EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000003259 (Gene tree)
Gene ID: 475648
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 11016 bases
Position: chr17:2117074-2128089
Accession: 56747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000036857	RNase_H	PF00075.24	1.2e-45	1	1
ENSCAFP00000004840	RNase_H	PF00075.24	1.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000005229	-	867	-	ENSCAFP00000004840	288 (aa)	-	E2R8B0
ENSCAFT00000044124	-	1803	XM_532858	ENSCAFP00000036857	285 (aa)	XP_532858	J9NUL8

Gene Model

Click here to download ENSCAFG00000003259's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000003259	RNASEH1	100	81.882	ENSG00000171865	RNASEH1	100	81.882	Homo_sapiens
ENSCAFG00000003259	RNASEH1	98	53.061	ENSAPOG00000000412	rnaseh1	96	53.741	Acanthochromis_polyacanthus
ENSCAFG00000003259	RNASEH1	94	92.884	ENSAMEG00000018433	RNASEH1	100	91.228	Ailuropoda_melanoleuca
ENSCAFG00000003259	RNASEH1	98	52.740	ENSACIG00000014666	rnaseh1	95	53.082	Amphilophus_citrinellus
ENSCAFG00000003259	RNASEH1	98	54.422	ENSAOCG00000015210	rnaseh1	96	54.762	Amphiprion_ocellaris
ENSCAFG00000003259	RNASEH1	98	54.082	ENSAPEG00000014104	rnaseh1	95	54.422	Amphiprion_percula
ENSCAFG00000003259	RNASEH1	98	52.381	ENSATEG00000000598	rnaseh1	94	54.851	Anabas_testudineus
ENSCAFG00000003259	RNASEH1	85	62.548	ENSAPLG00000001961	RNASEH1	100	62.548	Anas_platyrhynchos
ENSCAFG00000003259	RNASEH1	90	54.392	ENSACAG00000016857	rnaseh1	92	54.392	Anolis_carolinensis
ENSCAFG00000003259	RNASEH1	100	82.007	ENSANAG00000024055	RNASEH1	100	82.007	Aotus_nancymaae
ENSCAFG00000003259	RNASEH1	98	51.000	ENSACLG00000006741	rnaseh1	94	51.827	Astatotilapia_calliptera
ENSCAFG00000003259	RNASEH1	90	50.566	ENSAMXG00000042940	rnaseh1	97	50.566	Astyanax_mexicanus
ENSCAFG00000003259	RNASEH1	100	79.649	ENSBTAG00000016235	RNASEH1	100	79.649	Bos_taurus
ENSCAFG00000003259	RNASEH1	89	41.797	WBGene00004382	rnh-1.0	95	41.797	Caenorhabditis_elegans
ENSCAFG00000003259	RNASEH1	100	80.205	ENSCJAG00000035450	RNASEH1	100	80.205	Callithrix_jacchus
ENSCAFG00000003259	RNASEH1	54	98.052	ENSCAFG00020004994	RNASEH1	99	98.052	Canis_lupus_dingo
ENSCAFG00000003259	RNASEH1	100	80.702	ENSCHIG00000022264	-	100	80.702	Capra_hircus
ENSCAFG00000003259	RNASEH1	83	67.373	ENSCHIG00000022230	-	100	67.373	Capra_hircus
ENSCAFG00000003259	RNASEH1	100	81.185	ENSTSYG00000012926	RNASEH1	99	81.185	Carlito_syrichta
ENSCAFG00000003259	RNASEH1	85	83.128	ENSCAPG00000004813	RNASEH1	99	83.128	Cavia_aperea
