EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000002554 (Gene tree)
Gene ID: 611842
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 196136 bases
Position: chr10:47742907-47939042
Accession: 46790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000003722	S1	PF00575.23	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000004029	-	2973	XM_005626078	ENSCAFP00000003722	990 (aa)	XP_854655	E2R0G6
ENSCAFT00000049409	-	2926	-	ENSCAFP00000042464	942 (aa)	-	J9P9N1

Gene Model

Click here to download ENSCAFG00000002554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000002554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000002554	SRBD1	100	89.870	ENSG00000068784	SRBD1	100	89.870	Homo_sapiens
ENSCAFG00000002554	SRBD1	100	51.644	ENSAPOG00000005103	si:ch211-117n7.8	93	53.719	Acanthochromis_polyacanthus
ENSCAFG00000002554	SRBD1	100	96.061	ENSAMEG00000005993	SRBD1	100	96.061	Ailuropoda_melanoleuca
ENSCAFG00000002554	SRBD1	90	55.263	ENSACIG00000009875	si:ch211-117n7.8	91	55.531	Amphilophus_citrinellus
ENSCAFG00000002554	SRBD1	99	51.957	ENSAOCG00000024718	si:ch211-117n7.8	94	54.021	Amphiprion_ocellaris
ENSCAFG00000002554	SRBD1	96	53.231	ENSAPEG00000002645	si:ch211-117n7.8	99	53.231	Amphiprion_percula
ENSCAFG00000002554	SRBD1	84	57.661	ENSATEG00000010844	si:ch211-117n7.8	84	57.661	Anabas_testudineus
ENSCAFG00000002554	SRBD1	100	71.175	ENSAPLG00000006313	SRBD1	100	71.175	Anas_platyrhynchos
ENSCAFG00000002554	SRBD1	100	89.769	ENSANAG00000025573	SRBD1	100	89.769	Aotus_nancymaae
ENSCAFG00000002554	SRBD1	99	51.212	ENSACLG00000024219	si:ch211-117n7.8	94	52.826	Astatotilapia_calliptera
ENSCAFG00000002554	SRBD1	88	58.713	ENSAMXG00000004294	SRBD1	93	56.844	Astyanax_mexicanus
ENSCAFG00000002554	SRBD1	100	89.870	ENSBTAG00000007508	SRBD1	97	90.672	Bos_taurus
ENSCAFG00000002554	SRBD1	100	89.268	ENSCJAG00000000727	SRBD1	100	89.268	Callithrix_jacchus
ENSCAFG00000002554	SRBD1	100	96.667	ENSCAFG00020026284	SRBD1	99	96.729	Canis_lupus_dingo
ENSCAFG00000002554	SRBD1	100	90.271	ENSCHIG00000016535	SRBD1	98	91.073	Capra_hircus
ENSCAFG00000002554	SRBD1	100	91.091	ENSTSYG00000012797	SRBD1	100	91.091	Carlito_syrichta
ENSCAFG00000002554	SRBD1	100	89.839	ENSCPOG00000004773	SRBD1	100	89.839	Cavia_porcellus
ENSCAFG00000002554	SRBD1	100	90.471	ENSCCAG00000025589	SRBD1	100	90.471	Cebus_capucinus
ENSCAFG00000002554	SRBD1	100	90.873	ENSCATG00000039530	SRBD1	100	90.873	Cercocebus_atys
ENSCAFG00000002554	SRBD1	100	90.271	ENSCLAG00000008623	SRBD1	100	90.271	Chinchilla_lanigera
