EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000003223 (Gene tree)
Gene ID: 482708
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 76680 bases
Position: chr16:12782398-12859077
Accession: 39415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000004795	RRM_1	PF00076.22	7e-06	1	1
ENSCAFP00000004793	RRM_1	PF00076.22	8.6e-06	1	1
ENSCAFP00000004791	RRM_1	PF00076.22	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000005176	-	2133	XM_005629582	ENSCAFP00000004791	710 (aa)	XP_005629639	E2QXU8
ENSCAFT00000005180	-	1811	XM_005629585	ENSCAFP00000004795	572 (aa)	XP_005629642	E2QXU6
ENSCAFT00000005178	-	1926	XM_005629584	ENSCAFP00000004793	642 (aa)	XP_005629641	E2QXU7

Gene Model

Click here to download ENSCAFG00000003223's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000003223	CNOT4	100	99.533	ENSG00000080802	CNOT4	100	99.533	Homo_sapiens
ENSCAFG00000003223	CNOT4	93	90.566	ENSAPOG00000016272	cnot4a	98	74.567	Acanthochromis_polyacanthus
ENSCAFG00000003223	CNOT4	97	98.986	ENSAMEG00000012081	CNOT4	91	99.544	Ailuropoda_melanoleuca
ENSCAFG00000003223	CNOT4	100	65.455	ENSACIG00000003011	cnot4a	100	60.719	Amphilophus_citrinellus
ENSCAFG00000003223	CNOT4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
ENSCAFG00000003223	CNOT4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
ENSCAFG00000003223	CNOT4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
ENSCAFG00000003223	CNOT4	100	88.583	ENSAPLG00000016441	CNOT4	100	88.583	Anas_platyrhynchos
ENSCAFG00000003223	CNOT4	100	88.451	ENSACAG00000011154	CNOT4	100	88.451	Anolis_carolinensis
ENSCAFG00000003223	CNOT4	100	99.650	ENSANAG00000032156	CNOT4	100	99.650	Aotus_nancymaae
ENSCAFG00000003223	CNOT4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
ENSCAFG00000003223	CNOT4	100	92.620	ENSAMXG00000011473	cnot4b	100	71.704	Astyanax_mexicanus
ENSCAFG00000003223	CNOT4	100	72.603	ENSAMXG00000001373	cnot4a	100	71.689	Astyanax_mexicanus
ENSCAFG00000003223	CNOT4	100	99.377	ENSBTAG00000017919	CNOT4	100	99.377	Bos_taurus
ENSCAFG00000003223	CNOT4	100	99.650	ENSCJAG00000012532	CNOT4	100	99.650	Callithrix_jacchus
ENSCAFG00000003223	CNOT4	100	100.000	ENSCAFG00020000093	CNOT4	100	100.000	Canis_lupus_dingo
ENSCAFG00000003223	CNOT4	100	99.825	ENSCHIG00000010955	CNOT4	100	99.825	Capra_hircus
ENSCAFG00000003223	CNOT4	100	99.825	ENSTSYG00000000893	CNOT4	100	99.825	Carlito_syrichta
ENSCAFG00000003223	CNOT4	99	98.039	ENSCAPG00000006213	CNOT4	100	95.794	Cavia_aperea
ENSCAFG00000003223	CNOT4	100	98.601	ENSCPOG00000011526	CNOT4	100	98.601	Cavia_porcellus
ENSCAFG00000003223	CNOT4	100	99.533	ENSCCAG00000024414	CNOT4	100	99.533	Cebus_capucinus
ENSCAFG00000003223	CNOT4	100	99.533	ENSCATG00000022607	CNOT4	100	99.533	Cercocebus_atys
