EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000003391 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 607 bases
Position: chr16:10277099-10277705
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000005040	Ribosomal_L23	PF00276.20	3.8e-11	1	1
ENSCAFP00000005040	Ribosomal_L23eN	PF03939.13	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000005439	-	465	-	ENSCAFP00000005040	154 (aa)	-	F1PFY8

Gene Model

Click here to download ENSCAFG00000003391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000003391	-	78	57.377	ENSCAFG00000005724	-	97	55.000
ENSCAFG00000003391	-	100	44.654	ENSCAFG00000014107	-	96	46.795
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000001968	-	96	66.026
ENSCAFG00000003391	-	76	56.303	ENSCAFG00000003047	-	96	57.051
ENSCAFG00000003391	-	99	56.688	ENSCAFG00000017678	-	95	56.688
ENSCAFG00000003391	-	67	63.810	ENSCAFG00000017753	-	96	58.974
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000018784	-	96	66.026
ENSCAFG00000003391	-	58	64.130	ENSCAFG00000009706	-	95	49.032
ENSCAFG00000003391	-	77	61.983	ENSCAFG00000007256	-	96	60.256
ENSCAFG00000003391	-	69	61.111	ENSCAFG00000030594	-	94	58.333
ENSCAFG00000003391	-	75	61.864	ENSCAFG00000003753	-	94	60.645
ENSCAFG00000003391	-	76	61.017	ENSCAFG00000018232	-	96	58.065
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000002548	-	96	66.026
ENSCAFG00000003391	-	100	43.949	ENSCAFG00000006700	-	96	43.949
ENSCAFG00000003391	-	76	68.644	ENSCAFG00000024043	-	96	66.452
ENSCAFG00000003391	-	82	64.615	ENSCAFG00000000014	-	96	63.694
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000024427	-	93	64.238
ENSCAFG00000003391	-	99	50.000	ENSCAFG00000003274	-	95	50.000
ENSCAFG00000003391	-	76	67.797	ENSCAFG00000020044	-	96	66.452
ENSCAFG00000003391	-	100	87.179	ENSCAFG00000015308	-	100	87.179
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000016268	-	96	66.026
ENSCAFG00000003391	-	99	48.718	ENSCAFG00000003985	-	97	48.718
ENSCAFG00000003391	-	75	63.248	ENSCAFG00000004370	-	95	62.179
ENSCAFG00000003391	-	62	61.458	ENSCAFG00000001011	-	95	53.750
ENSCAFG00000003391	-	76	63.025	ENSCAFG00000031555	-	96	61.538
ENSCAFG00000003391	-	69	52.778	ENSCAFG00000004716	-	95	48.052
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000031731	-	96	66.026
ENSCAFG00000003391	-	68	67.290	ENSCAFG00000004933	-	99	60.000
ENSCAFG00000003391	-	94	53.741	ENSCAFG00000019297	-	98	55.844
ENSCAFG00000003391	-	76	58.824	ENSCAFG00000017449	-	97	55.769
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000015394	-	96	66.026
ENSCAFG00000003391	-	76	68.067	ENSCAFG00000004003	-	99	65.385
ENSCAFG00000003391	-	76	65.254	ENSCAFG00000030051	-	96	61.290
ENSCAFG00000003391	-	76	60.169	ENSCAFG00000002410	-	96	59.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000003391	-	99	50.649	ENSAMEG00000005208	-	95	50.649	Ailuropoda_melanoleuca
ENSCAFG00000003391	-	60	64.894	ENSCGRG00001011003	-	96	53.205	Cricetulus_griseus_chok1gshd
ENSCAFG00000003391	-	60	64.894	ENSCGRG00000019420	-	96	53.205	Cricetulus_griseus_crigri
ENSCAFG00000003391	-	100	47.742	ENSDNOG00000039276	-	94	47.742	Dasypus_novemcinctus
ENSCAFG00000003391	-	99	51.948	ENSDNOG00000041286	-	95	51.948	Dasypus_novemcinctus
ENSCAFG00000003391	-	61	45.263	MGP_CAROLIEiJ_G0018758	-	79	45.263	Mus_caroli
ENSCAFG00000003391	-	61	46.316	MGP_SPRETEiJ_G0019641	-	79	46.316	Mus_spretus
ENSCAFG00000003391	-	100	49.682	ENSOCUG00000021843	-	96	49.682	Oryctolagus_cuniculus