EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00000003375 (Gene tree)
Gene ID
100856414
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Plus strand
Length
38291 bases
Position
chr17:6537465-6575755
Accession
39575
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000005019CPSF73-100_CPF11718.81.8e-5511
ENSCAFP00000005019Beta-CaspPF10996.84.7e-3411
ENSCAFP00000005019Lactamase_BPF00753.271.1e-1811
ENSCAFP00000005019RMMBLPF07521.121.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000005417-2169XM_003639604ENSCAFP00000005019717 (aa)XP_003639652E2R7R2
Gene Model
Click here to download ENSCAFG00000003375's gene model file
Pathways
Pathway IDPathway NameSource
cfa03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003375's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00000003375CPSF36838.340ENSCAFG00000019287INTS118238.340
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000003375CPSF39599.415ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCAFG00000003375CPSF39585.420ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSCAFG00000003375CPSF37096.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSCAFG00000003375CPSF395100.000ENSAMEG00000008493CPSF3100100.000Ailuropoda_melanoleuca
ENSCAFG00000003375CPSF38782.962ENSACIG00000009846cpsf39982.962Amphilophus_citrinellus
ENSCAFG00000003375CPSF38886.667ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSCAFG00000003375CPSF39585.420ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSCAFG00000003375CPSF39588.235ENSAOCG00000010077CPSF39888.235Amphiprion_ocellaris
ENSCAFG00000003375CPSF39585.567ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSCAFG00000003375CPSF39588.235ENSAPEG00000021167CPSF39888.235Amphiprion_percula
ENSCAFG00000003375CPSF39583.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSCAFG00000003375CPSF39585.567ENSATEG00000003959cpsf39885.567Anabas_testudineus
ENSCAFG00000003375CPSF39495.685ENSAPLG00000006941CPSF39895.685Anas_platyrhynchos
ENSCAFG00000003375CPSF38892.598ENSACAG00000001759CPSF39992.598Anolis_carolinensis
ENSCAFG00000003375CPSF39592.836ENSANAG00000031254CPSF310092.836Aotus_nancymaae
ENSCAFG00000003375CPSF38886.508ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSCAFG00000003375CPSF39385.865ENSACLG00000014484cpsf39985.865Astatotilapia_calliptera
ENSCAFG00000003375CPSF39588.382ENSAMXG00000004786cpsf39888.382Astyanax_mexicanus
ENSCAFG00000003375CPSF39599.854ENSBTAG00000019735CPSF310099.854Bos_taurus
ENSCAFG00000003375CPSF38659.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSCAFG00000003375CPSF39599.415ENSCJAG00000006276CPSF310099.415Callithrix_jacchus
ENSCAFG00000003375CPSF386100.000ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSCAFG00000003375CPSF39599.854ENSCHIG00000013973CPSF310099.854Capra_hircus
ENSCAFG00000003375CPSF39599.415ENSTSYG00000002967CPSF310099.415Carlito_syrichta
ENSCAFG00000003375CPSF39397.901ENSCAPG00000013851CPSF310097.901Cavia_aperea
ENSCAFG00000003375CPSF39597.953ENSCPOG00000011299CPSF310097.953Cavia_porcellus