ENSCAFG00000003259	RNASEH1	100	78.746	ENSCPOG00000022278	Rnaseh1	97	78.746	Cavia_porcellus
ENSCAFG00000003259	RNASEH1	100	81.443	ENSCCAG00000038017	RNASEH1	100	81.443	Cebus_capucinus
ENSCAFG00000003259	RNASEH1	100	79.791	ENSCATG00000016515	-	100	79.791	Cercocebus_atys
ENSCAFG00000003259	RNASEH1	100	72.125	ENSCATG00000016818	-	100	72.318	Cercocebus_atys
ENSCAFG00000003259	RNASEH1	100	78.746	ENSCLAG00000002440	RNASEH1	100	78.746	Chinchilla_lanigera
ENSCAFG00000003259	RNASEH1	100	79.443	ENSCSAG00000006943	RNASEH1	100	79.443	Chlorocebus_sabaeus
ENSCAFG00000003259	RNASEH1	71	84.236	ENSCHOG00000008547	RNASEH1	99	84.236	Choloepus_hoffmanni
ENSCAFG00000003259	RNASEH1	92	63.504	ENSCPBG00000021620	RNASEH1	98	64.286	Chrysemys_picta_bellii
ENSCAFG00000003259	RNASEH1	90	37.993	ENSCING00000014054	-	92	38.043	Ciona_intestinalis
ENSCAFG00000003259	RNASEH1	75	36.797	ENSCSAVG00000000009	-	96	36.797	Ciona_savignyi
ENSCAFG00000003259	RNASEH1	100	79.443	ENSCANG00000037763	RNASEH1	100	79.443	Colobus_angolensis_palliatus
ENSCAFG00000003259	RNASEH1	100	75.524	ENSCGRG00001008950	Rnaseh1	100	76.224	Cricetulus_griseus_chok1gshd
ENSCAFG00000003259	RNASEH1	100	75.524	ENSCGRG00000006029	Rnaseh1	100	76.224	Cricetulus_griseus_crigri
ENSCAFG00000003259	RNASEH1	99	51.557	ENSCSEG00000005741	rnaseh1	94	52.098	Cynoglossus_semilaevis
ENSCAFG00000003259	RNASEH1	91	53.381	ENSCVAG00000018717	rnaseh1	92	53.381	Cyprinodon_variegatus
ENSCAFG00000003259	RNASEH1	89	55.639	ENSDARG00000042571	rnaseh1	98	54.043	Danio_rerio
ENSCAFG00000003259	RNASEH1	100	77.700	ENSDNOG00000016056	RNASEH1	100	77.700	Dasypus_novemcinctus
ENSCAFG00000003259	RNASEH1	100	77.895	ENSDORG00000000704	Rnaseh1	100	77.895	Dipodomys_ordii
ENSCAFG00000003259	RNASEH1	89	36.986	FBgn0023171	rnh1	92	37.024	Drosophila_melanogaster
ENSCAFG00000003259	RNASEH1	100	74.564	ENSETEG00000012674	RNASEH1	100	74.564	Echinops_telfairi
ENSCAFG00000003259	RNASEH1	89	47.241	ENSEBUG00000008898	rnaseh1	97	47.387	Eptatretus_burgeri
ENSCAFG00000003259	RNASEH1	91	46.565	ENSEBUG00000006116	rnaseh1	79	46.565	Eptatretus_burgeri
ENSCAFG00000003259	RNASEH1	100	84.321	ENSEASG00005022200	RNASEH1	98	84.321	Equus_asinus_asinus
ENSCAFG00000003259	RNASEH1	100	83.972	ENSECAG00000020695	RNASEH1	98	83.972	Equus_caballus
ENSCAFG00000003259	RNASEH1	98	50.680	ENSELUG00000010112	rnaseh1	98	50.680	Esox_lucius
ENSCAFG00000003259	RNASEH1	100	89.123	ENSFCAG00000025832	RNASEH1	100	89.123	Felis_catus