ENSCAFG00000003223	CNOT4	100	99.126	ENSCLAG00000001857	CNOT4	100	99.126	Chinchilla_lanigera
ENSCAFG00000003223	CNOT4	100	99.437	ENSCSAG00000009096	CNOT4	100	99.437	Chlorocebus_sabaeus
ENSCAFG00000003223	CNOT4	70	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSCAFG00000003223	CNOT4	100	95.652	ENSCPBG00000004959	CNOT4	100	95.652	Chrysemys_picta_bellii
ENSCAFG00000003223	CNOT4	64	69.323	ENSCING00000004364	-	89	42.523	Ciona_intestinalis
ENSCAFG00000003223	CNOT4	100	99.476	ENSCANG00000029319	CNOT4	100	99.476	Colobus_angolensis_palliatus
ENSCAFG00000003223	CNOT4	100	99.221	ENSCGRG00001014651	Cnot4	100	99.221	Cricetulus_griseus_chok1gshd
ENSCAFG00000003223	CNOT4	100	99.476	ENSCGRG00000005727	Cnot4	100	99.476	Cricetulus_griseus_crigri
ENSCAFG00000003223	CNOT4	94	90.566	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
ENSCAFG00000003223	CNOT4	99	90.566	ENSCVAG00000009399	cnot4a	100	73.740	Cyprinodon_variegatus
ENSCAFG00000003223	CNOT4	100	67.290	ENSDARG00000007639	cnot4b	100	66.296	Danio_rerio
ENSCAFG00000003223	CNOT4	100	70.370	ENSDARG00000007045	cnot4a	100	69.870	Danio_rerio
ENSCAFG00000003223	CNOT4	100	97.896	ENSDNOG00000009409	CNOT4	100	97.896	Dasypus_novemcinctus
ENSCAFG00000003223	CNOT4	100	98.783	ENSDORG00000012268	Cnot4	100	98.783	Dipodomys_ordii
ENSCAFG00000003223	CNOT4	100	92.286	ENSETEG00000013407	CNOT4	89	94.792	Echinops_telfairi
ENSCAFG00000003223	CNOT4	100	99.065	ENSEASG00005014430	CNOT4	100	99.065	Equus_asinus_asinus
ENSCAFG00000003223	CNOT4	100	99.065	ENSECAG00000020262	CNOT4	100	99.065	Equus_caballus
ENSCAFG00000003223	CNOT4	100	73.669	ENSELUG00000011540	cnot4b	97	72.113	Esox_lucius
ENSCAFG00000003223	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSCAFG00000003223	CNOT4	100	100.000	ENSFCAG00000011904	CNOT4	100	100.000	Felis_catus
ENSCAFG00000003223	CNOT4	100	88.976	ENSFALG00000011194	CNOT4	100	88.976	Ficedula_albicollis
ENSCAFG00000003223	CNOT4	100	99.221	ENSFDAG00000013525	CNOT4	100	99.221	Fukomys_damarensis
ENSCAFG00000003223	CNOT4	100	89.259	ENSFHEG00000006608	cnot4a	100	73.445	Fundulus_heteroclitus
ENSCAFG00000003223	CNOT4	95	59.647	ENSGMOG00000001329	cnot4a	97	60.618	Gadus_morhua
ENSCAFG00000003223	CNOT4	100	94.951	ENSGALG00000011682	CNOT4	100	94.951	Gallus_gallus
ENSCAFG00000003223	CNOT4	100	72.913	ENSGACG00000004276	cnot4a	91	90.189	Gasterosteus_aculeatus
ENSCAFG00000003223	CNOT4	100	95.091	ENSGAGG00000017331	CNOT4	100	95.091	Gopherus_agassizii
ENSCAFG00000003223	CNOT4	92	99.085	ENSGGOG00000000142	CNOT4	99	99.085	Gorilla_gorilla
ENSCAFG00000003223	CNOT4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
ENSCAFG00000003223	CNOT4	100	99.221	ENSHGLG00000011533	CNOT4	100	99.221	Heterocephalus_glaber_female
ENSCAFG00000003223	CNOT4	100	98.783	ENSHGLG00100013058	CNOT4	100	98.783	Heterocephalus_glaber_male
ENSCAFG00000003223	CNOT4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
ENSCAFG00000003223	CNOT4	100	70.901	ENSIPUG00000016994	cnot4b	100	70.458	Ictalurus_punctatus
ENSCAFG00000003223	CNOT4	96	91.481	ENSIPUG00000006393	cnot4	91	91.481	Ictalurus_punctatus
ENSCAFG00000003223	CNOT4	100	99.825	ENSSTOG00000007717	CNOT4	100	99.825	Ictidomys_tridecemlineatus
ENSCAFG00000003223	CNOT4	100	81.818	ENSJJAG00000019991	-	100	81.818	Jaculus_jaculus
ENSCAFG00000003223	CNOT4	100	99.476	ENSJJAG00000016618	Cnot4	100	99.476	Jaculus_jaculus
ENSCAFG00000003223	CNOT4	94	90.566	ENSKMAG00000004581	cnot4a	100	72.948	Kryptolebias_marmoratus
ENSCAFG00000003223	CNOT4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
ENSCAFG00000003223	CNOT4	100	83.838	ENSLACG00000002647	CNOT4	99	83.838	Latimeria_chalumnae
ENSCAFG00000003223	CNOT4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
ENSCAFG00000003223	CNOT4	100	97.475	ENSLAFG00000000709	CNOT4	100	97.475	Loxodonta_africana
ENSCAFG00000003223	CNOT4	100	99.650	ENSMFAG00000046349	CNOT4	100	99.650	Macaca_fascicularis
ENSCAFG00000003223	CNOT4	100	99.533	ENSMMUG00000016181	CNOT4	100	99.533	Macaca_mulatta
ENSCAFG00000003223	CNOT4	100	99.650	ENSMNEG00000042164	CNOT4	100	99.650	Macaca_nemestrina
ENSCAFG00000003223	CNOT4	100	99.650	ENSMLEG00000032709	CNOT4	100	99.650	Mandrillus_leucophaeus
ENSCAFG00000003223	CNOT4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
ENSCAFG00000003223	CNOT4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
ENSCAFG00000003223	CNOT4	100	88.451	ENSMGAG00000011788	CNOT4	100	88.451	Meleagris_gallopavo
ENSCAFG00000003223	CNOT4	100	99.065	ENSMAUG00000020415	Cnot4	100	99.065	Mesocricetus_auratus
ENSCAFG00000003223	CNOT4	100	99.844	ENSMICG00000001667	CNOT4	100	99.844	Microcebus_murinus
ENSCAFG00000003223	CNOT4	100	99.065	ENSMOCG00000020955	Cnot4	100	99.065	Microtus_ochrogaster
ENSCAFG00000003223	CNOT4	94	76.374	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSCAFG00000003223	CNOT4	100	97.042	ENSMODG00000014068	CNOT4	100	97.042	Monodelphis_domestica
ENSCAFG00000003223	CNOT4	93	90.566	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
ENSCAFG00000003223	CNOT4	100	99.129	MGP_CAROLIEiJ_G0028217	Cnot4	100	99.129	Mus_caroli
ENSCAFG00000003223	CNOT4	100	99.301	ENSMUSG00000038784	Cnot4	100	99.301	Mus_musculus
ENSCAFG00000003223	CNOT4	100	99.301	MGP_PahariEiJ_G0021974	Cnot4	100	99.301	Mus_pahari
ENSCAFG00000003223	CNOT4	100	98.951	MGP_SPRETEiJ_G0029216	Cnot4	100	98.951	Mus_spretus
ENSCAFG00000003223	CNOT4	100	100.000	ENSMPUG00000004089	CNOT4	100	100.000	Mustela_putorius_furo
ENSCAFG00000003223	CNOT4	100	99.377	ENSMLUG00000008260	CNOT4	100	99.377	Myotis_lucifugus
ENSCAFG00000003223	CNOT4	100	98.754	ENSNGAG00000015030	Cnot4	100	98.754	Nannospalax_galili
ENSCAFG00000003223	CNOT4	100	71.579	ENSNBRG00000021144	cnot4a	100	71.429	Neolamprologus_brichardi
ENSCAFG00000003223	CNOT4	100	99.221	ENSNLEG00000013352	CNOT4	100	99.221	Nomascus_leucogenys
ENSCAFG00000003223	CNOT4	88	97.985	ENSOPRG00000001023	CNOT4	82	97.985	Ochotona_princeps
ENSCAFG00000003223	CNOT4	100	98.598	ENSODEG00000012975	CNOT4	100	98.598	Octodon_degus
ENSCAFG00000003223	CNOT4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
ENSCAFG00000003223	CNOT4	100	96.067	ENSOANG00000005006	CNOT4	100	96.067	Ornithorhynchus_anatinus
ENSCAFG00000003223	CNOT4	100	99.296	ENSOCUG00000013448	CNOT4	100	99.296	Oryctolagus_cuniculus
ENSCAFG00000003223	CNOT4	100	73.130	ENSORLG00000003727	cnot4a	91	90.943	Oryzias_latipes
ENSCAFG00000003223	CNOT4	100	72.851	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
ENSCAFG00000003223	CNOT4	100	73.282	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
ENSCAFG00000003223	CNOT4	100	72.214	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
ENSCAFG00000003223	CNOT4	100	99.018	ENSOGAG00000015499	CNOT4	100	99.018	Otolemur_garnettii
ENSCAFG00000003223	CNOT4	100	98.317	ENSOARG00000008803	CNOT4	100	98.317	Ovis_aries
ENSCAFG00000003223	CNOT4	100	99.221	ENSPPAG00000041937	CNOT4	100	99.221	Pan_paniscus
ENSCAFG00000003223	CNOT4	100	100.000	ENSPPRG00000023940	CNOT4	100	100.000	Panthera_pardus
ENSCAFG00000003223	CNOT4	100	100.000	ENSPTIG00000016601	CNOT4	100	100.000	Panthera_tigris_altaica
ENSCAFG00000003223	CNOT4	100	99.377	ENSPTRG00000019727	CNOT4	100	99.377	Pan_troglodytes
ENSCAFG00000003223	CNOT4	100	99.377	ENSPANG00000017724	CNOT4	100	99.377	Papio_anubis
ENSCAFG00000003223	CNOT4	100	71.981	ENSPKIG00000018137	cnot4a	100	71.672	Paramormyrops_kingsleyae
ENSCAFG00000003223	CNOT4	100	87.680	ENSPSIG00000011256	CNOT4	100	87.680	Pelodiscus_sinensis
ENSCAFG00000003223	CNOT4	100	73.193	ENSPMGG00000005671	cnot4a	100	73.042	Periophthalmus_magnuspinnatus
ENSCAFG00000003223	CNOT4	100	99.065	ENSPEMG00000021566	Cnot4	100	99.065	Peromyscus_maniculatus_bairdii
ENSCAFG00000003223	CNOT4	100	96.620	ENSPCIG00000029622	CNOT4	96	96.620	Phascolarctos_cinereus
ENSCAFG00000003223	CNOT4	59	88.321	ENSPFOG00000002228	cnot4a	97	58.207	Poecilia_formosa
ENSCAFG00000003223	CNOT4	100	73.333	ENSPLAG00000001780	cnot4a	100	72.727	Poecilia_latipinna
ENSCAFG00000003223	CNOT4	100	73.333	ENSPMEG00000006852	cnot4a	100	72.727	Poecilia_mexicana
ENSCAFG00000003223	CNOT4	100	72.061	ENSPREG00000008171	cnot4a	100	70.683	Poecilia_reticulata
ENSCAFG00000003223	CNOT4	100	99.296	ENSPPYG00000018026	CNOT4	100	99.296	Pongo_abelii
