EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSCAFG00000003187 (Gene tree)
Gene ID: 403774
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 26304 bases
Position: chr10:64564351-64590654
Accession: 45259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000040655	MMR_HSR1	PF01926.23	1.3e-05	1	1
ENSCAFP00000004753	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000005128	-	827	-	ENSCAFP00000004753	250 (aa)	-	F1Q0H3
ENSCAFT00000049414	-	841	-	ENSCAFP00000040655	205 (aa)	-	P62822

Gene Model

Click here to download ENSCAFG00000003187's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000003187	RAB1A	80	47.619	ENSCAFG00000018755	RAB33A	71	47.619
ENSCAFG00000003187	RAB1A	99	92.157	ENSCAFG00000012855	RAB1B	100	92.157
ENSCAFG00000003187	RAB1A	79	42.236	ENSCAFG00000018727	RAB31	83	42.236
ENSCAFG00000003187	RAB1A	80	38.415	ENSCAFG00000009532	NRAS	86	38.415
ENSCAFG00000003187	RAB1A	83	44.767	ENSCAFG00000019640	RAB39B	81	44.767
ENSCAFG00000003187	RAB1A	99	44.554	ENSCAFG00000003629	RAB14	93	44.554
ENSCAFG00000003187	RAB1A	95	43.077	ENSCAFG00000015629	RAB5C	89	43.077
ENSCAFG00000003187	RAB1A	87	33.514	ENSCAFG00000012854	RERG	90	33.514
ENSCAFG00000003187	RAB1A	95	35.681	ENSCAFG00000013676	RAB36	72	35.681
ENSCAFG00000003187	RAB1A	69	31.544	ENSCAFG00000014581	ARL4D	73	31.544
ENSCAFG00000003187	RAB1A	95	43.814	ENSCAFG00000005814	RAB5A	90	43.814
ENSCAFG00000003187	RAB1A	81	50.602	ENSCAFG00000004616	RAB30	82	50.602
ENSCAFG00000003187	RAB1A	78	39.264	ENSCAFG00000004157	RAB7A	79	39.264
ENSCAFG00000003187	RAB1A	90	48.108	ENSCAFG00000007153	RAB2A	91	45.238
ENSCAFG00000003187	RAB1A	94	37.879	ENSCAFG00000028870	RAB6A	94	37.879
ENSCAFG00000003187	RAB1A	95	43.367	ENSCAFG00000000087	RAB5B	90	43.367
ENSCAFG00000003187	RAB1A	100	45.581	ENSCAFG00000032060	RAB11B	99	45.581
ENSCAFG00000003187	RAB1A	90	48.649	ENSCAFG00000005641	RAB2B	86	48.649
ENSCAFG00000003187	RAB1A	82	32.544	ENSCAFG00000004894	RHEB	91	32.544
ENSCAFG00000003187	RAB1A	76	39.623	ENSCAFG00000011750	RAB9A	79	39.623
ENSCAFG00000003187	RAB1A	71	36.986	ENSCAFG00000031029	HRAS	58	36.986
ENSCAFG00000003187	RAB1A	57	31.092	ENSCAFG00000012001	ARL4C	66	31.092
ENSCAFG00000003187	RAB1A	85	52.299	ENSCAFG00000017255	RAB11A	81	52.299
ENSCAFG00000003187	RAB1A	80	35.928	ENSCAFG00000007541	MRAS	80	35.928
ENSCAFG00000003187	RAB1A	84	32.948	ENSCAFG00000002459	RAB23	73	32.948
ENSCAFG00000003187	RAB1A	81	46.988	ENSCAFG00000016866	RAB25	78	46.988
ENSCAFG00000003187	RAB1A	80	37.576	ENSCAFG00000011428	KRAS	95	35.912
ENSCAFG00000003187	RAB1A	57	31.933	ENSCAFG00000002318	ARL4A	59	31.933
ENSCAFG00000003187	RAB1A	76	39.623	ENSCAFG00000017812	RAB9B	79	39.623
ENSCAFG00000003187	RAB1A	77	39.752	ENSCAFG00000018780	RAB34	62	39.752
ENSCAFG00000003187	RAB1A	57	32.203	ENSCAFG00000005617	ARL8B	61	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000003187	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSCAFG00000003187	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSCAFG00000003187	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSCAFG00000003187	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSCAFG00000003187	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSCAFG00000003187	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSCAFG00000003187	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSCAFG00000003187	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSCAFG00000003187	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSCAFG00000003187	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSCAFG00000003187	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSCAFG00000003187	RAB1A	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSCAFG00000003187	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSCAFG00000003187	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSCAFG00000003187	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSCAFG00000003187	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSCAFG00000003187	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSCAFG00000003187	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSCAFG00000003187	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSCAFG00000003187	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCAFG00000003187	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSCAFG00000003187	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSCAFG00000003187	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSCAFG00000003187	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSCAFG00000003187	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSCAFG00000003187	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSCAFG00000003187	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSCAFG00000003187	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSCAFG00000003187	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSCAFG00000003187	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSCAFG00000003187	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSCAFG00000003187	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSCAFG00000003187	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSCAFG00000003187	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSCAFG00000003187	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSCAFG00000003187	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSCAFG00000003187	