ENSCAFG00000003259	RNASEH1	96	60.000	ENSFALG00000002069	RNASEH1	98	60.000	Ficedula_albicollis
ENSCAFG00000003259	RNASEH1	100	76.655	ENSFDAG00000002035	RNASEH1	88	76.655	Fukomys_damarensis
ENSCAFG00000003259	RNASEH1	98	53.357	ENSGMOG00000013818	rnaseh1	96	53.357	Gadus_morhua
ENSCAFG00000003259	RNASEH1	96	61.379	ENSGALG00000016389	RNASEH1	98	61.379	Gallus_gallus
ENSCAFG00000003259	RNASEH1	98	51.020	ENSGAFG00000001776	rnaseh1	98	51.020	Gambusia_affinis
ENSCAFG00000003259	RNASEH1	98	52.740	ENSGACG00000011935	rnaseh1	98	52.740	Gasterosteus_aculeatus
ENSCAFG00000003259	RNASEH1	90	64.103	ENSGAGG00000009150	RNASEH1	62	64.103	Gopherus_agassizii
ENSCAFG00000003259	RNASEH1	100	81.533	ENSGGOG00000034822	RNASEH1	100	81.533	Gorilla_gorilla
ENSCAFG00000003259	RNASEH1	98	51.678	ENSHBUG00000004666	rnaseh1	94	51.678	Haplochromis_burtoni
ENSCAFG00000003259	RNASEH1	100	75.261	ENSHGLG00000002585	Rnaseh1	92	75.261	Heterocephalus_glaber_female
ENSCAFG00000003259	RNASEH1	100	75.261	ENSHGLG00100005105	Rnaseh1	92	75.261	Heterocephalus_glaber_male
ENSCAFG00000003259	RNASEH1	99	50.495	ENSHCOG00000012329	rnaseh1	99	51.974	Hippocampus_comes
ENSCAFG00000003259	RNASEH1	98	54.804	ENSIPUG00000023060	rnaseh1	98	57.364	Ictalurus_punctatus
ENSCAFG00000003259	RNASEH1	98	77.857	ENSSTOG00000012774	RNASEH1	99	78.929	Ictidomys_tridecemlineatus
ENSCAFG00000003259	RNASEH1	100	63.986	ENSJJAG00000008994	-	100	63.986	Jaculus_jaculus
ENSCAFG00000003259	RNASEH1	90	77.132	ENSJJAG00000020238	Rnaseh1	100	77.132	Jaculus_jaculus
ENSCAFG00000003259	RNASEH1	100	72.378	ENSJJAG00000021481	-	100	72.378	Jaculus_jaculus
ENSCAFG00000003259	RNASEH1	89	54.753	ENSKMAG00000001373	rnaseh1	88	54.753	Kryptolebias_marmoratus
ENSCAFG00000003259	RNASEH1	99	52.632	ENSLBEG00000004480	rnaseh1	98	52.982	Labrus_bergylta
ENSCAFG00000003259	RNASEH1	98	52.189	ENSLACG00000007100	RNASEH1	96	53.356	Latimeria_chalumnae
ENSCAFG00000003259	RNASEH1	88	58.427	ENSLOCG00000017212	rnaseh1	96	58.801	Lepisosteus_oculatus
ENSCAFG00000003259	RNASEH1	99	78.671	ENSLAFG00000015091	RNASEH1	99	78.671	Loxodonta_africana
ENSCAFG00000003259	RNASEH1	100	72.125	ENSMFAG00000002323	-	100	72.125	Macaca_fascicularis
ENSCAFG00000003259	RNASEH1	100	80.139	ENSMFAG00000000063	-	100	80.139	Macaca_fascicularis
ENSCAFG00000003259	RNASEH1	100	72.632	ENSMMUG00000019280	-	100	72.632	Macaca_mulatta
ENSCAFG00000003259	RNASEH1	100	79.791	ENSMNEG00000040183	-	100	79.791	Macaca_nemestrina
ENSCAFG00000003259	RNASEH1	100	72.982	ENSMNEG00000029676	-	100	72.982	Macaca_nemestrina