ENSCAFG00000003223	CNOT4	100	100.000	ENSPCOG00000019907	CNOT4	100	100.000	Propithecus_coquereli
ENSCAFG00000003223	CNOT4	97	96.812	ENSPVAG00000004905	CNOT4	90	96.812	Pteropus_vampyrus
ENSCAFG00000003223	CNOT4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
ENSCAFG00000003223	CNOT4	100	93.727	ENSPNAG00000008679	cnot4b	100	74.405	Pygocentrus_nattereri
ENSCAFG00000003223	CNOT4	99	91.513	ENSPNAG00000020433	cnot4a	100	72.268	Pygocentrus_nattereri
ENSCAFG00000003223	CNOT4	100	97.887	ENSRNOG00000010795	Cnot4	100	97.887	Rattus_norvegicus
ENSCAFG00000003223	CNOT4	100	99.533	ENSRBIG00000043977	CNOT4	100	99.533	Rhinopithecus_bieti
ENSCAFG00000003223	CNOT4	100	99.476	ENSSBOG00000020808	CNOT4	100	99.476	Saimiri_boliviensis_boliviensis
ENSCAFG00000003223	CNOT4	100	96.901	ENSSHAG00000013639	CNOT4	100	96.901	Sarcophilus_harrisii
ENSCAFG00000003223	CNOT4	100	91.912	ENSSFOG00015017285	CNOT4	92	91.912	Scleropages_formosus
ENSCAFG00000003223	CNOT4	100	90.074	ENSSFOG00015002019	cnot4a	91	90.074	Scleropages_formosus
ENSCAFG00000003223	CNOT4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
ENSCAFG00000003223	CNOT4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
ENSCAFG00000003223	CNOT4	100	71.121	ENSSDUG00000018585	cnot4b	100	71.121	Seriola_dumerili
ENSCAFG00000003223	CNOT4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
ENSCAFG00000003223	CNOT4	100	62.745	ENSSLDG00000014347	cnot4b	92	60.784	Seriola_lalandi_dorsalis
ENSCAFG00000003223	CNOT4	100	95.950	ENSSPUG00000004677	CNOT4	100	95.950	Sphenodon_punctatus
ENSCAFG00000003223	CNOT4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
ENSCAFG00000003223	CNOT4	100	99.825	ENSSSCG00000021354	CNOT4	100	99.825	Sus_scrofa
ENSCAFG00000003223	CNOT4	100	89.108	ENSTGUG00000009161	CNOT4	100	89.108	Taeniopygia_guttata
ENSCAFG00000003223	CNOT4	100	89.259	ENSTRUG00000016861	cnot4a	92	89.259	Takifugu_rubripes
ENSCAFG00000003223	CNOT4	100	70.890	ENSTNIG00000016000	cnot4a	100	70.054	Tetraodon_nigroviridis
ENSCAFG00000003223	CNOT4	94	96.863	ENSTBEG00000002202	CNOT4	86	93.601	Tupaia_belangeri
ENSCAFG00000003223	CNOT4	97	97.974	ENSTTRG00000005122	CNOT4	90	97.974	Tursiops_truncatus
ENSCAFG00000003223	CNOT4	100	100.000	ENSUAMG00000026759	CNOT4	100	100.000	Ursus_americanus
ENSCAFG00000003223	CNOT4	100	99.304	ENSUMAG00000015351	CNOT4	100	99.304	Ursus_maritimus
ENSCAFG00000003223	CNOT4	100	99.439	ENSVVUG00000006200	CNOT4	100	99.439	Vulpes_vulpes
ENSCAFG00000003223	CNOT4	100	98.182	ENSXETG00000010594	cnot4	90	98.182	Xenopus_tropicalis
ENSCAFG00000003223	CNOT4	94	72.949	ENSXCOG00000020824	cnot4a	98	71.822	Xiphophorus_couchianus
ENSCAFG00000003223	CNOT4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus