EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000003711 (Gene tree)
Gene ID: 484388
Gene Symbol: SNRNP70
Alias: -
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 15871 bases
Position: chr1:107340658-107356528
Accession: 46609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000005531	RRM_1	PF00076.22	5e-18	1	1
ENSCAFP00000038609	RRM_1	PF00076.22	1.1e-13	1	1
ENSCAFP00000038609	U1snRNP70_N	PF12220.8	6.7e-29	1	1
ENSCAFP00000005531	U1snRNP70_N	PF12220.8	9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000005969	-	1320	XM_005616329	ENSCAFP00000005531	439 (aa)	XP_005616386	F6V5G7
ENSCAFT00000045168	-	975	-	ENSCAFP00000038609	166 (aa)	-	J9NZ89

Gene Model

Click here to download ENSCAFG00000003711's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000003711	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSCAFG00000003711	SNRNP70	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSCAFG00000003711	SNRNP70	100	97.500	ENSAMEG00000014468	SNRNP70	100	97.500	Ailuropoda_melanoleuca
ENSCAFG00000003711	SNRNP70	99	89.634	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSCAFG00000003711	SNRNP70	99	93.902	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSCAFG00000003711	SNRNP70	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSCAFG00000003711	SNRNP70	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSCAFG00000003711	SNRNP70	99	50.303	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSCAFG00000003711	SNRNP70	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSCAFG00000003711	SNRNP70	100	98.413	ENSCAFG00020025470	SNRNP70	100	98.413	Canis_lupus_dingo
ENSCAFG00000003711	SNRNP70	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSCAFG00000003711	SNRNP70	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSCAFG00000003711	SNRNP70	100	98.182	ENSCPOG00000019589	SNRNP70	100	98.182	Cavia_porcellus
ENSCAFG00000003711	SNRNP70	89	97.704	ENSCCAG00000036551	SNRNP70	100	97.704	Cebus_capucinus
ENSCAFG00000003711	SNRNP70	100	97.959	ENSCATG00000016149	SNRNP70	100	97.959	Cercocebus_atys
ENSCAFG00000003711	SNRNP70	100	98.405	ENSCLAG00000007991	SNRNP70	100	98.405	Chinchilla_lanigera
ENSCAFG00000003711	SNRNP70	99	97.561	ENSCSAG00000002759	SNRNP70	100	95.918	Chlorocebus_sabaeus
ENSCAFG00000003711	SNRNP70	99	96.341	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSCAFG00000003711	SNRNP70	96	66.875	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSCAFG00000003711	SNRNP70	100	97.738	ENSCANG00000036607	SNRNP70	99	99.187	Colobus_angolensis_palliatus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSCGRG00001020676	Snrnp70	100	96.404	Cricetulus_griseus_chok1gshd
ENSCAFG00000003711	SNRNP70	99	97.561	ENSCGRG00000018048	Snrnp70	100	96.404	Cricetulus_griseus_crigri
ENSCAFG00000003711	SNRNP70	99	88.415	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSCAFG00000003711	SNRNP70	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSCAFG00000003711	SNRNP70	99	86.585	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSCAFG00000003711	SNRNP70	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSCAFG00000003711	SNRNP70	100	97.511	ENSDORG00000010228	Snrnp70	100	97.511	Dipodomys_ordii
ENSCAFG00000003711	SNRNP70	53	100.000	ENSETEG00000005009	SNRNP70	74	100.000	Echinops_telfairi
ENSCAFG00000003711	SNRNP70	100	99.089	ENSEASG00005004917	SNRNP70	100	99.089	Equus_asinus_asinus
ENSCAFG00000003711	SNRNP70	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSCAFG00000003711	SNRNP70	100	83.864	ENSEEUG00000005666	SNRNP70	100	80.000	Erinaceus_europaeus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSFCAG00000042603	SNRNP70	100	93.166	Felis_catus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSFDAG00000013830	SNRNP70	95	97.531	Fukomys_damarensis
ENSCAFG00000003711	SNRNP70	99	87.805	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSCAFG00000003711	SNRNP70	99	88.415	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSCAFG00000003711	SNRNP70	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSCAFG00000003711	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSCAFG00000003711	SNRNP70	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSCAFG00000003711	SNRNP70	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSCAFG00000003711	SNRNP70	100	96.622	ENSJJAG00000002614	Snrnp70	100	96.622	Jaculus_jaculus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSCAFG00000003711	SNRNP70	100	97.959	ENSMFAG00000039824	SNRNP70	100	97.959	Macaca_fascicularis