ENSCAFG00000003259	RNASEH1	85	83.539	ENSMLEG00000039352	-	100	83.539	Mandrillus_leucophaeus
ENSCAFG00000003259	RNASEH1	100	74.386	ENSMLEG00000028662	-	100	74.386	Mandrillus_leucophaeus
ENSCAFG00000003259	RNASEH1	99	54.515	ENSMAMG00000019725	rnaseh1	96	54.515	Mastacembelus_armatus
ENSCAFG00000003259	RNASEH1	98	51.000	ENSMZEG00005013006	rnaseh1	94	51.827	Maylandia_zebra
ENSCAFG00000003259	RNASEH1	80	63.265	ENSMGAG00000013979	RNASEH1	99	63.265	Meleagris_gallopavo
ENSCAFG00000003259	RNASEH1	99	76.491	ENSMAUG00000014957	Rnaseh1	99	76.491	Mesocricetus_auratus
ENSCAFG00000003259	RNASEH1	100	83.158	ENSMICG00000033156	RNASEH1	99	83.158	Microcebus_murinus
ENSCAFG00000003259	RNASEH1	100	75.433	ENSMOCG00000015522	Rnaseh1	100	75.433	Microtus_ochrogaster
ENSCAFG00000003259	RNASEH1	98	52.189	ENSMMOG00000015902	rnaseh1	96	52.189	Mola_mola
ENSCAFG00000003259	RNASEH1	80	61.572	ENSMODG00000028814	-	92	61.842	Monodelphis_domestica
ENSCAFG00000003259	RNASEH1	96	70.652	ENSMODG00000014491	-	96	70.652	Monodelphis_domestica
ENSCAFG00000003259	RNASEH1	94	53.497	ENSMALG00000010565	rnaseh1	94	53.497	Monopterus_albus
ENSCAFG00000003259	RNASEH1	100	77.622	MGP_CAROLIEiJ_G0017660	Rnaseh1	100	77.622	Mus_caroli
ENSCAFG00000003259	RNASEH1	100	77.972	ENSMUSG00000020630	Rnaseh1	100	77.972	Mus_musculus
ENSCAFG00000003259	RNASEH1	99	76.491	MGP_PahariEiJ_G0029418	Rnaseh1	99	77.895	Mus_pahari
ENSCAFG00000003259	RNASEH1	100	78.322	MGP_SPRETEiJ_G0018502	Rnaseh1	100	78.322	Mus_spretus
ENSCAFG00000003259	RNASEH1	71	89.655	ENSMPUG00000012984	RNASEH1	99	89.655	Mustela_putorius_furo
ENSCAFG00000003259	RNASEH1	99	78.169	ENSNGAG00000015966	Rnaseh1	90	78.169	Nannospalax_galili
ENSCAFG00000003259	RNASEH1	98	51.667	ENSNBRG00000008739	rnaseh1	94	52.492	Neolamprologus_brichardi
ENSCAFG00000003259	RNASEH1	87	74.194	ENSNLEG00000000059	-	93	74.194	Nomascus_leucogenys
ENSCAFG00000003259	RNASEH1	100	67.474	ENSNLEG00000015400	RNASEH1	100	67.474	Nomascus_leucogenys
ENSCAFG00000003259	RNASEH1	99	47.719	ENSMEUG00000003610	-	100	47.719	Notamacropus_eugenii
ENSCAFG00000003259	RNASEH1	100	72.222	ENSOPRG00000005072	RNASEH1	99	72.222	Ochotona_princeps
ENSCAFG00000003259	RNASEH1	100	78.049	ENSODEG00000000235	Rnaseh1	97	78.049	Octodon_degus
ENSCAFG00000003259	RNASEH1	89	54.244	ENSONIG00000018697	rnaseh1	96	54.244	Oreochromis_niloticus
ENSCAFG00000003259	RNASEH1	100	80.139	ENSOCUG00000006117	RNASEH1	100	80.139	Oryctolagus_cuniculus
ENSCAFG00000003259	RNASEH1	89	56.274	ENSORLG00000018127	rnaseh1	94	56.274	Oryzias_latipes
