EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000002232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 1211 bases
Position: chr1:98004662-98005872
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000003248	RRM_1	PF00076.22	7.4e-20	1	1
ENSCAFP00000003248	HnRNPA1	PF11627.8	3.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000003502	-	993	-	ENSCAFP00000003248	330 (aa)	-	E2RF37

Gene Model

Click here to download ENSCAFG00000002232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000002232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000002232	-	93	62.701	ENSCAFG00000005164	-	65	71.628
ENSCAFG00000002232	-	71	79.592	ENSCAFG00000017316	-	73	79.592
ENSCAFG00000002232	-	88	59.406	ENSCAFG00000000687	-	54	82.530
ENSCAFG00000002232	-	51	35.119	ENSCAFG00000010283	MSI1	50	35.802
ENSCAFG00000002232	-	99	65.549	ENSCAFG00000032455	-	66	77.251
ENSCAFG00000002232	-	93	62.987	ENSCAFG00000006663	-	61	79.268
ENSCAFG00000002232	-	81	64.875	ENSCAFG00000030052	-	63	81.609
ENSCAFG00000002232	-	53	35.652	ENSCAFG00000016759	TARDBP	53	30.935
ENSCAFG00000002232	-	52	34.118	ENSCAFG00000019528	DAZAP1	70	34.118
ENSCAFG00000002232	-	60	42.211	ENSCAFG00000001132	HNRNPA0	56	52.288
ENSCAFG00000002232	-	51	68.862	ENSCAFG00000002885	HNRNPA2B1	58	69.136
ENSCAFG00000002232	-	51	76.048	ENSCAFG00000013497	HNRNPA3	73	57.991
ENSCAFG00000002232	-	92	59.365	ENSCAFG00000005762	-	53	61.780
ENSCAFG00000002232	-	91	48.173	ENSCAFG00000017424	-	55	59.375
ENSCAFG00000002232	-	93	64.610	ENSCAFG00000017180	-	66	74.057
ENSCAFG00000002232	-	86	61.484	ENSCAFG00000019097	-	82	77.358
ENSCAFG00000002232	-	93	67.208	ENSCAFG00000003493	-	67	76.636
ENSCAFG00000002232	-	93	53.896	ENSCAFG00000030783	-	65	57.075
ENSCAFG00000002232	-	93	64.286	ENSCAFG00000006327	-	76	76.667
ENSCAFG00000002232	-	56	58.065	ENSCAFG00000006110	-	62	65.541
ENSCAFG00000002232	-	93	58.125	ENSCAFG00000000389	-	66	66.038
ENSCAFG00000002232	-	62	80.263	ENSCAFG00000006036	-	75	80.263
ENSCAFG00000002232	-	53	73.714	ENSCAFG00000005307	-	81	66.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000002232	-	55	69.399	ENSAMEG00000015127	-	83	68.878	Ailuropoda_melanoleuca
ENSCAFG00000002232	-	60	70.909	ENSDNOG00000009228	-	85	76.923	Dasypus_novemcinctus
ENSCAFG00000002232	-	93	59.375	ENSPTRG00000031176	-	69	71.859	Pan_troglodytes