ENSCAFG00000003375CPSF39599.269ENSCCAG00000036730CPSF310099.269Cebus_capucinus
ENSCAFG00000003375CPSF39596.788ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSCAFG00000003375CPSF39597.807ENSCLAG00000002727CPSF310097.807Chinchilla_lanigera
ENSCAFG00000003375CPSF39591.667ENSCSAG00000007125CPSF310091.667Chlorocebus_sabaeus
ENSCAFG00000003375CPSF382100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSCAFG00000003375CPSF39596.041ENSCPBG00000014074CPSF39996.041Chrysemys_picta_bellii
ENSCAFG00000003375CPSF39567.681ENSCING00000007214-9867.681Ciona_intestinalis
ENSCAFG00000003375CPSF39586.257ENSCANG00000034435CPSF310086.257Colobus_angolensis_palliatus
ENSCAFG00000003375CPSF39599.123ENSCGRG00001013134Cpsf310099.123Cricetulus_griseus_chok1gshd
ENSCAFG00000003375CPSF39599.123ENSCGRG00000018319Cpsf310099.123Cricetulus_griseus_crigri
ENSCAFG00000003375CPSF39686.087ENSCSEG00000002021CPSF39986.708Cynoglossus_semilaevis
ENSCAFG00000003375CPSF39588.529ENSCVAG00000015067CPSF39888.529Cyprinodon_variegatus
ENSCAFG00000003375CPSF39589.118ENSDARG00000027649cpsf39889.118Danio_rerio
ENSCAFG00000003375CPSF39995.531ENSDNOG00000008940CPSF39995.531Dasypus_novemcinctus
ENSCAFG00000003375CPSF39199.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSCAFG00000003375CPSF39467.599FBgn0261065Cpsf739867.599Drosophila_melanogaster
ENSCAFG00000003375CPSF39185.868ENSETEG00000003893CPSF310085.868Echinops_telfairi
ENSCAFG00000003375CPSF39578.797ENSEBUG00000009018cpsf39878.940Eptatretus_burgeri
ENSCAFG00000003375CPSF395100.000ENSEASG00005003970CPSF3100100.000Equus_asinus_asinus
ENSCAFG00000003375CPSF395100.000ENSECAG00000019911CPSF3100100.000Equus_caballus
ENSCAFG00000003375CPSF39584.064ENSEEUG00000015422CPSF310084.064Erinaceus_europaeus
ENSCAFG00000003375CPSF39588.235ENSELUG00000013775cpsf39888.235Esox_lucius
ENSCAFG00000003375CPSF39599.854ENSFCAG00000007852CPSF310099.854Felis_catus
ENSCAFG00000003375CPSF39095.518ENSFALG00000006572CPSF310095.518Ficedula_albicollis
ENSCAFG00000003375CPSF39597.361ENSFDAG00000006317CPSF39997.361Fukomys_damarensis
ENSCAFG00000003375CPSF35669.024ENSFHEG00000012186CPSF39969.024Fundulus_heteroclitus
ENSCAFG00000003375CPSF39585.125ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSCAFG00000003375CPSF39586.765ENSGMOG00000003157cpsf39886.765Gadus_morhua
ENSCAFG00000003375CPSF39595.007ENSGALG00000016424CPSF39995.007Gallus_gallus
ENSCAFG00000003375CPSF39588.513ENSGAFG00000008016CPSF39888.513Gambusia_affinis
ENSCAFG00000003375CPSF38782.989ENSGAFG00000019449cpsf39982.989Gambusia_affinis
ENSCAFG00000003375CPSF36594.218ENSGAGG00000025583CPSF39394.218Gopherus_agassizii
ENSCAFG00000003375CPSF39597.139ENSGGOG00000001757CPSF310099.528Gorilla_gorilla
ENSCAFG00000003375CPSF35681.728ENSHBUG00000014332CPSF39981.728Haplochromis_burtoni
ENSCAFG00000003375CPSF39585.756ENSHBUG00000001188cpsf39985.756Haplochromis_burtoni
ENSCAFG00000003375CPSF39597.076ENSHGLG00000000666CPSF39997.076Heterocephalus_glaber_female
