EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000003831 (Gene tree)
Gene ID: 476085
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 123089 bases
Position: chr19:12771878-12894966
Accession: 42588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000005714	La	PF05383.17	9.4e-22	1	1
ENSCAFP00000042167	La	PF05383.17	9.5e-22	1	1
ENSCAFP00000005723	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000045950	-	7015	XM_005631809	ENSCAFP00000042167	919 (aa)	XP_005631866	J9P8T6
ENSCAFT00000006170	-	2751	-	ENSCAFP00000005714	917 (aa)	-	F1PAR4
ENSCAFT00000006179	-	2469	-	ENSCAFP00000005723	823 (aa)	-	E2RT58

Gene Model

Click here to download ENSCAFG00000003831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000003831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000003831	LARP1B	99	66.445	ENSCAFG00000017639	LARP1	93	61.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000003831	LARP1B	100	90.949	ENSG00000138709	LARP1B	96	95.833	Homo_sapiens
ENSCAFG00000003831	LARP1B	99	59.602	ENSAPOG00000020101	larp1b	83	59.836	Acanthochromis_polyacanthus
ENSCAFG00000003831	LARP1B	60	97.273	ENSAMEG00000002748	LARP1B	100	96.745	Ailuropoda_melanoleuca
ENSCAFG00000003831	LARP1B	98	59.647	ENSACIG00000023890	larp1b	81	59.272	Amphilophus_citrinellus
ENSCAFG00000003831	LARP1B	89	59.173	ENSAOCG00000014268	larp1b	85	59.948	Amphiprion_ocellaris
ENSCAFG00000003831	LARP1B	99	60.211	ENSAPEG00000004126	larp1b	85	57.844	Amphiprion_percula
ENSCAFG00000003831	LARP1B	99	58.440	ENSATEG00000017849	larp1b	86	56.978	Anabas_testudineus
ENSCAFG00000003831	LARP1B	98	73.670	ENSAPLG00000010129	LARP1B	98	70.615	Anas_platyrhynchos
ENSCAFG00000003831	LARP1B	93	77.778	ENSACAG00000011338	LARP1B	86	78.835	Anolis_carolinensis
ENSCAFG00000003831	LARP1B	98	71.460	ENSANAG00000034618	LARP1B	97	84.375	Aotus_nancymaae
ENSCAFG00000003831	LARP1B	100	54.576	ENSACLG00000011948	larp1b	85	55.916	Astatotilapia_calliptera
ENSCAFG00000003831	LARP1B	99	55.156	ENSAMXG00000006805	larp1b	81	57.388	Astyanax_mexicanus
ENSCAFG00000003831	LARP1B	100	92.500	ENSBTAG00000012135	LARP1B	98	91.813	Bos_taurus
ENSCAFG00000003831	LARP1B	100	89.858	ENSCJAG00000003338	LARP1B	99	91.766	Callithrix_jacchus
ENSCAFG00000003831	LARP1B	100	98.711	ENSCAFG00020018899	LARP1B	100	98.711	Canis_lupus_dingo
ENSCAFG00000003831	LARP1B	100	91.176	ENSCHIG00000023144	LARP1B	100	91.066	Capra_hircus
ENSCAFG00000003831	LARP1B	100	90.403	ENSCCAG00000021948	LARP1B	98	93.313	Cebus_capucinus
ENSCAFG00000003831	LARP1B	100	90.185	ENSCATG00000013541	LARP1B	100	90.185	Cercocebus_atys
ENSCAFG00000003831	LARP1B	100	91.712	ENSCSAG00000003582	LARP1B	100	91.712	Chlorocebus_sabaeus
ENSCAFG00000003831	LARP1B	100	82.462	ENSCHOG00000005354	LARP1B	100	82.879	Choloepus_hoffmanni
ENSCAFG00000003831	LARP1B	99	78.370	ENSCPBG00000017480	LARP1B	87	78.804	Chrysemys_picta_bellii
ENSCAFG00000003831	LARP1B	100	86.805	ENSCANG00000026958	LARP1B	98	92.606	Colobus_angolensis_palliatus
ENSCAFG00000003831	LARP1B	96	54.780	ENSCSEG00000013519	larp1b	79	62.533	Cynoglossus_semilaevis
ENSCAFG00000003831	LARP1B	99	58.087	ENSCVAG00000005046	larp1b	83	58.931	Cyprinodon_variegatus
ENSCAFG00000003831	LARP1B	100	57.816	ENSDARG00000061169	larp1b	80	59.450	Danio_rerio
ENSCAFG00000003831	LARP1B	56	90.643	ENSDNOG00000018765	-	99	90.980	Dasypus_novemcinctus
ENSCAFG00000003831	LARP1B	88	82.353	ENSETEG00000012497	LARP1B	89	82.353	Echinops_telfairi
ENSCAFG00000003831	LARP1B	98	49.083	ENSEBUG00000003668	larp1b	90	50.269	Eptatretus_burgeri
ENSCAFG00000003831	LARP1B	100	92.366	ENSEASG00005018106	LARP1B	98	97.887	Equus_asinus_asinus
ENSCAFG00000003831	LARP1B	100	92.818	ENSECAG00000001088	LARP1B	82	92.818	Equus_caballus
ENSCAFG00000003831	LARP1B	73	56.940	ENSELUG00000023774	larp1b	82	52.019	Esox_lucius
ENSCAFG00000003831	LARP1B	56	95.117	ENSFCAG00000014650	-	98	96.657	Felis_catus
ENSCAFG00000003831	LARP1B	100	69.306	ENSFALG00000008098	LARP1B	100	68.697	Ficedula_albicollis
ENSCAFG00000003831	LARP1B	99	60.140	ENSFHEG00000010264	larp1b	79	60.140	Fundulus_heteroclitus
ENSCAFG00000003831	LARP1B	87	70.741	ENSGMOG00000005207	larp1b	70	71.111	Gadus_morhua
ENSCAFG00000003831	LARP1B	100	69.066	ENSGALG00000010207	LARP1B	87	71.381	Gallus_gallus
ENSCAFG00000003831	LARP1B	90	60.660	ENSGAFG00000012012	larp1b	98	59.459	Gambusia_affinis
ENSCAFG00000003831	LARP1B	92	60.313	ENSGACG00000004609	larp1b	85	54.631	Gasterosteus_aculeatus
ENSCAFG00000003831	LARP1B	100	78.463	ENSGAGG00000017209	LARP1B	87	78.896	Gopherus_agassizii
ENSCAFG00000003831	LARP1B	100	91.058	ENSGGOG00000015900	LARP1B	100	91.058	Gorilla_gorilla
ENSCAFG00000003831	LARP1B	100	59.555	ENSHBUG00000009730	larp1b	82	59.555	Haplochromis_burtoni
ENSCAFG00000003831	LARP1B	79	63.213	ENSHCOG00000000918	larp1b	95	63.964	Hippocampus_comes
ENSCAFG00000003831	LARP1B	99	59.793	ENSIPUG00000012138	larp1b	80	60.484	Ictalurus_punctatus
ENSCAFG00000003831	LARP1B	99	57.932	ENSKMAG00000011589	larp1b	85	58.968	Kryptolebias_marmoratus
ENSCAFG00000003831	LARP1B	99	59.022	ENSLBEG00000005655	larp1b	83	59.579	Labrus_bergylta
ENSCAFG00000003831	LARP1B	99	72.618	ENSLACG00000015247	LARP1B	100	70.738	Latimeria_chalumnae
ENSCAFG00000003831	LARP1B	99	73.001	ENSLOCG00000010684	larp1b	88	73.001	Lepisosteus_oculatus
ENSCAFG00000003831	LARP1B	100	91.494	ENSMFAG00000002218	LARP1B	100	91.494	Macaca_fascicularis
ENSCAFG00000003831	LARP1B	100	91.712	ENSMMUG00000021347	LARP1B	100	91.712	Macaca_mulatta
ENSCAFG00000003831	LARP1B	91	89.415	ENSMNEG00000030406	LARP1B	100	89.415	Macaca_nemestrina
ENSCAFG00000003831	LARP1B	100	87.677	ENSMLEG00000009306	LARP1B	100	87.895	Mandrillus_leucophaeus
ENSCAFG00000003831	LARP1B	99	60.234	ENSMAMG00000000081	larp1b	84	60.702	Mastacembelus_armatus
ENSCAFG00000003831	LARP1B	80	65.414	ENSMZEG00005002545	larp1b	98	60.660	Maylandia_zebra
ENSCAFG00000003831	LARP1B	97	67.160	ENSMGAG00000004809	LARP1B	98	65.432	Meleagris_gallopavo
ENSCAFG00000003831	LARP1B	55	69.745	ENSMICG00000028052	-	99	69.745	Microcebus_murinus
ENSCAFG00000003831	LARP1B	100	93.457	ENSMICG00000036111	LARP1B	100	95.022	Microcebus_murinus
ENSCAFG00000003831	LARP1B	100	86.325	ENSMODG00000012300	LARP1B	83	86.966	Monodelphis_domestica
ENSCAFG00000003831	LARP1B	99	59.719	ENSMALG00000003638	larp1b	87	57.447	Monopterus_albus
ENSCAFG00000003831	LARP1B	100	96.409	ENSMPUG00000017365	LARP1B	83	96.409	Mustela_putorius_furo
ENSCAFG00000003831	LARP1B	100	88.391	ENSMLUG00000010229	LARP1B	97	86.429	Myotis_lucifugus
ENSCAFG00000003831	LARP1B	84	59.549	ENSNBRG00000023846	larp1b	83	54.612	Neolamprologus_brichardi
ENSCAFG00000003831	LARP1B	100	90.305	ENSNLEG00000013819	LARP1B	100	90.305	Nomascus_leucogenys
ENSCAFG00000003831	LARP1B	87	82.081	ENSMEUG00000010308	LARP1B	88	82.081	Notamacropus_eugenii
ENSCAFG00000003831	LARP1B	99	71.786	ENSOPRG00000005478	LARP1B	100	72.162	Ochotona_princeps
ENSCAFG00000003831	LARP1B	97	56.223	ENSONIG00000012386	larp1b	96	54.604	Oreochromis_niloticus
ENSCAFG00000003831	LARP1B	100	91.077	ENSOCUG00000013330	LARP1B	100	91.077	Oryctolagus_cuniculus
ENSCAFG00000003831	LARP1B	99	58.499	ENSORLG00000017954	larp1b	82	58.920	Oryzias_latipes
ENSCAFG00000003831	LARP1B	99	55.885	ENSORLG00020013081	larp1b	84	56.263	Oryzias_latipes_hni
ENSCAFG00000003831	LARP1B	99	59.647	ENSORLG00015009580	larp1b	82	59.647	Oryzias_latipes_hsok
ENSCAFG00000003831	LARP1B	99	59.412	ENSOMEG00000004210	larp1b	82	60.047	Oryzias_melastigma
ENSCAFG00000003831	LARP1B	96	90.080	ENSOGAG00000005771	LARP1B	98	91.194	Otolemur_garnettii
ENSCAFG00000003831	LARP1B	100	91.068	ENSOARG00000015300	LARP1B	100	91.068	Ovis_aries
ENSCAFG00000003831	LARP1B	100	90.949	ENSPPAG00000030439	LARP1B	100	90.949	Pan_paniscus
ENSCAFG00000003831	LARP1B	56	95.312	ENSPPRG00000002743	-	98	96.657	Panthera_pardus
ENSCAFG00000003831	LARP1B	56	95.312	ENSPTIG00000011225	LARP1B	98	96.657	Panthera_tigris_altaica
ENSCAFG00000003831	LARP1B	100	90.949	ENSPTRG00000016437	LARP1B	100	90.949	Pan_troglodytes
ENSCAFG00000003831	LARP1B	100	91.603	ENSPANG00000012488	LARP1B	100	91.603	Papio_anubis
ENSCAFG00000003831	LARP1B	99	54.492	ENSPKIG00000014360	larp1b	91	54.816	Paramormyrops_kingsleyae
ENSCAFG00000003831	LARP1B	96	78.888	ENSPSIG00000012885	LARP1B	93	80.738	Pelodiscus_sinensis
ENSCAFG00000003831	LARP1B	80	65.060	ENSPMGG00000007207	larp1b	91	60.948	Periophthalmus_magnuspinnatus
ENSCAFG00000003831	LARP1B	94	50.717	ENSPMAG00000002700	larp1b	97	53.838	Petromyzon_marinus
ENSCAFG00000003831	LARP1B	100	85.225	ENSPCIG00000026516	LARP1B	100	88.079	Phascolarctos_cinereus
ENSCAFG00000003831	LARP1B	56	52.190	ENSPFOG00000022837	-	78	52.564	Poecilia_formosa
ENSCAFG00000003831	LARP1B	100	56.275	ENSPFOG00000019519	larp1b	86	56.174	Poecilia_formosa
ENSCAFG00000003831	LARP1B	100	57.648	ENSPLAG00000007115	larp1b	86	57.648	Poecilia_latipinna
ENSCAFG00000003831	LARP1B	99	60.844	ENSPMEG00000001224	larp1b	86	57.321	Poecilia_mexicana
ENSCAFG00000003831	LARP1B	100	86.914	ENSPCAG00000007546	LARP1B	100	86.681	Procavia_capensis
ENSCAFG00000003831	LARP1B	89	93.793	ENSPCOG00000021874	LARP1B	99	93.836	Propithecus_coquereli
ENSCAFG00000003831	LARP1B	100	85.714	ENSPVAG00000005373	LARP1B	100	87.168	Pteropus_vampyrus
ENSCAFG00000003831	LARP1B	80	63.811	ENSPNYG00000017357	larp1b	98	60.279	Pundamilia_nyererei
ENSCAFG00000003831	LARP1B	99	57.469	ENSPNAG00000008823	larp1b	81	61.105	Pygocentrus_nattereri
ENSCAFG00000003831	LARP1B	56	89.453	ENSRBIG00000039982	-	98	90.881	Rhinopithecus_bieti
ENSCAFG00000003831	LARP1B	100	91.276	ENSRROG00000030771	LARP1B	100	91.276	Rhinopithecus_roxellana
ENSCAFG00000003831	LARP1B	73	85.417	ENSSHAG00000014474	LARP1B	99	86.248	Sarcophilus_harrisii
ENSCAFG00000003831	LARP1B	99	57.159	ENSSMAG00000006347	larp1b	93	55.450	Scophthalmus_maximus
ENSCAFG00000003831	LARP1B	100	60.329	ENSSDUG00000004182	larp1b	82	60.446	Seriola_dumerili
ENSCAFG00000003831	LARP1B	100	57.678	ENSSLDG00000014613	larp1b	81	57.195	Seriola_lalandi_dorsalis
ENSCAFG00000003831	LARP1B	97	70.146	ENSSPUG00000011837	LARP1B	99	69.360	Sphenodon_punctatus
ENSCAFG00000003831	LARP1B	99	58.119	ENSSPAG00000017772	larp1b	86	56.490	Stegastes_partitus
ENSCAFG00000003831	LARP1B	100	91.186	ENSSSCG00000034280	LARP1B	99	94.845	Sus_scrofa
ENSCAFG00000003831	LARP1B	95	72.613	ENSTGUG00000002098	-	95	72.613	Taeniopygia_guttata
ENSCAFG00000003831	LARP1B	94	63.425	ENSTRUG00000005612	larp1b	82	58.118	Takifugu_rubripes
ENSCAFG00000003831	LARP1B	100	60.240	ENSTNIG00000012398	larp1b	91	60.628	Tetraodon_nigroviridis
ENSCAFG00000003831	LARP1B	87	87.619	ENSTBEG00000004177	LARP1B	88	87.619	Tupaia_belangeri
ENSCAFG00000003831	LARP1B	100	81.917	ENSTTRG00000012984	LARP1B	100	82.186	Tursiops_truncatus
ENSCAFG00000003831	LARP1B	100	96.083	ENSUMAG00000007373	LARP1B	100	96.083	Ursus_maritimus
ENSCAFG00000003831	LARP1B	91	91.781	ENSVPAG00000007223	LARP1B	100	80.617	Vicugna_pacos
ENSCAFG00000003831	LARP1B	100	99.674	ENSVVUG00000011307	LARP1B	100	99.674	Vulpes_vulpes
ENSCAFG00000003831	LARP1B	99	61.330	ENSXETG00000022512	larp1b	89	61.002	Xenopus_tropicalis
ENSCAFG00000003831	LARP1B	75	63.492	ENSXCOG00000004435	larp1b	73	59.801	Xiphophorus_couchianus
ENSCAFG00000003831	LARP1B	99	58.977	ENSXMAG00000008150	larp1b	85	57.143	Xiphophorus_maculatus