ENSCAFG00000003259	RNASEH1	98	53.448	ENSORLG00020013660	rnaseh1	95	53.448	Oryzias_latipes_hni
ENSCAFG00000003259	RNASEH1	98	53.448	ENSORLG00015011338	rnaseh1	95	53.448	Oryzias_latipes_hsok
ENSCAFG00000003259	RNASEH1	91	51.493	ENSOMEG00000004710	rnaseh1	98	52.060	Oryzias_melastigma
ENSCAFG00000003259	RNASEH1	100	81.944	ENSOGAG00000017176	RNASEH1	100	81.944	Otolemur_garnettii
ENSCAFG00000003259	RNASEH1	100	69.759	ENSOARG00000005386	RNASEH1	100	69.759	Ovis_aries
ENSCAFG00000003259	RNASEH1	100	81.882	ENSPPAG00000034221	RNASEH1	100	81.882	Pan_paniscus
ENSCAFG00000003259	RNASEH1	100	88.070	ENSPPRG00000015513	RNASEH1	100	88.070	Panthera_pardus
ENSCAFG00000003259	RNASEH1	85	88.797	ENSPTIG00000019034	RNASEH1	85	88.797	Panthera_tigris_altaica
ENSCAFG00000003259	RNASEH1	92	71.269	ENSPTRG00000043403	-	99	71.269	Pan_troglodytes
ENSCAFG00000003259	RNASEH1	100	81.882	ENSPTRG00000011614	RNASEH1	100	81.882	Pan_troglodytes
ENSCAFG00000003259	RNASEH1	100	69.338	ENSPANG00000018246	-	100	69.338	Papio_anubis
ENSCAFG00000003259	RNASEH1	100	79.791	ENSPANG00000000443	RNASEH1	99	83.197	Papio_anubis
ENSCAFG00000003259	RNASEH1	89	50.382	ENSPKIG00000003146	rnaseh1	97	49.434	Paramormyrops_kingsleyae
ENSCAFG00000003259	RNASEH1	89	63.197	ENSPSIG00000002937	RNASEH1	98	63.197	Pelodiscus_sinensis
ENSCAFG00000003259	RNASEH1	98	52.297	ENSPMGG00000017463	rnaseh1	98	52.297	Periophthalmus_magnuspinnatus
ENSCAFG00000003259	RNASEH1	100	74.653	ENSPEMG00000022465	-	100	75.347	Peromyscus_maniculatus_bairdii
ENSCAFG00000003259	RNASEH1	50	45.517	ENSPCIG00000026047	-	79	46.154	Phascolarctos_cinereus
ENSCAFG00000003259	RNASEH1	100	67.944	ENSPCIG00000023334	-	99	67.944	Phascolarctos_cinereus
ENSCAFG00000003259	RNASEH1	98	51.361	ENSPFOG00000002841	rnaseh1	98	51.361	Poecilia_formosa
ENSCAFG00000003259	RNASEH1	79	44.635	ENSPLAG00000021349	-	91	44.635	Poecilia_latipinna
ENSCAFG00000003259	RNASEH1	95	51.712	ENSPMEG00000016826	rnaseh1	98	51.712	Poecilia_mexicana
ENSCAFG00000003259	RNASEH1	98	50.667	ENSPREG00000012197	rnaseh1	98	50.667	Poecilia_reticulata
ENSCAFG00000003259	RNASEH1	100	71.777	ENSPPYG00000025873	RNASEH1	100	71.777	Pongo_abelii
ENSCAFG00000003259	RNASEH1	91	74.809	ENSPPYG00000008067	-	100	74.809	Pongo_abelii
ENSCAFG00000003259	RNASEH1	99	75.352	ENSPCAG00000002500	RNASEH1	99	75.352	Procavia_capensis
ENSCAFG00000003259	RNASEH1	100	76.842	ENSPCOG00000019444	RNASEH1	99	76.842	Propithecus_coquereli
ENSCAFG00000003259	RNASEH1	99	75.439	ENSPVAG00000002070	RNASEH1	99	75.439	Pteropus_vampyrus