ENSCAFG00000003375CPSF39597.076ENSHGLG00100007765CPSF39997.076Heterocephalus_glaber_male
ENSCAFG00000003375CPSF39586.471ENSHCOG00000015957CPSF39786.471Hippocampus_comes
ENSCAFG00000003375CPSF39684.470ENSHCOG00000007251cpsf39984.470Hippocampus_comes
ENSCAFG00000003375CPSF39587.206ENSIPUG00000023488cpsf39887.206Ictalurus_punctatus
ENSCAFG00000003375CPSF39599.415ENSSTOG00000004476CPSF310099.415Ictidomys_tridecemlineatus
ENSCAFG00000003375CPSF39597.953ENSJJAG00000023415Cpsf310097.953Jaculus_jaculus
ENSCAFG00000003375CPSF39587.794ENSKMAG00000007317CPSF39887.794Kryptolebias_marmoratus
ENSCAFG00000003375CPSF39584.831ENSKMAG00000002806cpsf39884.831Kryptolebias_marmoratus
ENSCAFG00000003375CPSF39089.352ENSLBEG00000013492CPSF39889.352Labrus_bergylta
ENSCAFG00000003375CPSF35280.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSCAFG00000003375CPSF39579.412ENSLBEG00000020569cpsf39479.412Labrus_bergylta
ENSCAFG00000003375CPSF39583.800ENSLACG00000008308CPSF39883.800Latimeria_chalumnae
ENSCAFG00000003375CPSF39589.280ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSCAFG00000003375CPSF39597.941ENSLAFG00000009467CPSF310097.941Loxodonta_africana
ENSCAFG00000003375CPSF39599.415ENSMFAG00000001339CPSF310099.415Macaca_fascicularis
ENSCAFG00000003375CPSF39099.382ENSMMUG00000018038CPSF310099.382Macaca_mulatta
ENSCAFG00000003375CPSF39586.696ENSMNEG00000039447CPSF310086.696Macaca_nemestrina
ENSCAFG00000003375CPSF39599.561ENSMLEG00000026825CPSF310099.561Mandrillus_leucophaeus
ENSCAFG00000003375CPSF38885.443ENSMAMG00000008835CPSF39985.443Mastacembelus_armatus
ENSCAFG00000003375CPSF39585.862ENSMAMG00000003076cpsf39885.862Mastacembelus_armatus
ENSCAFG00000003375CPSF39585.756ENSMZEG00005014358cpsf39985.756Maylandia_zebra
ENSCAFG00000003375CPSF39588.676ENSMZEG00005006258CPSF39888.676Maylandia_zebra
ENSCAFG00000003375CPSF39395.052ENSMGAG00000013995CPSF310095.052Meleagris_gallopavo
ENSCAFG00000003375CPSF35297.606ENSMAUG00000000166Cpsf310097.606Mesocricetus_auratus
ENSCAFG00000003375CPSF39594.152ENSMICG00000002363CPSF310094.152Microcebus_murinus
ENSCAFG00000003375CPSF39594.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSCAFG00000003375CPSF37671.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCAFG00000003375CPSF39082.481ENSMMOG00000018212CPSF39882.481Mola_mola
ENSCAFG00000003375CPSF39596.237ENSMODG00000014703CPSF310096.237Monodelphis_domestica
ENSCAFG00000003375CPSF38883.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSCAFG00000003375CPSF39586.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSCAFG00000003375CPSF39598.830MGP_CAROLIEiJ_G0017640Cpsf310098.830Mus_caroli
ENSCAFG00000003375CPSF39598.830ENSMUSG00000054309Cpsf310098.830Mus_musculus
ENSCAFG00000003375CPSF39598.684MGP_PahariEiJ_G0029397Cpsf310098.684Mus_pahari
ENSCAFG00000003375CPSF39598.830MGP_SPRETEiJ_G0018481Cpsf310098.830Mus_spretus
ENSCAFG00000003375CPSF39599.269ENSMPUG00000013213CPSF310099.269Mustela_putorius_furo
ENSCAFG00000003375CPSF39598.686ENSMLUG00000010636CPSF310098.686Myotis_lucifugus
