EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000002091 (Gene tree)
Gene ID: 484183
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 60299 bases
Position: chr1:93144081-93204379
Accession: 45444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000003072	RTC	PF01137.21	2.5e-60	1	1
ENSCAFP00000003072	RTC_insert	PF05189.13	1.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000003309	-	2136	XM_541299	ENSCAFP00000003072	373 (aa)	XP_541299	E2RAG1

Gene Model

Click here to download ENSCAFG00000002091's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000002091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000002091	RCL1	100	96.515	ENSG00000120158	RCL1	100	97.209	Homo_sapiens
ENSCAFG00000002091	RCL1	100	80.214	ENSAPOG00000015666	rcl1	100	80.214	Acanthochromis_polyacanthus
ENSCAFG00000002091	RCL1	100	97.855	ENSAMEG00000002631	RCL1	100	97.855	Ailuropoda_melanoleuca
ENSCAFG00000002091	RCL1	99	80.000	ENSACIG00000021195	rcl1	99	80.000	Amphilophus_citrinellus
ENSCAFG00000002091	RCL1	100	79.412	ENSAOCG00000002223	rcl1	100	79.412	Amphiprion_ocellaris
ENSCAFG00000002091	RCL1	100	79.679	ENSAPEG00000006905	rcl1	100	79.679	Amphiprion_percula
ENSCAFG00000002091	RCL1	99	77.568	ENSATEG00000020026	rcl1	99	77.568	Anabas_testudineus
ENSCAFG00000002091	RCL1	88	86.890	ENSAPLG00000006031	RCL1	100	86.890	Anas_platyrhynchos
ENSCAFG00000002091	RCL1	100	85.255	ENSACAG00000003640	RCL1	100	85.255	Anolis_carolinensis
ENSCAFG00000002091	RCL1	100	95.710	ENSANAG00000037372	RCL1	100	95.710	Aotus_nancymaae
ENSCAFG00000002091	RCL1	99	79.730	ENSACLG00000021724	rcl1	99	79.730	Astatotilapia_calliptera
ENSCAFG00000002091	RCL1	98	79.891	ENSAMXG00000033394	rcl1	99	79.891	Astyanax_mexicanus
ENSCAFG00000002091	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSCAFG00000002091	RCL1	100	96.247	ENSCJAG00000011202	RCL1	100	96.247	Callithrix_jacchus
ENSCAFG00000002091	RCL1	100	99.464	ENSCAFG00020000638	RCL1	78	99.464	Canis_lupus_dingo
ENSCAFG00000002091	RCL1	100	96.247	ENSCHIG00000012407	RCL1	100	96.247	Capra_hircus
ENSCAFG00000002091	RCL1	88	97.248	ENSTSYG00000009592	RCL1	97	97.790	Carlito_syrichta
ENSCAFG00000002091	RCL1	68	79.191	ENSCAPG00000013575	RCL1	100	79.191	Cavia_aperea
ENSCAFG00000002091	RCL1	100	95.442	ENSCPOG00000015354	RCL1	100	95.442	Cavia_porcellus
ENSCAFG00000002091	RCL1	100	96.247	ENSCCAG00000033505	RCL1	100	96.247	Cebus_capucinus
ENSCAFG00000002091	RCL1	100	95.710	ENSCATG00000034721	RCL1	100	95.710	Cercocebus_atys
ENSCAFG00000002091	RCL1	100	95.710	ENSCLAG00000007445	RCL1	100	95.710	Chinchilla_lanigera
ENSCAFG00000002091	RCL1	100	96.247	ENSCSAG00000008811	RCL1	100	96.247	Chlorocebus_sabaeus
ENSCAFG00000002091	RCL1	87	81.424	ENSCHOG00000007216	RCL1	100	81.424	Choloepus_hoffmanni