ENSCAFG00000003259	RNASEH1	98	50.667	ENSPNYG00000001292	rnaseh1	94	51.495	Pundamilia_nyererei
ENSCAFG00000003259	RNASEH1	91	55.720	ENSPNAG00000022344	rnaseh1	90	55.720	Pygocentrus_nattereri
ENSCAFG00000003259	RNASEH1	99	76.842	ENSRNOG00000008584	Rnaseh1	99	77.544	Rattus_norvegicus
ENSCAFG00000003259	RNASEH1	100	80.139	ENSRBIG00000034222	RNASEH1	99	80.139	Rhinopithecus_bieti
ENSCAFG00000003259	RNASEH1	100	80.139	ENSRROG00000041761	RNASEH1	99	80.139	Rhinopithecus_roxellana
ENSCAFG00000003259	RNASEH1	89	48.936	YMR234W	-	87	48.936	Saccharomyces_cerevisiae
ENSCAFG00000003259	RNASEH1	100	80.412	ENSSBOG00000025411	RNASEH1	100	80.412	Saimiri_boliviensis_boliviensis
ENSCAFG00000003259	RNASEH1	100	68.772	ENSSHAG00000013051	RNASEH1	98	68.772	Sarcophilus_harrisii
ENSCAFG00000003259	RNASEH1	98	50.000	ENSSFOG00015002709	rnaseh1	97	50.357	Scleropages_formosus
ENSCAFG00000003259	RNASEH1	98	51.186	ENSSMAG00000007586	rnaseh1	96	53.242	Scophthalmus_maximus
ENSCAFG00000003259	RNASEH1	98	52.203	ENSSDUG00000008217	rnaseh1	93	55.431	Seriola_dumerili
ENSCAFG00000003259	RNASEH1	87	54.198	ENSSLDG00000000442	rnaseh1	93	56.000	Seriola_lalandi_dorsalis
ENSCAFG00000003259	RNASEH1	89	59.480	ENSSPUG00000006644	RNASEH1	92	59.480	Sphenodon_punctatus
ENSCAFG00000003259	RNASEH1	98	53.741	ENSSPAG00000009353	rnaseh1	96	54.422	Stegastes_partitus
ENSCAFG00000003259	RNASEH1	99	78.169	ENSSSCG00000025305	RNASEH1	99	78.169	Sus_scrofa
ENSCAFG00000003259	RNASEH1	96	57.823	ENSTGUG00000012980	RNASEH1	98	59.122	Taeniopygia_guttata
ENSCAFG00000003259	RNASEH1	98	52.560	ENSTRUG00000015774	rnaseh1	96	54.074	Takifugu_rubripes
ENSCAFG00000003259	RNASEH1	90	56.296	ENSTNIG00000010715	rnaseh1	96	56.296	Tetraodon_nigroviridis
ENSCAFG00000003259	RNASEH1	100	77.003	ENSTTRG00000001615	RNASEH1	100	77.003	Tursiops_truncatus
ENSCAFG00000003259	RNASEH1	54	96.104	ENSUAMG00000018254	RNASEH1	80	96.104	Ursus_americanus
ENSCAFG00000003259	RNASEH1	74	80.717	ENSUMAG00000003941	RNASEH1	74	80.717	Ursus_maritimus
ENSCAFG00000003259	RNASEH1	100	69.338	ENSVPAG00000011589	RNASEH1	100	69.338	Vicugna_pacos
ENSCAFG00000003259	RNASEH1	100	98.947	ENSVVUG00000008633	RNASEH1	90	98.947	Vulpes_vulpes
ENSCAFG00000003259	RNASEH1	93	54.804	ENSXETG00000001212	rnaseh1	95	54.804	Xenopus_tropicalis
ENSCAFG00000003259	RNASEH1	90	44.186	ENSXETG00000030371	-	100	45.098	Xenopus_tropicalis
ENSCAFG00000003259	RNASEH1	98	50.000	ENSXMAG00000002357	rnaseh1	98	50.000	Xiphophorus_maculatus