ENSCAFG00000002554	SRBD1	100	91.073	ENSCSAG00000013350	SRBD1	100	91.073	Chlorocebus_sabaeus
ENSCAFG00000002554	SRBD1	87	94.118	ENSCHOG00000003805	SRBD1	87	94.118	Choloepus_hoffmanni
ENSCAFG00000002554	SRBD1	100	73.992	ENSCPBG00000005677	SRBD1	100	74.194	Chrysemys_picta_bellii
ENSCAFG00000002554	SRBD1	79	42.551	ENSCING00000005950	-	99	42.551	Ciona_intestinalis
ENSCAFG00000002554	SRBD1	80	42.714	ENSCSAVG00000000861	-	99	42.714	Ciona_savignyi
ENSCAFG00000002554	SRBD1	99	90.754	ENSCANG00000016307	SRBD1	99	90.754	Colobus_angolensis_palliatus
ENSCAFG00000002554	SRBD1	100	85.356	ENSCGRG00001000513	Srbd1	100	85.356	Cricetulus_griseus_chok1gshd
ENSCAFG00000002554	SRBD1	100	85.356	ENSCGRG00000002283	Srbd1	100	85.356	Cricetulus_griseus_crigri
ENSCAFG00000002554	SRBD1	100	51.373	ENSCSEG00000000856	si:ch211-117n7.8	84	56.909	Cynoglossus_semilaevis
ENSCAFG00000002554	SRBD1	84	57.394	ENSCVAG00000020212	si:ch211-117n7.8	97	54.585	Cyprinodon_variegatus
ENSCAFG00000002554	SRBD1	100	90.700	ENSDNOG00000018686	SRBD1	100	90.700	Dasypus_novemcinctus
ENSCAFG00000002554	SRBD1	100	87.262	ENSDORG00000010468	Srbd1	100	87.262	Dipodomys_ordii
ENSCAFG00000002554	SRBD1	94	34.504	FBgn0051156	CG31156	98	34.704	Drosophila_melanogaster
ENSCAFG00000002554	SRBD1	89	82.740	ENSETEG00000000739	SRBD1	91	82.740	Echinops_telfairi
ENSCAFG00000002554	SRBD1	73	47.761	ENSEBUG00000008902	si:ch211-117n7.8	96	47.761	Eptatretus_burgeri
ENSCAFG00000002554	SRBD1	100	89.669	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSCAFG00000002554	SRBD1	100	93.280	ENSECAG00000013865	SRBD1	98	93.280	Equus_caballus
ENSCAFG00000002554	SRBD1	96	55.646	ENSELUG00000012592	si:ch211-117n7.8	91	55.849	Esox_lucius
ENSCAFG00000002554	SRBD1	100	95.186	ENSFCAG00000005101	SRBD1	100	95.186	Felis_catus
ENSCAFG00000002554	SRBD1	100	69.758	ENSFALG00000012966	SRBD1	100	69.456	Ficedula_albicollis
ENSCAFG00000002554	SRBD1	98	88.103	ENSFDAG00000016670	SRBD1	98	88.382	Fukomys_damarensis
ENSCAFG00000002554	SRBD1	96	52.923	ENSFHEG00000019480	si:ch211-117n7.8	92	52.923	Fundulus_heteroclitus
ENSCAFG00000002554	SRBD1	51	51.910	ENSGMOG00000018010	-	100	51.910	Gadus_morhua
ENSCAFG00000002554	SRBD1	100	71.058	ENSGALG00000009990	SRBD1	100	70.629	Gallus_gallus
ENSCAFG00000002554	SRBD1	88	54.878	ENSGAFG00000019664	si:ch211-117n7.8	89	54.878	Gambusia_affinis
ENSCAFG00000002554	SRBD1	63	61.085	ENSGACG00000010794	si:ch211-117n7.8	100	61.244	Gasterosteus_aculeatus
ENSCAFG00000002554	SRBD1	84	81.459	ENSGAGG00000006166	SRBD1	99	81.459	Gopherus_agassizii