ENSCAFG00000003375CPSF39598.977ENSNGAG00000019836Cpsf310098.977Nannospalax_galili
ENSCAFG00000003375CPSF38886.508ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSCAFG00000003375CPSF39585.316ENSNBRG00000004770cpsf39985.316Neolamprologus_brichardi
ENSCAFG00000003375CPSF39599.415ENSNLEG00000013359CPSF310099.415Nomascus_leucogenys
ENSCAFG00000003375CPSF39565.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSCAFG00000003375CPSF39590.205ENSOPRG00000008902CPSF310090.205Ochotona_princeps
ENSCAFG00000003375CPSF39597.368ENSODEG00000003129CPSF310097.368Octodon_degus
ENSCAFG00000003375CPSF39585.903ENSONIG00000018812cpsf39985.903Oreochromis_niloticus
ENSCAFG00000003375CPSF37996.631ENSOANG00000008577CPSF310096.631Ornithorhynchus_anatinus
ENSCAFG00000003375CPSF39599.415ENSOCUG00000003728CPSF310099.415Oryctolagus_cuniculus
ENSCAFG00000003375CPSF39683.140ENSORLG00000018854cpsf39983.140Oryzias_latipes
ENSCAFG00000003375CPSF39682.994ENSORLG00020013331cpsf39982.994Oryzias_latipes_hni
ENSCAFG00000003375CPSF39683.140ENSORLG00015011017cpsf39983.140Oryzias_latipes_hsok
ENSCAFG00000003375CPSF39583.847ENSOMEG00000010647cpsf39483.847Oryzias_melastigma
ENSCAFG00000003375CPSF39589.474ENSOGAG00000001680CPSF310089.474Otolemur_garnettii
ENSCAFG00000003375CPSF39599.854ENSOARG00000015073CPSF310099.854Ovis_aries
ENSCAFG00000003375CPSF39599.561ENSPPAG00000042457CPSF310099.561Pan_paniscus
ENSCAFG00000003375CPSF39599.561ENSPPRG00000016790CPSF310099.561Panthera_pardus
ENSCAFG00000003375CPSF39599.559ENSPTIG00000003920CPSF310099.528Panthera_tigris_altaica
ENSCAFG00000003375CPSF39599.561ENSPTRG00000011638CPSF310099.561Pan_troglodytes
ENSCAFG00000003375CPSF39599.269ENSPANG00000016798CPSF310099.269Papio_anubis
ENSCAFG00000003375CPSF39589.706ENSPKIG00000023646cpsf39989.457Paramormyrops_kingsleyae
ENSCAFG00000003375CPSF39594.290ENSPSIG00000016144CPSF310094.290Pelodiscus_sinensis
ENSCAFG00000003375CPSF37985.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSCAFG00000003375CPSF35679.506ENSPMGG00000015311CPSF39979.506Periophthalmus_magnuspinnatus
ENSCAFG00000003375CPSF39598.538ENSPEMG00000017668Cpsf310098.538Peromyscus_maniculatus_bairdii
ENSCAFG00000003375CPSF37490.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSCAFG00000003375CPSF39397.751ENSPCIG00000009823CPSF39897.853Phascolarctos_cinereus
ENSCAFG00000003375CPSF39588.218ENSPFOG00000010418-9888.218Poecilia_formosa
ENSCAFG00000003375CPSF39584.897ENSPFOG00000015922cpsf39984.897Poecilia_formosa
ENSCAFG00000003375CPSF35681.436ENSPLAG00000021300-9981.436Poecilia_latipinna
ENSCAFG00000003375CPSF39584.897ENSPLAG00000000882cpsf39984.897Poecilia_latipinna
ENSCAFG00000003375CPSF39585.044ENSPMEG00000018309cpsf39985.044Poecilia_mexicana
ENSCAFG00000003375CPSF38782.830ENSPREG00000014875cpsf39982.830Poecilia_reticulata
ENSCAFG00000003375CPSF39583.211ENSPREG00000004482CPSF39883.211Poecilia_reticulata
ENSCAFG00000003375CPSF39595.029ENSPPYG00000012666CPSF310095.029Pongo_abelii
ENSCAFG00000003375CPSF39164.209ENSPCAG00000015042CPSF310064.209Procavia_capensis