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSCAFG00000003187	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSCAFG00000003187	RAB1A	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSCAFG00000003187	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSCAFG00000003187	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSCAFG00000003187	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSCAFG00000003187	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSCAFG00000003187	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSCAFG00000003187	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSCAFG00000003187	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSCAFG00000003187	RAB1A	96	100.000	ENSMMUG00000021721	RAB1A	97	94.762	Macaca_mulatta
ENSCAFG00000003187	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSCAFG00000003187	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSCAFG00000003187	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSCAFG00000003187	RAB1A	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSCAFG00000003187	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSCAFG00000003187	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSCAFG00000003187	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSCAFG00000003187	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSCAFG00000003187	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSCAFG00000003187	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSCAFG00000003187	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSCAFG00000003187	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSCAFG00000003187	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSCAFG00000003187	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	92	98.268	Mustela_putorius_furo
ENSCAFG00000003187	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSCAFG00000003187	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSCAFG00000003187	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSCAFG00000003187	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSCAFG00000003187	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSCAFG00000003187	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSCAFG00000003187	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSCAFG00000003187	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSCAFG00000003187	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSCAFG00000003187	RAB1A	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSCAFG00000003187	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSCAFG00000003187	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSCAFG00000003187	RAB1A	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSCAFG00000003187	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSCAFG00000003187	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSCAFG00000003187	RAB1A	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSCAFG00000003187	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSCAFG00000003187	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSCAFG00000003187	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSCAFG00000003187	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSCAFG00000003187	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSCAFG00000003187	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSCAFG00000003187	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSCAFG00000003187	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSCAFG00000003187	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSCAFG00000003187	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSCAFG00000003187	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00000003187	RAB1A	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSCAFG00000003187	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSCAFG00000003187	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSCAFG00000003187	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSCAFG00000003187	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSCAFG00000003187	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSCAFG00000003187	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSCAFG00000003187	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSCAFG00000003187	RAB1A	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSCAFG00000003187	RAB1A	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSCAFG00000003187	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSCAFG00000003187	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000045	autophagosome assembly	-	ISS	Process
GO:0003924	GTPase activity	-	ISS	Function
GO:0005515	protein binding	7957092.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005769	early endosome	-	IEA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0006888	ER to Golgi vesicle-mediated transport	-	ISS	Process
GO:0006897	endocytosis	-	ISS	Process
GO:0006914	autophagy	-	ISS	Process
GO:0016477	cell migration	-	ISS	Process
GO:0030252	growth hormone secretion	-	ISS	Process
GO:0042470	melanosome	-	IEA	Component
GO:0042742	defense response to bacterium	-	ISS	Process
GO:0047496	vesicle transport along microtubule	-	ISS	Process
GO:0070382	exocytic vesicle	18504258.	IDA	Component
GO:0072606	interleukin-8 secretion	-	ISS	Process