ENSCAFG00000002554	SRBD1	97	90.309	ENSGGOG00000005910	SRBD1	99	90.239	Gorilla_gorilla
ENSCAFG00000002554	SRBD1	85	50.651	ENSHBUG00000013207	si:ch211-117n7.8	86	50.769	Haplochromis_burtoni
ENSCAFG00000002554	SRBD1	99	89.347	ENSHGLG00000018153	-	99	89.347	Heterocephalus_glaber_female
ENSCAFG00000002554	SRBD1	99	89.146	ENSHGLG00100015183	-	99	89.146	Heterocephalus_glaber_male
ENSCAFG00000002554	SRBD1	85	61.385	ENSIPUG00000009661	srbd1	94	56.936	Ictalurus_punctatus
ENSCAFG00000002554	SRBD1	100	90.973	ENSSTOG00000005898	SRBD1	100	90.973	Ictidomys_tridecemlineatus
ENSCAFG00000002554	SRBD1	100	80.681	ENSJJAG00000022244	Srbd1	100	80.681	Jaculus_jaculus
ENSCAFG00000002554	SRBD1	99	51.500	ENSKMAG00000003473	si:ch211-117n7.8	97	52.096	Kryptolebias_marmoratus
ENSCAFG00000002554	SRBD1	99	51.880	ENSLBEG00000027518	si:ch211-117n7.8	97	52.376	Labrus_bergylta
ENSCAFG00000002554	SRBD1	85	71.226	ENSLACG00000009790	SRBD1	100	71.226	Latimeria_chalumnae
ENSCAFG00000002554	SRBD1	100	57.171	ENSLOCG00000016360	si:ch211-117n7.8	99	57.171	Lepisosteus_oculatus
ENSCAFG00000002554	SRBD1	100	91.174	ENSMFAG00000042026	SRBD1	100	91.174	Macaca_fascicularis
ENSCAFG00000002554	SRBD1	100	90.973	ENSMMUG00000003490	SRBD1	100	90.973	Macaca_mulatta
ENSCAFG00000002554	SRBD1	100	88.465	ENSMNEG00000034701	SRBD1	100	88.465	Macaca_nemestrina
ENSCAFG00000002554	SRBD1	100	90.772	ENSMLEG00000000745	SRBD1	100	90.772	Mandrillus_leucophaeus
ENSCAFG00000002554	SRBD1	83	56.407	ENSMAMG00000021921	si:ch211-117n7.8	85	56.009	Mastacembelus_armatus
ENSCAFG00000002554	SRBD1	99	51.312	ENSMZEG00005027369	si:ch211-117n7.8	94	52.826	Maylandia_zebra
ENSCAFG00000002554	SRBD1	80	75.500	ENSMGAG00000010273	SRBD1	100	75.500	Meleagris_gallopavo
ENSCAFG00000002554	SRBD1	82	84.123	ENSMAUG00000013916	Srbd1	99	84.123	Mesocricetus_auratus
ENSCAFG00000002554	SRBD1	100	91.775	ENSMICG00000007835	SRBD1	100	91.775	Microcebus_murinus
ENSCAFG00000002554	SRBD1	100	84.253	ENSMOCG00000018716	Srbd1	100	84.253	Microtus_ochrogaster
ENSCAFG00000002554	SRBD1	84	56.471	ENSMMOG00000007507	si:ch211-117n7.8	87	56.471	Mola_mola
ENSCAFG00000002554	SRBD1	99	51.120	ENSMALG00000001562	si:ch211-117n7.8	83	56.842	Monopterus_albus
ENSCAFG00000002554	SRBD1	100	82.648	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSCAFG00000002554	SRBD1	100	82.648	ENSMUSG00000024135	Srbd1	100	82.648	Mus_musculus
ENSCAFG00000002554	SRBD1	100	81.545	MGP_PahariEiJ_G0020924	Srbd1	100	81.545	Mus_pahari
ENSCAFG00000002554	SRBD1	100	82.949	MGP_SPRETEiJ_G0022850	Srbd1	100	82.949	Mus_spretus
