes_hsok
ENSCAFG00000002013	SMARCA2	99	81.400	ENSOMEG00000009736	-	97	80.799	Oryzias_melastigma
ENSCAFG00000002013	SMARCA2	99	94.922	ENSOGAG00000017053	SMARCA2	99	94.922	Otolemur_garnettii
ENSCAFG00000002013	SMARCA2	100	96.985	ENSOARG00000013265	SMARCA2	100	96.985	Ovis_aries
ENSCAFG00000002013	SMARCA2	100	93.359	ENSPPAG00000038717	SMARCA2	100	94.859	Pan_paniscus
ENSCAFG00000002013	SMARCA2	100	99.365	ENSPPRG00000001879	SMARCA2	100	99.365	Panthera_pardus
ENSCAFG00000002013	SMARCA2	100	96.696	ENSPTRG00000051168	SMARCA2	100	96.696	Pan_troglodytes
ENSCAFG00000002013	SMARCA2	100	90.818	ENSPANG00000025121	SMARCA2	100	90.829	Papio_anubis
ENSCAFG00000002013	SMARCA2	100	83.761	ENSPKIG00000018469	-	100	83.430	Paramormyrops_kingsleyae
ENSCAFG00000002013	SMARCA2	100	91.810	ENSPSIG00000006284	SMARCA2	100	90.966	Pelodiscus_sinensis
ENSCAFG00000002013	SMARCA2	98	75.372	ENSPMGG00000013696	-	97	75.393	Periophthalmus_magnuspinnatus
ENSCAFG00000002013	SMARCA2	100	96.043	ENSPEMG00000019821	Smarca2	100	96.043	Peromyscus_maniculatus_bairdii
ENSCAFG00000002013	SMARCA2	94	73.248	ENSPMAG00000005337	-	94	72.614	Petromyzon_marinus
ENSCAFG00000002013	SMARCA2	100	95.501	ENSPCIG00000015658	SMARCA2	100	95.501	Phascolarctos_cinereus
ENSCAFG00000002013	SMARCA2	100	79.875	ENSPFOG00000001856	SMARCA2	97	79.286	Poecilia_formosa
ENSCAFG00000002013	SMARCA2	99	79.710	ENSPLAG00000017829	SMARCA2	96	77.872	Poecilia_latipinna
ENSCAFG00000002013	SMARCA2	99	79.760	ENSPMEG00000001815	-	97	76.834	Poecilia_mexicana
ENSCAFG00000002013	SMARCA2	100	79.379	ENSPREG00000013800	SMARCA2	96	77.642	Poecilia_reticulata
ENSCAFG00000002013	SMARCA2	100	97.640	ENSPPYG00000019258	SMARCA2	100	97.640	Pongo_abelii
ENSCAFG00000002013	SMARCA2	79	86.486	ENSPCAG00000016969	SMARCA2	78	86.486	Procavia_capensis
ENSCAFG00000002013	SMARCA2	100	96.171	ENSPCOG00000025709	SMARCA2	100	96.171	Propithecus_coquereli
ENSCAFG00000002013	SMARCA2	91	99.474	ENSPVAG00000000901	SMARCA2	95	99.474	Pteropus_vampyrus
ENSCAFG00000002013	SMARCA2	100	78.129	ENSPNYG00000004533	SMARCA2	97	77.951	Pundamilia_nyererei
ENSCAFG00000002013	SMARCA2	99	83.685	ENSPNAG00000014635	smarca2	99	83.598	Pygocentrus_nattereri
ENSCAFG00000002013	SMARCA2	100	95.742	ENSRNOG00000011931	Smarca2	100	95.742	Rattus_norvegicus
ENSCAFG00000002013	SMARCA2	100	95.788	ENSRBIG00000038618	SMARCA2	100	95.788	Rhinopithecus_bieti
ENSCAFG00000002013	SMARCA2	100	97.035	ENSRROG00000019271	SMARCA2	100	97.035	Rhinopithecus_roxellana
ENSCAFG00000002013	SMARCA2	100	95.362	ENSSBOG00000034827	SMARCA2	100	95.362	Saimiri_boliviensis_boliviensis
ENSCAFG00000002013	SMARCA2	100	92.893	ENSSHAG00000007884	SMARCA2	100	92.516	Sarcophilus_harrisii
ENSCAFG00000002013	SMARCA2	91	84.986	ENSSFOG00015014870	SMARCA2	97	86.354	Scleropages_formosus
ENSCAFG00000002013	SMARCA2	100	81.115	ENSSMAG00000013707	SMARCA2	97	81.209	Scophthalmus_maximus
ENSCAFG00000002013	SMARCA2	99	80.848	ENSSDUG00000008852	-	98	78.947	Seriola_dumerili
ENSCAFG00000002013	SMARCA2	99	79.569	ENSSLDG00000025449	SMARCA2	96	79.805	Seriola_lalandi_dorsalis
ENSCAFG00000002013	SMARCA2	95	98.276	ENSSARG00000007888	SMARCA2	95	97.895	Sorex_araneus
ENSCAFG00000002013	SMARCA2	95	87.426	ENSSPUG00000001629	SMARCA2	98	87.401	Sphenodon_punctatus
ENSCAFG00000002013	SMARCA2	100	80.263	ENSSPAG00000020091	-	97	80.141	Stegastes_partitus
ENSCAFG00000002013	SMARCA2	100	98.650	ENSSSCG00000005232	SMARCA2	100	98.650	Sus_scrofa
ENSCAFG00000002013	SMARCA2	100	90.967	ENSTGUG00000005460	SMARCA2	100	90.903	Taeniopygia_guttata
ENSCAFG00000002013	SMARCA2	99	79.202	ENSTRUG00000015619	SMARCA2	97	79.782	Takifugu_rubripes
ENSCAFG00000002013	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSCAFG00000002013	SMARCA2	100	94.857	ENSTTRG00000002033	SMARCA2	100	94.857	Tursiops_truncatus
ENSCAFG00000002013	SMARCA2	89	97.325	ENSUAMG00000024701	SMARCA2	99	97.327	Ursus_americanus
ENSCAFG00000002013	SMARCA2	91	88.781	ENSVPAG00000001204	SMARCA2	100	88.781	Vicugna_pacos
ENSCAFG00000002013	SMARCA2	77	96.080	ENSVVUG00000004598	SMARCA2	99	96.080	Vulpes_vulpes
ENSCAFG00000002013	SMARCA2	100	83.261	ENSXETG00000015299	smarca2	100	83.106	Xenopus_tropicalis
ENSCAFG00000002013	SMARCA2	89	79.252	ENSXCOG00000011073	SMARCA2	97	79.103	Xiphophorus_couchianus
ENSCAFG00000002013	SMARCA2	100	79.293	ENSXMAG00000015611	SMARCA2	95	78.604	Xiphophorus_maculatus