EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00000004179 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
-
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Plus strand
Length
174981 bases
Position
chr19:19150610-19325590
Accession
54812
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6019
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6029
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6039
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6049
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6059
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6069
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6079
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6089
ENSCAFP00000006212zf-C2H2PF00096.268.2e-6099
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4218
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4228
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4238
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4248
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4258
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4268
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4278
ENSCAFP00000039839zf-C2H2PF00096.261.1e-4288
ENSCAFP00000006212zf-metPF12874.71.4e-2414
ENSCAFP00000006212zf-metPF12874.71.4e-2424
ENSCAFP00000006212zf-metPF12874.71.4e-2434
ENSCAFP00000006212zf-metPF12874.71.4e-2444
ENSCAFP00000039839zf-metPF12874.78.8e-2314
ENSCAFP00000039839zf-metPF12874.78.8e-2324
ENSCAFP00000039839zf-metPF12874.78.8e-2334
ENSCAFP00000039839zf-metPF12874.78.8e-2344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000043900-1350-ENSCAFP00000039839450 (aa)-J9P2R1
ENSCAFT00000048175-510-ENSCAFP0000004258869 (aa)-J9PA05
ENSCAFT00000006708-1743-ENSCAFP00000006212580 (aa)-E2RSL4
Gene Model
Click here to download ENSCAFG00000004179's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000004179's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00000004179PRDM58034.107ENSCAFG00000030057ZNF2348637.304
ENSCAFG00000004179PRDM57538.272ENSCAFG00000002561-9635.577
ENSCAFG00000004179PRDM58033.028ENSCAFG00000002564ZNF8658031.907
ENSCAFG00000004179PRDM58238.053ENSCAFG00000020085ZFP16838.053
ENSCAFG00000004179PRDM58033.968ENSCAFG00000031471-8733.486
ENSCAFG00000004179PRDM56932.773ENSCAFG00000006638SNAI26234.532
ENSCAFG00000004179PRDM58234.194ENSCAFG00000028550-9935.423
ENSCAFG00000004179PRDM58034.498ENSCAFG00000018071ZNF3177233.438
ENSCAFG00000004179PRDM57540.529ENSCAFG00000032037-10040.529
ENSCAFG00000004179PRDM58735.730ENSCAFG00000029340-8836.991
ENSCAFG00000004179PRDM58036.856ENSCAFG00000029028ZNF2267037.931
ENSCAFG00000004179PRDM57531.282ENSCAFG00000008559ZNF3198831.795
ENSCAFG00000004179PRDM58138.140ENSCAFG00000014700MYNN5338.140
ENSCAFG00000004179PRDM57430.000ENSCAFG00000016793ZNF6466830.000
ENSCAFG00000004179PRDM57530.403ENSCAFG00000013087PATZ15630.258
ENSCAFG00000004179PRDM58033.787ENSCAFG00000030117ZNF5997533.787
ENSCAFG00000004179PRDM57936.585ENSCAFG00000032330-9340.299
ENSCAFG00000004179PRDM57930.864ENSCAFG00000006794GTF3A7239.200
ENSCAFG00000004179PRDM58238.571ENSCAFG00000029911ZNF7685636.364
ENSCAFG00000004179PRDM58735.795ENSCAFG00000029288-7535.795
ENSCAFG00000004179PRDM58435.821ENSCAFG00000031857ZNF2356936.050
ENSCAFG00000004179PRDM58440.000ENSCAFG00000000017ZNF2367044.898
ENSCAFG00000004179PRDM59544.444ENSCAFG00000023076PRDM126444.737
ENSCAFG00000004179PRDM58033.180ENSCAFG00000032123-8433.180
ENSCAFG00000004179PRDM55234.783ENSCAFG00000005453OVOL26238.961
ENSCAFG00000004179PRDM57138.462ENSCAFG00000029458SNAI35237.168
ENSCAFG00000004179PRDM58034.513ENSCAFG00000015170ZNF818831.551
ENSCAFG00000004179PRDM58038.462ENSCAFG00000023007-5338.462
ENSCAFG00000004179PRDM58337.048ENSCAFG00000029649-9937.048
ENSCAFG00000004179PRDM58035.542ENSCAFG00000016964MAZ7034.272
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000004179PRDM510086.379ENSG00000138738PRDM59594.615Homo_sapiens
ENSCAFG00000004179PRDM59871.759ENSAPOG00000023220prdm59172.454Acanthochromis_polyacanthus
ENSCAFG00000004179PRDM59984.896ENSAMEG00000003050PRDM510085.069Ailuropoda_melanoleuca
ENSCAFG00000004179PRDM59572.727ENSACIG00000000406prdm59173.206Amphilophus_citrinellus
ENSCAFG00000004179PRDM59873.086ENSAOCG00000014806prdm59173.550Amphiprion_ocellaris
ENSCAFG00000004179PRDM59872.273ENSAPEG00000016846prdm59164.393Amphiprion_percula
ENSCAFG00000004179PRDM59872.390ENSATEG00000013829prdm59172.854Anabas_testudineus
ENSCAFG00000004179PRDM59976.804ENSAPLG00000013828PRDM59776.804Anas_platyrhynchos
ENSCAFG00000004179PRDM59971.157ENSACAG00000012999PRDM59271.157Anolis_carolinensis
ENSCAFG00000004179PRDM59698.492ENSANAG00000027411PRDM58898.492Aotus_nancymaae
ENSCAFG00000004179PRDM59872.622ENSACLG00000017996prdm59173.318Astatotilapia_calliptera
ENSCAFG00000004179PRDM59270.632ENSAMXG00000041864prdm59971.190Astyanax_mexicanus
ENSCAFG00000004179PRDM510085.172ENSBTAG00000012111PRDM59285.172Bos_taurus
ENSCAFG00000004179PRDM59698.995ENSCJAG00000003133PRDM58798.995Callithrix_jacchus
ENSCAFG00000004179PRDM510087.931ENSCAFG00020017685PRDM59189.095Canis_lupus_dingo
ENSCAFG00000004179PRDM510084.483ENSCHIG00000018772PRDM59186.079Capra_hircus
ENSCAFG00000004179PRDM510084.667ENSTSYG00000009630PRDM59187.007Carlito_syrichta
ENSCAFG00000004179PRDM59593.939ENSCAPG00000015217PRDM510093.939Cavia_aperea
ENSCAFG00000004179PRDM59697.990ENSCPOG00000012883PRDM510093.939Cavia_porcellus
ENSCAFG00000004179PRDM59698.995ENSCCAG00000023157PRDM58898.995Cebus_capucinus
ENSCAFG00000004179PRDM59699.497ENSCATG00000042510PRDM58799.497Cercocebus_atys
ENSCAFG00000004179PRDM59697.990ENSCLAG00000005392PRDM510093.939Chinchilla_lanigera
ENSCAFG00000004179PRDM59687.703ENSCSAG00000003729PRDM59187.703Chlorocebus_sabaeus
ENSCAFG00000004179PRDM510080.488ENSCHOG00000007801PRDM58280.488Choloepus_hoffmanni
ENSCAFG00000004179PRDM59975.510ENSCPBG00000024735PRDM59275.510Chrysemys_picta_bellii
ENSCAFG00000004179PRDM59699.497ENSCANG00000036807PRDM58799.497Colobus_angolensis_palliatus
ENSCAFG00000004179PRDM59697.990ENSCGRG00001010581Prdm58897.990Cricetulus_griseus_chok1gshd
ENSCAFG00000004179PRDM510070.669ENSCGRG00000010996-9573.733Cricetulus_griseus_crigri
ENSCAFG00000004179PRDM59873.086ENSCSEG00000019979prdm59173.086Cynoglossus_semilaevis
ENSCAFG00000004179PRDM59965.862ENSCVAG00000013692prdm59166.207Cyprinodon_variegatus
ENSCAFG00000004179PRDM510069.588ENSDARG00000006288prdm59269.588Danio_rerio
ENSCAFG00000004179PRDM59985.938ENSDNOG00000002009PRDM510085.938Dasypus_novemcinctus
ENSCAFG00000004179PRDM59697.990ENSDORG00000007739Prdm58797.990Dipodomys_ordii
ENSCAFG00000004179PRDM59776.087ENSETEG00000020268PRDM58476.087Echinops_telfairi
ENSCAFG00000004179PRDM59865.127ENSEBUG00000004301prdm59165.278Eptatretus_burgeri
ENSCAFG00000004179PRDM59699.497ENSEASG00005018365PRDM58699.497Equus_asinus_asinus
ENSCAFG00000004179PRDM59987.959ENSECAG00000011516PRDM58187.959Equus_caballus
ENSCAFG00000004179PRDM59681.991ENSECAG00000024747-8681.991Equus_caballus
ENSCAFG00000004179PRDM59975.573ENSEEUG00000010306PRDM59176.840Erinaceus_europaeus
ENSCAFG00000004179PRDM59971.660ENSELUG00000005894prdm59167.556Esox_lucius
ENSCAFG00000004179PRDM510087.069ENSFCAG00000025656PRDM59188.631Felis_catus
ENSCAFG00000004179PRDM58366.914ENSFALG00000008381PRDM58466.914Ficedula_albicollis
ENSCAFG00000004179PRDM59698.492ENSFDAG00000021361PRDM58798.492Fukomys_damarensis
ENSCAFG00000004179PRDM59873.086ENSFHEG00000013040prdm59173.318Fundulus_heteroclitus
ENSCAFG00000004179PRDM58093.939ENSGMOG00000012038prdm58693.939Gadus_morhua
ENSCAFG00000004179PRDM59976.976ENSGALG00000011963PRDM59276.976Gallus_gallus
ENSCAFG00000004179PRDM59972.470ENSGAFG00000019233prdm59173.550Gambusia_affinis
ENSCAFG00000004179PRDM59976.596ENSGAGG00000020362PRDM58976.596Gopherus_agassizii
ENSCAFG00000004179PRDM59699.497ENSGGOG00000013562PRDM58799.497Gorilla_gorilla
ENSCAFG00000004179PRDM59672.390ENSHBUG00000023375prdm59173.086Haplochromis_burtoni
ENSCAFG00000004179PRDM59697.980ENSHGLG00000003010PRDM58797.980Heterocephalus_glaber_female
ENSCAFG00000004179PRDM59697.990ENSHGLG00100003696PRDM58797.990Heterocephalus_glaber_male
ENSCAFG00000004179PRDM59970.568ENSHCOG00000012131prdm59270.740Hippocampus_comes
ENSCAFG00000004179PRDM510071.134ENSIPUG00000001248prdm59173.148Ictalurus_punctatus
ENSCAFG00000004179PRDM59694.472ENSSTOG00000004741PRDM59893.939Ictidomys_tridecemlineatus
ENSCAFG00000004179PRDM59697.487ENSJJAG00000011464Prdm510093.939Jaculus_jaculus
ENSCAFG00000004179PRDM59673.148ENSKMAG00000013663prdm59173.148Kryptolebias_marmoratus
ENSCAFG00000004179PRDM59970.172ENSLBEG00000022736prdm59271.379Labrus_bergylta
ENSCAFG00000004179PRDM59975.043ENSLACG00000009187PRDM59975.172Latimeria_chalumnae
ENSCAFG00000004179PRDM510073.276ENSLOCG00000009778prdm59273.448Lepisosteus_oculatus
ENSCAFG00000004179PRDM59686.543ENSLAFG00000006532PRDM59988.945Loxodonta_africana
ENSCAFG00000004179PRDM59699.497ENSMFAG00000045845PRDM58799.497Macaca_fascicularis
ENSCAFG00000004179PRDM59699.497ENSMMUG00000003249PRDM58799.497Macaca_mulatta
ENSCAFG00000004179PRDM59699.497ENSMNEG00000019018PRDM58799.497Macaca_nemestrina
ENSCAFG00000004179PRDM510086.379ENSMLEG00000023145PRDM59687.703Mandrillus_leucophaeus
ENSCAFG00000004179PRDM59969.828ENSMAMG00000013419prdm59170.224Mastacembelus_armatus
ENSCAFG00000004179PRDM59672.390ENSMZEG00005020645prdm59173.086Maylandia_zebra
ENSCAFG00000004179PRDM59976.976ENSMGAG00000010710PRDM59776.976Meleagris_gallopavo
ENSCAFG00000004179PRDM59697.990ENSMAUG00000006768Prdm58897.990Mesocricetus_auratus
ENSCAFG00000004179PRDM59697.990ENSMICG00000001459PRDM58897.990Microcebus_murinus
ENSCAFG00000004179PRDM59697.990ENSMOCG00000016267Prdm58897.990Microtus_ochrogaster
ENSCAFG00000004179PRDM59673.086ENSMMOG00000006035prdm59173.086Mola_mola
ENSCAFG00000004179PRDM59972.289ENSMODG00000018942PRDM59272.260Monodelphis_domestica
ENSCAFG00000004179PRDM59668.910ENSMALG00000013934prdm59169.142Monopterus_albus
ENSCAFG00000004179PRDM59697.990MGP_CAROLIEiJ_G0028463Prdm58897.990Mus_caroli
ENSCAFG00000004179PRDM59697.487ENSMUSG00000029913Prdm58797.487Mus_musculus
ENSCAFG00000004179PRDM59697.990MGP_PahariEiJ_G0022203Prdm58897.990Mus_pahari
ENSCAFG00000004179PRDM59697.487MGP_SPRETEiJ_G0029467Prdm58797.487Mus_spretus
ENSCAFG00000004179PRDM510086.207ENSMPUG00000017415PRDM59286.207Mustela_putorius_furo
ENSCAFG00000004179PRDM59980.656ENSMLUG00000006097PRDM510080.138Myotis_lucifugus
ENSCAFG00000004179PRDM59698.492ENSNGAG00000018317Prdm58898.492Nannospalax_galili
ENSCAFG00000004179PRDM59771.689ENSNBRG00000004976prdm59172.374Neolamprologus_brichardi
ENSCAFG00000004179PRDM59699.497ENSNLEG00000009107PRDM58799.497Nomascus_leucogenys
ENSCAFG00000004179PRDM57191.453ENSMEUG00000006576-6191.453Notamacropus_eugenii
ENSCAFG00000004179PRDM58596.198ENSOPRG00000011066-8667.245Ochotona_princeps
ENSCAFG00000004179PRDM59698.492ENSODEG00000009133PRDM58798.492Octodon_degus
ENSCAFG00000004179PRDM59970.517ENSONIG00000003111prdm59170.862Oreochromis_niloticus
ENSCAFG00000004179PRDM59775.626ENSOANG00000015109PRDM58875.626Ornithorhynchus_anatinus
ENSCAFG00000004179PRDM57455.932ENSOANG00000006197-10055.932Ornithorhynchus_anatinus
ENSCAFG00000004179PRDM510082.759ENSOCUG00000013454PRDM59982.759Oryctolagus_cuniculus
ENSCAFG00000004179PRDM59872.854ENSORLG00000016247prdm59173.782Oryzias_latipes
ENSCAFG00000004179PRDM59673.086ENSORLG00020018051prdm59173.782Oryzias_latipes_hni
ENSCAFG00000004179PRDM59872.854ENSORLG00015013760prdm59173.782Oryzias_latipes_hsok
ENSCAFG00000004179PRDM59872.222ENSOMEG00000005143prdm59172.917Oryzias_melastigma
ENSCAFG00000004179PRDM59278.008ENSOGAG00000009996PRDM59877.612Otolemur_garnettii
ENSCAFG00000004179PRDM59986.433ENSOARG00000015473PRDM510086.433Ovis_aries
ENSCAFG00000004179PRDM510086.379ENSPPAG00000043045PRDM59986.379Pan_paniscus
ENSCAFG00000004179PRDM510086.897ENSPPRG00000001020PRDM59188.399Panthera_pardus
ENSCAFG00000004179PRDM510086.897ENSPTIG00000010807PRDM59188.399Panthera_tigris_altaica
ENSCAFG00000004179PRDM59699.497ENSPTRG00000016403PRDM58799.497Pan_troglodytes
ENSCAFG00000004179PRDM59699.497ENSPANG00000023612PRDM58799.497Papio_anubis
ENSCAFG00000004179PRDM59648.315ENSPKIG00000015492prdm59048.009Paramormyrops_kingsleyae
ENSCAFG00000004179PRDM59976.460ENSPSIG00000013505PRDM59276.460Pelodiscus_sinensis
ENSCAFG00000004179PRDM59668.677ENSPMGG00000012622prdm59168.910Periophthalmus_magnuspinnatus
ENSCAFG00000004179PRDM58067.233ENSPMAG00000005248prdm510067.233Petromyzon_marinus
ENSCAFG00000004179PRDM59867.702ENSPFOG00000018630prdm58667.702Poecilia_formosa
ENSCAFG00000004179PRDM59971.134ENSPLAG00000014148prdm59271.134Poecilia_latipinna
ENSCAFG00000004179PRDM59873.550ENSPMEG00000018002prdm59173.550Poecilia_mexicana
ENSCAFG00000004179PRDM59873.550ENSPREG00000018366prdm59173.550Poecilia_reticulata
ENSCAFG00000004179PRDM510086.379ENSPPYG00000015031PRDM59286.379Pongo_abelii
ENSCAFG00000004179PRDM510079.138ENSPCAG00000011671PRDM59779.138Procavia_capensis
ENSCAFG00000004179PRDM59697.990ENSPCOG00000022828PRDM58797.990Propithecus_coquereli
ENSCAFG00000004179PRDM510080.241ENSPVAG00000012309PRDM59780.241Pteropus_vampyrus
ENSCAFG00000004179PRDM59872.622ENSPNYG00000012194prdm59173.318Pundamilia_nyererei
ENSCAFG00000004179PRDM59673.380ENSPNAG00000026181prdm59173.380Pygocentrus_nattereri
ENSCAFG00000004179PRDM510068.900ENSPNAG00000023191-9968.900Pygocentrus_nattereri
ENSCAFG00000004179PRDM59682.135ENSRNOG00000023679Prdm59182.135Rattus_norvegicus
ENSCAFG00000004179PRDM59699.497ENSRBIG00000041307PRDM58799.497Rhinopithecus_bieti
ENSCAFG00000004179PRDM59674.194ENSRROG00000035343PRDM59675.517Rhinopithecus_roxellana
ENSCAFG00000004179PRDM59698.995ENSSBOG00000022100PRDM58898.995Saimiri_boliviensis_boliviensis
ENSCAFG00000004179PRDM59974.385ENSSHAG00000003250PRDM510074.385Sarcophilus_harrisii
ENSCAFG00000004179PRDM510066.609ENSSFOG00015020478prdm59266.609Scleropages_formosus
ENSCAFG00000004179PRDM59970.517ENSSMAG00000018844prdm59173.318Scophthalmus_maximus
ENSCAFG00000004179PRDM59971.944ENSSDUG00000020397prdm59173.550Seriola_dumerili
ENSCAFG00000004179PRDM59673.086ENSSLDG00000013353prdm59173.550Seriola_lalandi_dorsalis
ENSCAFG00000004179PRDM59878.814ENSSARG00000014129-6678.814Sorex_araneus
ENSCAFG00000004179PRDM59890.452ENSSPUG00000009941PRDM58790.452Sphenodon_punctatus
ENSCAFG00000004179PRDM59970.690ENSSPAG00000013866prdm59271.034Stegastes_partitus
ENSCAFG00000004179PRDM510086.207ENSSSCG00000009101PRDM59587.324Sus_scrofa
ENSCAFG00000004179PRDM59976.166ENSTGUG00000001920PRDM59676.166Taeniopygia_guttata
ENSCAFG00000004179PRDM59673.318ENSTRUG00000013850prdm59173.318Takifugu_rubripes
ENSCAFG00000004179PRDM59955.707ENSTNIG00000005901prdm59157.011Tetraodon_nigroviridis
ENSCAFG00000004179PRDM59796.875ENSTBEG00000015386PRDM58296.875Tupaia_belangeri
ENSCAFG00000004179PRDM510085.345ENSTTRG00000010996PRDM59285.345Tursiops_truncatus
ENSCAFG00000004179PRDM59998.291ENSUAMG00000009994PRDM57299.497Ursus_americanus
ENSCAFG00000004179PRDM59699.497ENSUMAG00000003733PRDM59199.497Ursus_maritimus
ENSCAFG00000004179PRDM510076.552ENSVPAG00000007435PRDM59576.552Vicugna_pacos
ENSCAFG00000004179PRDM510087.759ENSVVUG00000013192PRDM59987.759Vulpes_vulpes
ENSCAFG00000004179PRDM510071.084ENSXETG00000002101prdm59271.084Xenopus_tropicalis
ENSCAFG00000004179PRDM59873.318ENSXCOG00000008567prdm59173.318Xiphophorus_couchianus
ENSCAFG00000004179PRDM59873.318ENSXMAG00000013825prdm59173.318Xiphophorus_maculatus

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