ENSCAFG00000002554	SRBD1	100	88.465	ENSMLUG00000007039	SRBD1	100	88.465	Myotis_lucifugus
ENSCAFG00000002554	SRBD1	100	84.570	ENSNGAG00000011893	Srbd1	100	84.180	Nannospalax_galili
ENSCAFG00000002554	SRBD1	84	56.161	ENSNBRG00000012873	si:ch211-117n7.8	85	56.280	Neolamprologus_brichardi
ENSCAFG00000002554	SRBD1	100	90.271	ENSNLEG00000016877	SRBD1	100	90.271	Nomascus_leucogenys
ENSCAFG00000002554	SRBD1	100	86.318	ENSODEG00000012095	SRBD1	100	86.318	Octodon_degus
ENSCAFG00000002554	SRBD1	99	51.158	ENSONIG00000000945	si:ch211-117n7.8	100	58.443	Oreochromis_niloticus
ENSCAFG00000002554	SRBD1	100	91.876	ENSOCUG00000015385	SRBD1	100	91.876	Oryctolagus_cuniculus
ENSCAFG00000002554	SRBD1	98	49.217	ENSORLG00000004427	si:ch211-117n7.8	82	53.783	Oryzias_latipes
ENSCAFG00000002554	SRBD1	99	50.723	ENSORLG00020012792	si:ch211-117n7.8	83	56.628	Oryzias_latipes_hni
ENSCAFG00000002554	SRBD1	99	50.918	ENSORLG00015018598	si:ch211-117n7.8	85	55.882	Oryzias_latipes_hsok
ENSCAFG00000002554	SRBD1	98	49.306	ENSOMEG00000012229	si:ch211-117n7.8	97	50.050	Oryzias_melastigma
ENSCAFG00000002554	SRBD1	100	85.055	ENSOGAG00000001076	SRBD1	100	85.055	Otolemur_garnettii
ENSCAFG00000002554	SRBD1	100	85.950	ENSOARG00000005958	SRBD1	100	86.725	Ovis_aries
ENSCAFG00000002554	SRBD1	100	90.271	ENSPPAG00000038442	SRBD1	100	90.271	Pan_paniscus
ENSCAFG00000002554	SRBD1	100	95.085	ENSPPRG00000003449	SRBD1	100	95.085	Panthera_pardus
ENSCAFG00000002554	SRBD1	100	95.085	ENSPTIG00000012495	SRBD1	100	95.085	Panthera_tigris_altaica
ENSCAFG00000002554	SRBD1	100	90.271	ENSPTRG00000011889	SRBD1	100	90.271	Pan_troglodytes
ENSCAFG00000002554	SRBD1	100	90.772	ENSPANG00000008063	SRBD1	100	90.772	Papio_anubis
ENSCAFG00000002554	SRBD1	96	55.556	ENSPKIG00000021973	si:ch211-117n7.8	97	54.425	Paramormyrops_kingsleyae
ENSCAFG00000002554	SRBD1	100	73.246	ENSPSIG00000008992	SRBD1	100	73.948	Pelodiscus_sinensis
ENSCAFG00000002554	SRBD1	90	53.575	ENSPMGG00000013348	si:ch211-117n7.8	98	51.749	Periophthalmus_magnuspinnatus
ENSCAFG00000002554	SRBD1	100	83.431	ENSPEMG00000020684	Srbd1	100	83.431	Peromyscus_maniculatus_bairdii
ENSCAFG00000002554	SRBD1	96	53.656	ENSPFOG00000010650	si:ch211-117n7.8	93	53.656	Poecilia_formosa
ENSCAFG00000002554	SRBD1	84	57.160	ENSPLAG00000002141	si:ch211-117n7.8	83	57.160	Poecilia_latipinna
ENSCAFG00000002554	SRBD1	96	53.862	ENSPMEG00000018537	si:ch211-117n7.8	93	53.862	Poecilia_mexicana
ENSCAFG00000002554	SRBD1	85	57.043	ENSPREG00000003258	si:ch211-117n7.8	86	57.043	Poecilia_reticulata
ENSCAFG00000002554	SRBD1	100	82.876	ENSPPYG00000012444	SRBD1	99	82.876	Pongo_abelii