ENSCAFG00000002091	RCL1	100	89.544	ENSCPBG00000025481	RCL1	94	90.274	Chrysemys_picta_bellii
ENSCAFG00000002091	RCL1	98	58.919	ENSCING00000019565	-	98	58.919	Ciona_intestinalis
ENSCAFG00000002091	RCL1	100	96.247	ENSCANG00000027099	RCL1	100	96.247	Colobus_angolensis_palliatus
ENSCAFG00000002091	RCL1	100	96.247	ENSCGRG00001013748	Rcl1	100	96.247	Cricetulus_griseus_chok1gshd
ENSCAFG00000002091	RCL1	88	96.037	ENSCGRG00000005843	Rcl1	99	96.037	Cricetulus_griseus_crigri
ENSCAFG00000002091	RCL1	99	78.919	ENSCSEG00000000712	rcl1	97	78.919	Cynoglossus_semilaevis
ENSCAFG00000002091	RCL1	99	81.622	ENSCVAG00000011536	rcl1	99	81.622	Cyprinodon_variegatus
ENSCAFG00000002091	RCL1	98	77.657	ENSDARG00000038312	rcl1	100	77.657	Danio_rerio
ENSCAFG00000002091	RCL1	71	96.981	ENSDNOG00000019911	RCL1	100	96.981	Dasypus_novemcinctus
ENSCAFG00000002091	RCL1	100	95.174	ENSDORG00000015645	Rcl1	100	95.174	Dipodomys_ordii
ENSCAFG00000002091	RCL1	99	53.439	FBgn0020909	Rtc1	98	53.439	Drosophila_melanogaster
ENSCAFG00000002091	RCL1	72	95.652	ENSETEG00000014087	-	82	95.652	Echinops_telfairi
ENSCAFG00000002091	RCL1	100	54.667	ENSEBUG00000016621	-	100	54.667	Eptatretus_burgeri
ENSCAFG00000002091	RCL1	100	96.515	ENSEASG00005010653	RCL1	100	96.515	Equus_asinus_asinus
ENSCAFG00000002091	RCL1	100	96.515	ENSECAG00000015973	RCL1	100	96.515	Equus_caballus
ENSCAFG00000002091	RCL1	100	82.306	ENSEEUG00000009801	RCL1	100	82.306	Erinaceus_europaeus
ENSCAFG00000002091	RCL1	100	76.471	ENSELUG00000007353	rcl1	100	76.471	Esox_lucius
ENSCAFG00000002091	RCL1	100	96.515	ENSFCAG00000014557	RCL1	100	96.515	Felis_catus
ENSCAFG00000002091	RCL1	95	82.254	ENSFALG00000010553	RCL1	94	82.254	Ficedula_albicollis
ENSCAFG00000002091	RCL1	88	94.495	ENSFDAG00000004209	RCL1	100	94.495	Fukomys_damarensis
ENSCAFG00000002091	RCL1	99	80.811	ENSFHEG00000011228	rcl1	99	80.811	Fundulus_heteroclitus
ENSCAFG00000002091	RCL1	99	78.649	ENSGMOG00000004677	rcl1	99	78.919	Gadus_morhua
ENSCAFG00000002091	RCL1	99	86.179	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
ENSCAFG00000002091	RCL1	99	79.459	ENSGAFG00000007257	rcl1	99	79.459	Gambusia_affinis
ENSCAFG00000002091	RCL1	100	78.877	ENSGACG00000017474	rcl1	100	78.877	Gasterosteus_aculeatus
ENSCAFG00000002091	RCL1	100	89.544	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
ENSCAFG00000002091	RCL1	100	95.979	ENSGGOG00000015041	RCL1	100	95.979	Gorilla_gorilla
ENSCAFG00000002091	RCL1	99	80.000	ENSHBUG00000001393	rcl1	99	80.000	Haplochromis_burtoni
ENSCAFG00000002091	RCL1	100	79.088	ENSHGLG00000005368	-	100	78.552	Heterocephalus_glaber_female
ENSCAFG00000002091	RCL1	100	95.710	ENSHGLG00000016452	RCL1	100	95.710	Heterocephalus_glaber_female
ENSCAFG00000002091	RCL1	100	80.161	ENSHGLG00100018010	-	100	79.625	Heterocephalus_glaber_male
ENSCAFG00000002091	RCL1	100	89.008	ENSHGLG00100008718	-	100	89.008	Heterocephalus_glaber_male
ENSCAFG00000002091	RCL1	99	79.189	ENSHCOG00000020170	rcl1	99	79.189	Hippocampus_comes
ENSCAFG00000002091	RCL1	98	80.707	ENSIPUG00000018054	RCL1	99	80.707	Ictalurus_punctatus
ENSCAFG00000002091	RCL1	100	94.906	ENSSTOG00000000023	RCL1	100	94.906	Ictidomys_tridecemlineatus
ENSCAFG00000002091	RCL1	100	94.906	ENSJJAG00000022803	-	100	94.906	Jaculus_jaculus
ENSCAFG00000002091	RCL1	54	72.139	ENSJJAG00000000764	-	95	72.165	Jaculus_jaculus
ENSCAFG00000002091	RCL1	100	83.914	ENSJJAG00000015632	-	100	83.914	Jaculus_jaculus
ENSCAFG00000002091	RCL1	98	79.292	ENSKMAG00000011946	rcl1	99	79.292	Kryptolebias_marmoratus
ENSCAFG00000002091	RCL1	99	77.297	ENSLBEG00000003957	rcl1	99	77.297	Labrus_bergylta
ENSCAFG00000002091	RCL1	91	81.121	ENSLACG00000004594	RCL1	98	85.174	Latimeria_chalumnae
ENSCAFG00000002091	RCL1	100	82.038	ENSLOCG00000010148	rcl1	98	82.038	Lepisosteus_oculatus
ENSCAFG00000002091	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSCAFG00000002091	RCL1	100	96.247	ENSMFAG00000037906	RCL1	100	96.247	Macaca_fascicularis
ENSCAFG00000002091	RCL1	100	96.247	ENSMNEG00000012288	RCL1	100	96.247	Macaca_nemestrina
ENSCAFG00000002091	RCL1	100	96.247	ENSMLEG00000043088	RCL1	100	96.247	Mandrillus_leucophaeus
ENSCAFG00000002091	RCL1	99	80.270	ENSMAMG00000008311	rcl1	99	80.270	Mastacembelus_armatus
ENSCAFG00000002091	RCL1	99	79.730	ENSMZEG00005017292	rcl1	99	79.730	Maylandia_zebra
ENSCAFG00000002091	RCL1	58	84.932	ENSMGAG00000002245	RCL1	97	84.906	Meleagris_gallopavo
ENSCAFG00000002091	RCL1	58	96.744	ENSMAUG00000008922	Rcl1	100	96.744	Mesocricetus_auratus
ENSCAFG00000002091	RCL1	100	95.174	ENSMICG00000015562	RCL1	100	95.174	Microcebus_murinus
ENSCAFG00000002091	RCL1	100	95.979	ENSMOCG00000012145	Rcl1	100	95.979	Microtus_ochrogaster
ENSCAFG00000002091	RCL1	99	76.819	ENSMMOG00000021264	rcl1	99	76.819	Mola_mola
ENSCAFG00000002091	RCL1	95	93.239	ENSMODG00000015377	RCL1	94	93.239	Monodelphis_domestica
ENSCAFG00000002091	RCL1	99	78.649	ENSMALG00000018618	rcl1	99	78.649	Monopterus_albus
ENSCAFG00000002091	RCL1	100	95.979	MGP_CAROLIEiJ_G0022853	Rcl1	100	95.979	Mus_caroli
ENSCAFG00000002091	RCL1	100	95.442	ENSMUSG00000024785	Rcl1	100	95.442	Mus_musculus
ENSCAFG00000002091	RCL1	100	95.979	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSCAFG00000002091	RCL1	100	95.174	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSCAFG00000002091	RCL1	100	96.783	ENSMPUG00000004998	RCL1	100	96.783	Mustela_putorius_furo
ENSCAFG00000002091	RCL1	100	95.710	ENSMLUG00000009654	RCL1	100	95.710	Myotis_lucifugus
ENSCAFG00000002091	RCL1	100	95.442	ENSNGAG00000015327	Rcl1	100	95.442	Nannospalax_galili