ENSCAFG00000003375CPSF38492.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSCAFG00000003375CPSF39599.560ENSPVAG00000005324CPSF39999.560Pteropus_vampyrus
ENSCAFG00000003375CPSF37591.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSCAFG00000003375CPSF39585.756ENSPNYG00000004405cpsf39985.756Pundamilia_nyererei
ENSCAFG00000003375CPSF39587.647ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSCAFG00000003375CPSF39598.827ENSRNOG00000052418Cpsf39998.827Rattus_norvegicus
ENSCAFG00000003375CPSF39593.567ENSRBIG00000041615CPSF39994.900Rhinopithecus_bieti
ENSCAFG00000003375CPSF39599.561ENSRROG00000033792CPSF310099.561Rhinopithecus_roxellana
ENSCAFG00000003375CPSF38043.531YLR277CYSH18443.531Saccharomyces_cerevisiae
ENSCAFG00000003375CPSF39593.188ENSSBOG00000027263CPSF310093.188Saimiri_boliviensis_boliviensis
ENSCAFG00000003375CPSF39597.953ENSSHAG00000007024CPSF310097.953Sarcophilus_harrisii
ENSCAFG00000003375CPSF39589.721ENSSFOG00015002108cpsf39989.721Scleropages_formosus
ENSCAFG00000003375CPSF39187.692ENSSMAG00000020534CPSF39687.692Scophthalmus_maximus
ENSCAFG00000003375CPSF39585.903ENSSDUG00000002828cpsf39685.903Seriola_dumerili
ENSCAFG00000003375CPSF39588.382ENSSDUG00000018498CPSF39888.382Seriola_dumerili
ENSCAFG00000003375CPSF39585.903ENSSLDG00000008469cpsf39685.903Seriola_lalandi_dorsalis
ENSCAFG00000003375CPSF39588.382ENSSLDG00000005234CPSF39888.382Seriola_lalandi_dorsalis
ENSCAFG00000003375CPSF39581.579ENSSARG00000005186CPSF310081.579Sorex_araneus
ENSCAFG00000003375CPSF39392.846ENSSPUG00000015525CPSF39792.846Sphenodon_punctatus
ENSCAFG00000003375CPSF39588.088ENSSPAG00000002906CPSF39888.088Stegastes_partitus
ENSCAFG00000003375CPSF39585.567ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSCAFG00000003375CPSF39599.854ENSSSCG00000020799CPSF39999.854Sus_scrofa
ENSCAFG00000003375CPSF39595.595ENSTGUG00000013016CPSF39995.595Taeniopygia_guttata
ENSCAFG00000003375CPSF35673.219ENSTRUG00000013905CPSF39973.219Takifugu_rubripes
ENSCAFG00000003375CPSF39585.294ENSTRUG00000007030cpsf39785.294Takifugu_rubripes
ENSCAFG00000003375CPSF38193.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSCAFG00000003375CPSF38499.462ENSTTRG00000000861CPSF38899.462Tursiops_truncatus
ENSCAFG00000003375CPSF392100.000ENSUAMG00000007535CPSF394100.000Ursus_americanus
ENSCAFG00000003375CPSF390100.000ENSUMAG00000003676CPSF3100100.000Ursus_maritimus
ENSCAFG00000003375CPSF38896.057ENSVPAG00000008041CPSF310096.057Vicugna_pacos
ENSCAFG00000003375CPSF395100.000ENSVVUG00000002194CPSF3100100.000Vulpes_vulpes
ENSCAFG00000003375CPSF39590.015ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSCAFG00000003375CPSF39585.191ENSXCOG00000019695cpsf39985.191Xiphophorus_couchianus
ENSCAFG00000003375CPSF35280.054ENSXCOG00000000957-8780.054Xiphophorus_couchianus
ENSCAFG00000003375CPSF39584.897ENSXMAG00000009784cpsf39984.897Xiphophorus_maculatus
ENSCAFG00000003375CPSF39588.365ENSXMAG00000027291CPSF39888.365Xiphophorus_maculatus

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