ENSCAFG00000002554	SRBD1	82	82.804	ENSPCAG00000005629	SRBD1	85	82.804	Procavia_capensis
ENSCAFG00000002554	SRBD1	100	78.621	ENSPCOG00000017669	SRBD1	100	78.621	Propithecus_coquereli
ENSCAFG00000002554	SRBD1	100	82.146	ENSPVAG00000001782	SRBD1	100	82.146	Pteropus_vampyrus
ENSCAFG00000002554	SRBD1	85	54.181	ENSPNYG00000000508	si:ch211-117n7.8	86	54.299	Pundamilia_nyererei
ENSCAFG00000002554	SRBD1	89	59.136	ENSPNAG00000013492	SRBD1	91	59.358	Pygocentrus_nattereri
ENSCAFG00000002554	SRBD1	100	81.244	ENSRNOG00000014720	Srbd1	99	82.146	Rattus_norvegicus
ENSCAFG00000002554	SRBD1	99	90.452	ENSRBIG00000033486	SRBD1	99	90.452	Rhinopithecus_bieti
ENSCAFG00000002554	SRBD1	99	90.452	ENSRROG00000041599	SRBD1	99	90.452	Rhinopithecus_roxellana
ENSCAFG00000002554	SRBD1	100	89.769	ENSSBOG00000024982	SRBD1	100	89.769	Saimiri_boliviensis_boliviensis
ENSCAFG00000002554	SRBD1	84	59.882	ENSSFOG00015001128	si:ch211-117n7.8	90	59.882	Scleropages_formosus
ENSCAFG00000002554	SRBD1	99	51.060	ENSSMAG00000018256	si:ch211-117n7.8	82	57.796	Scophthalmus_maximus
ENSCAFG00000002554	SRBD1	96	52.738	ENSSLDG00000023189	si:ch211-117n7.8	96	52.738	Seriola_lalandi_dorsalis
ENSCAFG00000002554	SRBD1	100	79.137	ENSSARG00000009740	SRBD1	100	79.137	Sorex_araneus
ENSCAFG00000002554	SRBD1	86	78.404	ENSSPUG00000010475	SRBD1	100	72.660	Sphenodon_punctatus
ENSCAFG00000002554	SRBD1	86	54.420	ENSSPAG00000008092	-	86	54.879	Stegastes_partitus
ENSCAFG00000002554	SRBD1	100	92.177	ENSSSCG00000008445	SRBD1	98	92.578	Sus_scrofa
ENSCAFG00000002554	SRBD1	84	77.524	ENSTGUG00000003878	SRBD1	100	77.524	Taeniopygia_guttata
ENSCAFG00000002554	SRBD1	99	51.205	ENSTRUG00000007080	si:ch211-117n7.8	99	54.705	Takifugu_rubripes
ENSCAFG00000002554	SRBD1	99	50.391	ENSTNIG00000007464	si:ch211-117n7.8	97	51.008	Tetraodon_nigroviridis
ENSCAFG00000002554	SRBD1	76	100.000	ENSTBEG00000004556	SRBD1	76	100.000	Tupaia_belangeri
ENSCAFG00000002554	SRBD1	94	93.088	ENSTTRG00000011871	SRBD1	94	93.088	Tursiops_truncatus
ENSCAFG00000002554	SRBD1	100	95.859	ENSUAMG00000008126	SRBD1	100	94.147	Ursus_americanus
ENSCAFG00000002554	SRBD1	100	96.061	ENSUMAG00000012902	SRBD1	98	96.061	Ursus_maritimus
ENSCAFG00000002554	SRBD1	91	92.189	ENSVPAG00000006825	SRBD1	100	92.189	Vicugna_pacos
ENSCAFG00000002554	SRBD1	100	99.091	ENSVVUG00000005389	SRBD1	100	99.091	Vulpes_vulpes
ENSCAFG00000002554	SRBD1	100	52.692	ENSXETG00000002760	srbd1	100	52.788	Xenopus_tropicalis
ENSCAFG00000002554	SRBD1	88	55.322	ENSXMAG00000016861	si:ch211-117n7.8	88	55.322	Xiphophorus_maculatus