ENSCAFG00000002091	RCL1	90	78.932	ENSNBRG00000019854	rcl1	96	75.419	Neolamprologus_brichardi
ENSCAFG00000002091	RCL1	100	93.298	ENSNLEG00000008891	RCL1	100	93.298	Nomascus_leucogenys
ENSCAFG00000002091	RCL1	100	87.668	ENSMEUG00000007653	RCL1	100	87.668	Notamacropus_eugenii
ENSCAFG00000002091	RCL1	100	94.102	ENSOPRG00000010965	RCL1	100	94.102	Ochotona_princeps
ENSCAFG00000002091	RCL1	88	78.614	ENSODEG00000004151	RCL1	96	79.573	Octodon_degus
ENSCAFG00000002091	RCL1	99	80.000	ENSONIG00000003871	rcl1	99	80.000	Oreochromis_niloticus
ENSCAFG00000002091	RCL1	67	87.747	ENSOANG00000013193	-	100	87.747	Ornithorhynchus_anatinus
ENSCAFG00000002091	RCL1	100	95.710	ENSOCUG00000008161	RCL1	100	95.710	Oryctolagus_cuniculus
ENSCAFG00000002091	RCL1	100	77.540	ENSORLG00000010443	rcl1	100	77.540	Oryzias_latipes
ENSCAFG00000002091	RCL1	100	77.540	ENSORLG00020012211	rcl1	100	77.540	Oryzias_latipes_hni
ENSCAFG00000002091	RCL1	100	77.273	ENSORLG00015001122	rcl1	100	77.273	Oryzias_latipes_hsok
ENSCAFG00000002091	RCL1	100	79.144	ENSOMEG00000022976	rcl1	88	79.144	Oryzias_melastigma
ENSCAFG00000002091	RCL1	100	94.370	ENSOGAG00000007480	RCL1	100	94.370	Otolemur_garnettii
ENSCAFG00000002091	RCL1	100	96.515	ENSOARG00000013463	RCL1	100	96.515	Ovis_aries
ENSCAFG00000002091	RCL1	100	96.247	ENSPPAG00000037958	RCL1	100	96.247	Pan_paniscus
ENSCAFG00000002091	RCL1	100	95.710	ENSPPRG00000022645	RCL1	100	95.710	Panthera_pardus
ENSCAFG00000002091	RCL1	87	96.626	ENSPTIG00000019031	RCL1	97	95.673	Panthera_tigris_altaica
ENSCAFG00000002091	RCL1	100	95.979	ENSPTRG00000020743	RCL1	100	95.979	Pan_troglodytes
ENSCAFG00000002091	RCL1	100	96.247	ENSPANG00000025151	RCL1	100	96.247	Papio_anubis
ENSCAFG00000002091	RCL1	100	79.679	ENSPKIG00000021022	rcl1	100	79.679	Paramormyrops_kingsleyae
ENSCAFG00000002091	RCL1	88	90.549	ENSPSIG00000012302	RCL1	100	90.549	Pelodiscus_sinensis
ENSCAFG00000002091	RCL1	100	77.540	ENSPMGG00000024007	rcl1	100	77.540	Periophthalmus_magnuspinnatus
ENSCAFG00000002091	RCL1	100	96.247	ENSPEMG00000023275	Rcl1	100	96.247	Peromyscus_maniculatus_bairdii
ENSCAFG00000002091	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSCAFG00000002091	RCL1	100	93.834	ENSPCIG00000000188	RCL1	100	93.834	Phascolarctos_cinereus
ENSCAFG00000002091	RCL1	99	80.270	ENSPFOG00000019682	rcl1	99	80.270	Poecilia_formosa
ENSCAFG00000002091	RCL1	99	80.270	ENSPLAG00000022354	rcl1	99	80.270	Poecilia_latipinna
ENSCAFG00000002091	RCL1	99	80.270	ENSPMEG00000008131	rcl1	99	80.270	Poecilia_mexicana
ENSCAFG00000002091	RCL1	99	79.730	ENSPREG00000008032	rcl1	99	79.730	Poecilia_reticulata
ENSCAFG00000002091	RCL1	100	96.247	ENSPPYG00000019244	RCL1	100	96.247	Pongo_abelii
ENSCAFG00000002091	RCL1	100	84.718	ENSPCAG00000001440	RCL1	100	84.718	Procavia_capensis
ENSCAFG00000002091	RCL1	100	95.979	ENSPCOG00000009611	RCL1	100	95.979	Propithecus_coquereli
ENSCAFG00000002091	RCL1	100	96.515	ENSPVAG00000015752	RCL1	100	96.515	Pteropus_vampyrus
ENSCAFG00000002091	RCL1	99	79.730	ENSPNYG00000012910	rcl1	99	79.730	Pundamilia_nyererei
ENSCAFG00000002091	RCL1	99	80.161	ENSPNAG00000028307	rcl1	92	80.161	Pygocentrus_nattereri
ENSCAFG00000002091	RCL1	100	95.174	ENSRNOG00000015491	Rcl1	100	95.174	Rattus_norvegicus
ENSCAFG00000002091	RCL1	100	95.979	ENSRBIG00000035818	RCL1	100	95.979	Rhinopithecus_bieti
ENSCAFG00000002091	RCL1	100	96.247	ENSRROG00000029781	RCL1	100	96.247	Rhinopithecus_roxellana
ENSCAFG00000002091	RCL1	98	36.216	YOL010W	-	97	36.216	Saccharomyces_cerevisiae
ENSCAFG00000002091	RCL1	100	95.979	ENSSBOG00000026369	RCL1	100	95.979	Saimiri_boliviensis_boliviensis
ENSCAFG00000002091	RCL1	88	93.333	ENSSHAG00000014086	RCL1	100	93.333	Sarcophilus_harrisii
ENSCAFG00000002091	RCL1	100	79.144	ENSSFOG00015023020	rcl1	100	79.144	Scleropages_formosus
ENSCAFG00000002091	RCL1	99	80.000	ENSSMAG00000019751	rcl1	85	80.000	Scophthalmus_maximus
ENSCAFG00000002091	RCL1	100	79.144	ENSSDUG00000006349	rcl1	100	79.144	Seriola_dumerili
ENSCAFG00000002091	RCL1	100	79.412	ENSSLDG00000022076	rcl1	100	79.412	Seriola_lalandi_dorsalis
ENSCAFG00000002091	RCL1	100	94.906	ENSSARG00000009260	RCL1	100	94.906	Sorex_araneus
ENSCAFG00000002091	RCL1	100	88.472	ENSSPUG00000016330	RCL1	100	88.472	Sphenodon_punctatus
ENSCAFG00000002091	RCL1	100	80.749	ENSSPAG00000018038	rcl1	100	80.749	Stegastes_partitus
ENSCAFG00000002091	RCL1	100	96.515	ENSSSCG00000005217	RCL1	83	96.515	Sus_scrofa
ENSCAFG00000002091	RCL1	100	84.000	ENSTGUG00000005138	RCL1	100	84.000	Taeniopygia_guttata
ENSCAFG00000002091	RCL1	99	79.730	ENSTRUG00000010493	rcl1	99	79.730	Takifugu_rubripes
ENSCAFG00000002091	RCL1	99	78.320	ENSTNIG00000013214	rcl1	99	78.320	Tetraodon_nigroviridis
ENSCAFG00000002091	RCL1	100	89.544	ENSTBEG00000016339	RCL1	100	89.544	Tupaia_belangeri
ENSCAFG00000002091	RCL1	100	95.979	ENSTTRG00000016525	RCL1	100	95.979	Tursiops_truncatus
ENSCAFG00000002091	RCL1	100	97.855	ENSUAMG00000005598	RCL1	100	97.855	Ursus_americanus
ENSCAFG00000002091	RCL1	88	97.554	ENSUMAG00000017890	RCL1	97	97.554	Ursus_maritimus
ENSCAFG00000002091	RCL1	88	97.859	ENSVPAG00000009188	RCL1	100	97.859	Vicugna_pacos
ENSCAFG00000002091	RCL1	88	100.000	ENSVVUG00000007304	RCL1	89	100.000	Vulpes_vulpes
ENSCAFG00000002091	RCL1	100	75.401	ENSXETG00000000592	rcl1	100	75.401	Xenopus_tropicalis
ENSCAFG00000002091	RCL1	99	80.270	ENSXCOG00000004922	rcl1	99	80.270	Xiphophorus_couchianus
ENSCAFG00000002091	RCL1	99	80.270	ENSXMAG00000022366	RCL1	99	80.270	Xiphophorus_maculatus