EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000004272 (Gene tree)
Gene ID: 475368
Gene Symbol: RAD54L
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 28612 bases
Position: chr15:14111329-14139940
Accession: 49611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000006360	ResIII	PF04851.15	1.7e-08	1	1
ENSCAFP00000006360	DEAD	PF00270.29	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000006871	-	2990	XM_005629037	ENSCAFP00000006360	747 (aa)	XP_005629094	F1PJC9

Gene Model

Click here to download ENSCAFG00000004272's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000004272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000004272	RAD54L	89	43.750	ENSCAFG00000009179	RAD54B	75	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000004272	RAD54L	99	94.906	ENSG00000085999	RAD54L	100	98.667	Homo_sapiens
ENSCAFG00000004272	RAD54L	99	76.716	ENSAPOG00000011643	rad54l	99	76.716	Acanthochromis_polyacanthus
ENSCAFG00000004272	RAD54L	99	97.721	ENSAMEG00000013902	RAD54L	99	97.721	Ailuropoda_melanoleuca
ENSCAFG00000004272	RAD54L	99	77.450	ENSACIG00000001939	rad54l	99	77.450	Amphilophus_citrinellus
ENSCAFG00000004272	RAD54L	99	79.408	ENSAOCG00000017576	rad54l	99	79.408	Amphiprion_ocellaris
ENSCAFG00000004272	RAD54L	95	80.591	ENSAPEG00000020658	rad54l	98	80.591	Amphiprion_percula
ENSCAFG00000004272	RAD54L	94	81.935	ENSATEG00000006767	rad54l	99	81.935	Anabas_testudineus
ENSCAFG00000004272	RAD54L	94	85.938	ENSAPLG00000006389	RAD54L	99	85.938	Anas_platyrhynchos
ENSCAFG00000004272	RAD54L	99	83.936	ENSACAG00000002312	RAD54L	99	83.936	Anolis_carolinensis
ENSCAFG00000004272	RAD54L	99	94.772	ENSANAG00000035439	RAD54L	99	94.772	Aotus_nancymaae
ENSCAFG00000004272	RAD54L	99	76.944	ENSACLG00000018711	rad54l	99	76.944	Astatotilapia_calliptera
ENSCAFG00000004272	RAD54L	99	80.027	ENSAMXG00000012777	rad54l	99	80.027	Astyanax_mexicanus
ENSCAFG00000004272	RAD54L	99	95.448	ENSBTAG00000019901	RAD54L	99	95.448	Bos_taurus
ENSCAFG00000004272	RAD54L	93	58.250	WBGene00004298	rad-54	84	58.250	Caenorhabditis_elegans
ENSCAFG00000004272	RAD54L	99	91.444	ENSCJAG00000021080	RAD54L	94	94.128	Callithrix_jacchus
ENSCAFG00000004272	RAD54L	99	100.000	ENSCAFG00020015066	RAD54L	99	100.000	Canis_lupus_dingo
ENSCAFG00000004272	RAD54L	99	95.040	ENSCHIG00000020118	RAD54L	99	95.040	Capra_hircus
ENSCAFG00000004272	RAD54L	99	92.771	ENSTSYG00000002032	RAD54L	99	92.771	Carlito_syrichta
ENSCAFG00000004272	RAD54L	99	94.236	ENSCPOG00000006768	RAD54L	99	94.236	Cavia_porcellus
ENSCAFG00000004272	RAD54L	99	94.906	ENSCCAG00000025783	RAD54L	99	94.906	Cebus_capucinus
ENSCAFG00000004272	RAD54L	99	94.638	ENSCATG00000030589	RAD54L	99	94.638	Cercocebus_atys
ENSCAFG00000004272	RAD54L	99	94.638	ENSCLAG00000004645	RAD54L	99	94.638	Chinchilla_lanigera
ENSCAFG00000004272	RAD54L	99	94.772	ENSCSAG00000001229	RAD54L	99	94.772	Chlorocebus_sabaeus
ENSCAFG00000004272	RAD54L	99	86.212	ENSCPBG00000005675	RAD54L	99	86.212	Chrysemys_picta_bellii
ENSCAFG00000004272	RAD54L	99	62.968	ENSCING00000024456	-	99	62.968	Ciona_intestinalis
ENSCAFG00000004272	RAD54L	99	63.411	ENSCSAVG00000010859	-	99	63.411	Ciona_savignyi
ENSCAFG00000004272	RAD54L	99	94.638	ENSCANG00000034891	RAD54L	99	94.638	Colobus_angolensis_palliatus
ENSCAFG00000004272	RAD54L	99	93.029	ENSCGRG00001014807	Rad54l	99	93.029	Cricetulus_griseus_chok1gshd
ENSCAFG00000004272	RAD54L	99	93.029	ENSCGRG00000016038	Rad54l	99	93.029	Cricetulus_griseus_crigri
ENSCAFG00000004272	RAD54L	99	77.987	ENSCSEG00000001983	rad54l	99	77.987	Cynoglossus_semilaevis
ENSCAFG00000004272	RAD54L	77	80.315	ENSCVAG00000019561	rad54l	100	80.315	Cyprinodon_variegatus
ENSCAFG00000004272	RAD54L	99	79.625	ENSDARG00000018623	rad54l	99	79.625	Danio_rerio
ENSCAFG00000004272	RAD54L	99	93.164	ENSDNOG00000003395	RAD54L	99	93.164	Dasypus_novemcinctus
ENSCAFG00000004272	RAD54L	99	82.609	ENSDORG00000002632	Rad54l	99	82.740	Dipodomys_ordii
ENSCAFG00000004272	RAD54L	99	54.967	FBgn0002989	okr	95	54.967	Drosophila_melanogaster
ENSCAFG00000004272	RAD54L	78	95.122	ENSETEG00000000550	RAD54L	78	95.122	Echinops_telfairi
ENSCAFG00000004272	RAD54L	99	96.113	ENSEASG00005004511	RAD54L	99	96.113	Equus_asinus_asinus
ENSCAFG00000004272	RAD54L	100	96.519	ENSECAG00000008760	RAD54L	100	98.387	Equus_caballus
ENSCAFG00000004272	RAD54L	99	88.472	ENSEEUG00000008113	RAD54L	99	88.472	Erinaceus_europaeus
ENSCAFG00000004272	RAD54L	99	79.840	ENSELUG00000002295	rad54l	99	79.840	Esox_lucius
ENSCAFG00000004272	RAD54L	99	96.917	ENSFCAG00000003444	RAD54L	99	96.917	Felis_catus
ENSCAFG00000004272	RAD54L	99	84.203	ENSFALG00000009480	RAD54L	99	84.203	Ficedula_albicollis
ENSCAFG00000004272	RAD54L	99	94.772	ENSFDAG00000007806	RAD54L	99	94.772	Fukomys_damarensis
ENSCAFG00000004272	RAD54L	61	77.313	ENSFHEG00000009824	rad54l	78	77.313	Fundulus_heteroclitus
ENSCAFG00000004272	RAD54L	99	77.987	ENSGMOG00000014568	rad54l	99	77.987	Gadus_morhua
ENSCAFG00000004272	RAD54L	99	84.450	ENSGALG00000010356	RAD54L	92	84.450	Gallus_gallus
ENSCAFG00000004272	RAD54L	91	78.761	ENSGAFG00000011110	rad54l	100	78.761	Gambusia_affinis
ENSCAFG00000004272	RAD54L	99	78.715	ENSGACG00000003111	rad54l	97	78.715	Gasterosteus_aculeatus
ENSCAFG00000004272	RAD54L	99	85.791	ENSGAGG00000014089	RAD54L	96	85.791	Gopherus_agassizii
ENSCAFG00000004272	RAD54L	99	94.772	ENSGGOG00000010602	RAD54L	99	94.772	Gorilla_gorilla
ENSCAFG00000004272	RAD54L	99	77.078	ENSHBUG00000007793	rad54l	99	77.078	Haplochromis_burtoni
ENSCAFG00000004272	RAD54L	99	94.772	ENSHGLG00000000753	RAD54L	99	94.772	Heterocephalus_glaber_female
ENSCAFG00000004272	RAD54L	99	94.638	ENSHGLG00100016987	RAD54L	99	94.638	Heterocephalus_glaber_male
ENSCAFG00000004272	RAD54L	99	77.467	ENSIPUG00000015999	rad54l	99	80.687	Ictalurus_punctatus
ENSCAFG00000004272	RAD54L	100	94.244	ENSSTOG00000029125	RAD54L	100	94.244	Ictidomys_tridecemlineatus
ENSCAFG00000004272	RAD54L	99	80.537	ENSJJAG00000000235	-	99	80.537	Jaculus_jaculus
ENSCAFG00000004272	RAD54L	99	78.495	ENSKMAG00000009944	rad54l	99	78.495	Kryptolebias_marmoratus
ENSCAFG00000004272	RAD54L	99	79.435	ENSLBEG00000014617	rad54l	99	81.606	Labrus_bergylta
ENSCAFG00000004272	RAD54L	99	80.831	ENSLOCG00000004144	rad54l	100	82.344	Lepisosteus_oculatus
ENSCAFG00000004272	RAD54L	99	94.899	ENSLAFG00000007583	RAD54L	99	94.899	Loxodonta_africana
ENSCAFG00000004272	RAD54L	100	94.645	ENSMFAG00000031241	RAD54L	100	94.645	Macaca_fascicularis
ENSCAFG00000004272	RAD54L	100	94.645	ENSMMUG00000011568	RAD54L	100	94.645	Macaca_mulatta
ENSCAFG00000004272	RAD54L	100	94.645	ENSMNEG00000038562	RAD54L	100	94.645	Macaca_nemestrina
ENSCAFG00000004272	RAD54L	99	94.772	ENSMLEG00000038145	RAD54L	99	94.772	Mandrillus_leucophaeus
ENSCAFG00000004272	RAD54L	99	78.418	ENSMAMG00000022180	rad54l	100	81.232	Mastacembelus_armatus
ENSCAFG00000004272	RAD54L	99	76.810	ENSMZEG00005018081	rad54l	99	76.810	Maylandia_zebra
ENSCAFG00000004272	RAD54L	99	84.295	ENSMGAG00000010634	RAD54L	99	84.295	Meleagris_gallopavo
ENSCAFG00000004272	RAD54L	99	92.493	ENSMAUG00000020076	Rad54l	99	92.493	Mesocricetus_auratus
ENSCAFG00000004272	RAD54L	100	94.645	ENSMICG00000003266	RAD54L	100	94.645	Microcebus_murinus
ENSCAFG00000004272	RAD54L	99	93.432	ENSMOCG00000001778	Rad54l	99	93.432	Microtus_ochrogaster
ENSCAFG00000004272	RAD54L	99	75.603	ENSMALG00000021148	rad54l	99	75.603	Monopterus_albus
ENSCAFG00000004272	RAD54L	99	89.309	MGP_CAROLIEiJ_G0026325	Rad54l	99	89.309	Mus_caroli
ENSCAFG00000004272	RAD54L	99	94.236	ENSMUSG00000028702	Rad54l	99	94.236	Mus_musculus
ENSCAFG00000004272	RAD54L	99	93.834	MGP_PahariEiJ_G0028657	Rad54l	99	93.834	Mus_pahari
ENSCAFG00000004272	RAD54L	99	94.370	MGP_SPRETEiJ_G0027297	Rad54l	99	94.370	Mus_spretus
ENSCAFG00000004272	RAD54L	99	97.051	ENSMPUG00000012883	RAD54L	99	97.051	Mustela_putorius_furo
ENSCAFG00000004272	RAD54L	99	96.376	ENSMLUG00000003763	RAD54L	99	96.376	Myotis_lucifugus
ENSCAFG00000004272	RAD54L	99	92.225	ENSNGAG00000024213	Rad54l	99	92.225	Nannospalax_galili
ENSCAFG00000004272	RAD54L	99	94.370	ENSNLEG00000016548	RAD54L	99	94.370	Nomascus_leucogenys
ENSCAFG00000004272	RAD54L	90	84.911	ENSMEUG00000006793	RAD54L	99	84.911	Notamacropus_eugenii
ENSCAFG00000004272	RAD54L	90	94.077	ENSOPRG00000016016	RAD54L	90	94.077	Ochotona_princeps
ENSCAFG00000004272	RAD54L	99	94.638	ENSODEG00000008519	RAD54L	99	94.638	Octodon_degus
ENSCAFG00000004272	RAD54L	99	77.078	ENSONIG00000007659	rad54l	99	77.078	Oreochromis_niloticus
ENSCAFG00000004272	RAD54L	99	93.834	ENSOCUG00000005229	RAD54L	99	93.834	Oryctolagus_cuniculus
ENSCAFG00000004272	RAD54L	99	76.510	ENSORLG00000002958	rad54l	99	77.315	Oryzias_latipes
ENSCAFG00000004272	RAD54L	99	77.450	ENSORLG00020006554	rad54l	99	80.735	Oryzias_latipes_hni
ENSCAFG00000004272	RAD54L	99	77.315	ENSORLG00015002907	rad54l	99	77.181	Oryzias_latipes_hsok
ENSCAFG00000004272	RAD54L	99	77.450	ENSOMEG00000007770	rad54l	99	77.450	Oryzias_melastigma
ENSCAFG00000004272	RAD54L	99	94.786	ENSOARG00000002264	RAD54L	99	94.786	Ovis_aries
ENSCAFG00000004272	RAD54L	99	94.906	ENSPPAG00000031222	RAD54L	99	94.906	Pan_paniscus
ENSCAFG00000004272	RAD54L	99	96.917	ENSPPRG00000010317	RAD54L	99	96.917	Panthera_pardus
ENSCAFG00000004272	RAD54L	99	96.917	ENSPTIG00000012200	RAD54L	99	96.917	Panthera_tigris_altaica
ENSCAFG00000004272	RAD54L	99	94.772	ENSPTRG00000000689	RAD54L	99	94.772	Pan_troglodytes
ENSCAFG00000004272	RAD54L	99	94.772	ENSPANG00000016295	RAD54L	99	94.772	Papio_anubis
ENSCAFG00000004272	RAD54L	99	76.344	ENSPKIG00000016172	rad54l	99	76.344	Paramormyrops_kingsleyae
ENSCAFG00000004272	RAD54L	99	85.772	ENSPSIG00000003258	RAD54L	99	85.772	Pelodiscus_sinensis
ENSCAFG00000004272	RAD54L	99	75.067	ENSPMGG00000016335	rad54l	99	75.067	Periophthalmus_magnuspinnatus
ENSCAFG00000004272	RAD54L	99	93.298	ENSPEMG00000011422	Rad54l	99	93.298	Peromyscus_maniculatus_bairdii
ENSCAFG00000004272	RAD54L	99	70.628	ENSPMAG00000007719	rad54l	99	70.628	Petromyzon_marinus
ENSCAFG00000004272	RAD54L	99	87.668	ENSPCIG00000029032	RAD54L	99	87.668	Phascolarctos_cinereus
ENSCAFG00000004272	RAD54L	85	81.260	ENSPFOG00000013732	rad54l	99	81.260	Poecilia_formosa
ENSCAFG00000004272	RAD54L	81	79.870	ENSPLAG00000023416	rad54l	99	79.870	Poecilia_latipinna
ENSCAFG00000004272	RAD54L	91	78.909	ENSPMEG00000008299	rad54l	100	78.909	Poecilia_mexicana
ENSCAFG00000004272	RAD54L	99	77.212	ENSPREG00000019955	rad54l	99	77.212	Poecilia_reticulata
ENSCAFG00000004272	RAD54L	93	94.296	ENSPPYG00000001398	RAD54L	100	94.296	Pongo_abelii
ENSCAFG00000004272	RAD54L	80	91.748	ENSPCAG00000005323	RAD54L	80	91.748	Procavia_capensis
ENSCAFG00000004272	RAD54L	99	94.906	ENSPCOG00000015423	RAD54L	99	94.906	Propithecus_coquereli
ENSCAFG00000004272	RAD54L	99	73.475	ENSPNYG00000002942	rad54l	99	73.475	Pundamilia_nyererei
ENSCAFG00000004272	RAD54L	99	79.357	ENSPNAG00000012483	rad54l	99	79.357	Pygocentrus_nattereri
ENSCAFG00000004272	RAD54L	99	93.566	ENSRNOG00000013148	Rad54l	99	93.566	Rattus_norvegicus
ENSCAFG00000004272	RAD54L	99	94.772	ENSRBIG00000043495	RAD54L	99	94.772	Rhinopithecus_bieti
ENSCAFG00000004272	RAD54L	99	94.772	ENSRROG00000020844	RAD54L	99	94.772	Rhinopithecus_roxellana
ENSCAFG00000004272	RAD54L	80	48.217	YGL163C	RAD54	71	48.682	Saccharomyces_cerevisiae
ENSCAFG00000004272	RAD54L	99	94.906	ENSSBOG00000024672	RAD54L	99	94.906	Saimiri_boliviensis_boliviensis
ENSCAFG00000004272	RAD54L	99	87.467	ENSSHAG00000000110	RAD54L	99	87.467	Sarcophilus_harrisii
ENSCAFG00000004272	RAD54L	99	79.088	ENSSDUG00000019147	rad54l	99	79.088	Seriola_dumerili
ENSCAFG00000004272	RAD54L	99	79.223	ENSSLDG00000012330	rad54l	99	79.223	Seriola_lalandi_dorsalis
ENSCAFG00000004272	RAD54L	83	88.604	ENSSARG00000006689	RAD54L	100	88.604	Sorex_araneus
ENSCAFG00000004272	RAD54L	99	78.360	ENSSPAG00000011016	rad54l	99	78.360	Stegastes_partitus
ENSCAFG00000004272	RAD54L	99	95.040	ENSSSCG00000003905	RAD54L	99	95.040	Sus_scrofa
ENSCAFG00000004272	RAD54L	99	83.802	ENSTGUG00000008233	RAD54L	99	83.936	Taeniopygia_guttata
ENSCAFG00000004272	RAD54L	99	74.933	ENSTRUG00000008410	rad54l	99	74.933	Takifugu_rubripes
ENSCAFG00000004272	RAD54L	99	74.899	ENSTNIG00000004716	rad54l	99	75.469	Tetraodon_nigroviridis
ENSCAFG00000004272	RAD54L	99	86.997	ENSTTRG00000006315	RAD54L	99	86.997	Tursiops_truncatus
ENSCAFG00000004272	RAD54L	99	97.035	ENSUAMG00000011824	RAD54L	99	97.035	Ursus_americanus
ENSCAFG00000004272	RAD54L	99	95.687	ENSUMAG00000023603	RAD54L	99	95.687	Ursus_maritimus
ENSCAFG00000004272	RAD54L	100	99.732	ENSVVUG00000007201	RAD54L	100	99.732	Vulpes_vulpes
ENSCAFG00000004272	RAD54L	96	77.886	ENSXETG00000004369	rad54l	99	77.886	Xenopus_tropicalis
ENSCAFG00000004272	RAD54L	55	74.757	ENSXCOG00000016028	rad54l	82	77.309	Xiphophorus_couchianus