ENSCAFG00000003711	SNRNP70	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSCAFG00000003711	SNRNP70	99	97.561	ENSMNEG00000038057	SNRNP70	100	95.465	Macaca_nemestrina
ENSCAFG00000003711	SNRNP70	100	97.959	ENSMLEG00000030967	SNRNP70	100	97.959	Mandrillus_leucophaeus
ENSCAFG00000003711	SNRNP70	100	96.622	ENSMAUG00000020970	Snrnp70	100	96.622	Mesocricetus_auratus
ENSCAFG00000003711	SNRNP70	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSMOCG00000012825	Snrnp70	100	95.749	Microtus_ochrogaster
ENSCAFG00000003711	SNRNP70	75	81.899	ENSMODG00000023381	SNRNP70	100	72.321	Monodelphis_domestica
ENSCAFG00000003711	SNRNP70	99	97.561	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSCAFG00000003711	SNRNP70	99	97.561	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSCAFG00000003711	SNRNP70	99	97.561	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSCAFG00000003711	SNRNP70	99	97.561	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSCAFG00000003711	SNRNP70	100	99.772	ENSMPUG00000003258	SNRNP70	100	99.772	Mustela_putorius_furo
ENSCAFG00000003711	SNRNP70	100	98.861	ENSMLUG00000011766	SNRNP70	100	98.861	Myotis_lucifugus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSNGAG00000021191	Snrnp70	100	95.089	Nannospalax_galili
ENSCAFG00000003711	SNRNP70	99	89.024	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSCAFG00000003711	SNRNP70	99	97.931	ENSNLEG00000004899	SNRNP70	100	97.931	Nomascus_leucogenys
ENSCAFG00000003711	SNRNP70	99	97.561	ENSODEG00000017499	SNRNP70	100	94.348	Octodon_degus
ENSCAFG00000003711	SNRNP70	99	88.415	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSCAFG00000003711	SNRNP70	99	96.951	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSOCUG00000015081	SNRNP70	50	100.000	Oryctolagus_cuniculus
ENSCAFG00000003711	SNRNP70	100	99.091	ENSOGAG00000029310	SNRNP70	100	99.091	Otolemur_garnettii
ENSCAFG00000003711	SNRNP70	99	97.561	ENSOARG00000012608	SNRNP70	93	100.000	Ovis_aries
ENSCAFG00000003711	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSCAFG00000003711	SNRNP70	100	99.772	ENSPPRG00000005579	SNRNP70	100	99.772	Panthera_pardus
ENSCAFG00000003711	SNRNP70	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSCAFG00000003711	SNRNP70	100	97.959	ENSPANG00000004068	SNRNP70	100	97.959	Papio_anubis
ENSCAFG00000003711	SNRNP70	96	80.503	ENSPKIG00000019992	snrnp70	86	79.012	Paramormyrops_kingsleyae
ENSCAFG00000003711	SNRNP70	98	96.296	ENSPSIG00000015251	SNRNP70	90	85.217	Pelodiscus_sinensis
ENSCAFG00000003711	SNRNP70	96	90.566	ENSPMGG00000010153	snrnp70	77	90.062	Periophthalmus_magnuspinnatus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSPEMG00000019011	Snrnp70	100	95.759	Peromyscus_maniculatus_bairdii
ENSCAFG00000003711	SNRNP70	99	79.878	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSCAFG00000003711	SNRNP70	99	97.561	ENSPCIG00000007296	SNRNP70	52	100.000	Phascolarctos_cinereus
ENSCAFG00000003711	SNRNP70	100	97.506	ENSPPYG00000010234	SNRNP70	100	97.506	Pongo_abelii
ENSCAFG00000003711	SNRNP70	99	85.976	ENSPCOG00000023103	SNRNP70	82	91.739	Propithecus_coquereli
ENSCAFG00000003711	SNRNP70	100	95.444	ENSPVAG00000009578	SNRNP70	100	95.444	Pteropus_vampyrus
ENSCAFG00000003711	SNRNP70	100	97.732	ENSRBIG00000042387	SNRNP70	100	97.732	Rhinopithecus_bieti
ENSCAFG00000003711	SNRNP70	100	97.959	ENSRROG00000033636	SNRNP70	100	97.959	Rhinopithecus_roxellana
ENSCAFG00000003711	SNRNP70	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00000003711	SNRNP70	99	97.561	ENSSHAG00000002194	SNRNP70	52	100.000	Sarcophilus_harrisii
ENSCAFG00000003711	SNRNP70	100	94.578	ENSSPUG00000016621	SNRNP70	52	98.649	Sphenodon_punctatus
ENSCAFG00000003711	SNRNP70	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSCAFG00000003711	SNRNP70	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSCAFG00000003711	SNRNP70	100	97.955	ENSTTRG00000017099	SNRNP70	100	97.955	Tursiops_truncatus
ENSCAFG00000003711	SNRNP70	100	99.772	ENSUAMG00000016147	SNRNP70	100	99.772	Ursus_americanus
ENSCAFG00000003711	SNRNP70	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSCAFG00000003711	SNRNP70	79	99.237	ENSVPAG00000005959	-	100	80.995	Vicugna_pacos
ENSCAFG00000003711	SNRNP70	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes
ENSCAFG00000003711	SNRNP70	99	93.293	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis