EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000004376 (Gene tree)
Gene ID: 476431
Gene Symbol: SYMPK
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 38277 bases
Position: chr1:109757283-109795559
Accession: 47022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000006517	Symplekin_C	PF12295.8	4.3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000007040	-	4657	XM_005616426	ENSCAFP00000006517	1275 (aa)	XP_005616483	F1PSM3

Gene Model

Click here to download ENSCAFG00000004376's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03015	mRNA surveillance pathway	KEGG
cfa04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000004376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000004376	SYMPK	100	97.338	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
ENSCAFG00000004376	SYMPK	84	75.760	ENSAPOG00000015934	sympk	97	74.165	Acanthochromis_polyacanthus
ENSCAFG00000004376	SYMPK	100	98.433	ENSAMEG00000000680	SYMPK	100	98.433	Ailuropoda_melanoleuca
ENSCAFG00000004376	SYMPK	85	74.931	ENSACIG00000006357	sympk	92	74.931	Amphilophus_citrinellus
ENSCAFG00000004376	SYMPK	85	75.184	ENSAOCG00000024124	sympk	96	72.913	Amphiprion_ocellaris
ENSCAFG00000004376	SYMPK	85	75.184	ENSAPEG00000003465	sympk	90	74.482	Amphiprion_percula
ENSCAFG00000004376	SYMPK	87	74.153	ENSATEG00000008472	sympk	91	74.439	Anabas_testudineus
ENSCAFG00000004376	SYMPK	90	78.571	ENSACAG00000004126	SYMPK	99	78.625	Anolis_carolinensis
ENSCAFG00000004376	SYMPK	100	97.494	ENSANAG00000021087	SYMPK	99	99.245	Aotus_nancymaae
ENSCAFG00000004376	SYMPK	87	74.357	ENSACLG00000001813	sympk	91	74.776	Astatotilapia_calliptera
ENSCAFG00000004376	SYMPK	89	72.980	ENSAMXG00000013677	sympk	91	74.309	Astyanax_mexicanus
ENSCAFG00000004376	SYMPK	100	97.338	ENSBTAG00000012101	SYMPK	100	97.338	Bos_taurus
ENSCAFG00000004376	SYMPK	95	98.967	ENSCJAG00000012172	SYMPK	99	97.272	Callithrix_jacchus
ENSCAFG00000004376	SYMPK	100	100.000	ENSCAFG00020001815	SYMPK	100	100.000	Canis_lupus_dingo
ENSCAFG00000004376	SYMPK	100	97.494	ENSCHIG00000026784	SYMPK	100	97.494	Capra_hircus
ENSCAFG00000004376	SYMPK	100	96.721	ENSTSYG00000006268	SYMPK	99	96.721	Carlito_syrichta
ENSCAFG00000004376	SYMPK	83	95.591	ENSCAPG00000005112	SYMPK	96	95.591	Cavia_aperea
ENSCAFG00000004376	SYMPK	100	92.241	ENSCPOG00000010434	SYMPK	100	92.241	Cavia_porcellus
ENSCAFG00000004376	SYMPK	100	97.416	ENSCCAG00000036309	SYMPK	99	99.345	Cebus_capucinus
ENSCAFG00000004376	SYMPK	100	97.416	ENSCATG00000045107	SYMPK	99	99.064	Cercocebus_atys
ENSCAFG00000004376	SYMPK	100	96.166	ENSCLAG00000001206	SYMPK	100	96.166	Chinchilla_lanigera
ENSCAFG00000004376	SYMPK	100	97.416	ENSCSAG00000003115	SYMPK	100	97.416	Chlorocebus_sabaeus
ENSCAFG00000004376	SYMPK	69	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSCAFG00000004376	SYMPK	100	81.399	ENSCPBG00000007170	SYMPK	98	83.879	Chrysemys_picta_bellii
ENSCAFG00000004376	SYMPK	82	49.200	ENSCING00000021232	-	96	49.439	Ciona_intestinalis
ENSCAFG00000004376	SYMPK	81	47.793	ENSCSAVG00000005154	-	100	47.981	Ciona_savignyi
ENSCAFG00000004376	SYMPK	100	94.946	ENSCANG00000040907	SYMPK	100	94.946	Colobus_angolensis_palliatus
ENSCAFG00000004376	SYMPK	92	91.241	ENSCGRG00001010086	Sympk	100	91.363	Cricetulus_griseus_chok1gshd
ENSCAFG00000004376	SYMPK	87	74.283	ENSCSEG00000016802	sympk	91	74.170	Cynoglossus_semilaevis
ENSCAFG00000004376	SYMPK	94	69.130	ENSDARG00000059553	sympk	89	73.429	Danio_rerio
ENSCAFG00000004376	SYMPK	99	95.508	ENSDNOG00000016149	SYMPK	98	95.508	Dasypus_novemcinctus
ENSCAFG00000004376	SYMPK	86	36.955	FBgn0037371	Sym	95	36.955	Drosophila_melanogaster
ENSCAFG00000004376	SYMPK	50	95.860	ENSETEG00000015995	-	54	95.860	Echinops_telfairi
ENSCAFG00000004376	SYMPK	72	59.086	ENSEBUG00000000387	sympk	89	62.327	Eptatretus_burgeri
ENSCAFG00000004376	SYMPK	100	98.199	ENSEASG00005014227	SYMPK	100	98.199	Equus_asinus_asinus
ENSCAFG00000004376	SYMPK	100	98.199	ENSECAG00000008163	SYMPK	100	98.199	Equus_caballus
ENSCAFG00000004376	SYMPK	69	96.000	ENSEEUG00000000270	-	81	96.000	Erinaceus_europaeus
ENSCAFG00000004376	SYMPK	87	75.269	ENSELUG00000000850	sympk	88	75.380	Esox_lucius
ENSCAFG00000004376	SYMPK	100	99.911	ENSFCAG00000007337	SYMPK	100	99.060	Felis_catus
ENSCAFG00000004376	SYMPK	100	95.850	ENSFDAG00000011272	SYMPK	100	96.009	Fukomys_damarensis
ENSCAFG00000004376	SYMPK	86	75.296	ENSFHEG00000010274	sympk	90	75.296	Fundulus_heteroclitus
ENSCAFG00000004376	SYMPK	85	73.241	ENSGMOG00000002357	sympk	99	73.241	Gadus_morhua
ENSCAFG00000004376	SYMPK	86	75.339	ENSGAFG00000010976	sympk	90	75.249	Gambusia_affinis
ENSCAFG00000004376	SYMPK	88	73.040	ENSGACG00000002735	sympk	98	74.839	Gasterosteus_aculeatus
ENSCAFG00000004376	SYMPK	68	76.343	ENSGAGG00000012538	-	88	85.191	Gopherus_agassizii
ENSCAFG00000004376	SYMPK	100	97.338	ENSGGOG00000003410	SYMPK	97	98.503	Gorilla_gorilla
ENSCAFG00000004376	SYMPK	87	74.445	ENSHBUG00000023564	sympk	91	74.865	Haplochromis_burtoni
ENSCAFG00000004376	SYMPK	100	91.393	ENSHGLG00000005228	SYMPK	100	91.393	Heterocephalus_glaber_female
ENSCAFG00000004376	SYMPK	100	91.869	ENSHGLG00100018571	SYMPK	100	91.400	Heterocephalus_glaber_male
ENSCAFG00000004376	SYMPK	85	70.577	ENSHCOG00000017400	sympk	91	70.577	Hippocampus_comes
ENSCAFG00000004376	SYMPK	87	74.347	ENSIPUG00000024020	SYMPK	90	74.283	Ictalurus_punctatus
ENSCAFG00000004376	SYMPK	100	97.100	ENSSTOG00000001534	SYMPK	100	97.100	Ictidomys_tridecemlineatus
ENSCAFG00000004376	SYMPK	100	95.615	ENSJJAG00000006633	Sympk	100	95.615	Jaculus_jaculus
ENSCAFG00000004376	SYMPK	86	75.114	ENSKMAG00000016292	sympk	90	75.114	Kryptolebias_marmoratus
ENSCAFG00000004376	SYMPK	86	75.023	ENSLBEG00000027913	sympk	96	71.309	Labrus_bergylta
ENSCAFG00000004376	SYMPK	95	71.569	ENSLACG00000016497	SYMPK	99	71.628	Latimeria_chalumnae
ENSCAFG00000004376	SYMPK	100	96.948	ENSLAFG00000008726	SYMPK	100	96.948	Loxodonta_africana
ENSCAFG00000004376	SYMPK	100	97.416	ENSMMUG00000015428	SYMPK	100	97.416	Macaca_mulatta
ENSCAFG00000004376	SYMPK	100	97.259	ENSMNEG00000019439	SYMPK	99	98.970	Macaca_nemestrina
ENSCAFG00000004376	SYMPK	100	97.338	ENSMLEG00000040508	SYMPK	99	99.064	Mandrillus_leucophaeus
ENSCAFG00000004376	SYMPK	87	74.281	ENSMAMG00000010486	sympk	89	74.931	Mastacembelus_armatus
ENSCAFG00000004376	SYMPK	87	74.357	ENSMZEG00005014146	sympk	91	74.776	Maylandia_zebra
ENSCAFG00000004376	SYMPK	100	92.416	ENSMAUG00000015657	Sympk	100	92.338	Mesocricetus_auratus
ENSCAFG00000004376	SYMPK	100	97.494	ENSMICG00000001871	SYMPK	100	97.494	Microcebus_murinus
ENSCAFG00000004376	SYMPK	100	93.687	ENSMOCG00000008388	Sympk	100	93.765	Microtus_ochrogaster
ENSCAFG00000004376	SYMPK	91	70.213	ENSMMOG00000019227	sympk	94	73.073	Mola_mola
ENSCAFG00000004376	SYMPK	97	89.555	ENSMODG00000021534	SYMPK	97	88.818	Monodelphis_domestica
ENSCAFG00000004376	SYMPK	73	69.681	ENSMALG00000008347	sympk	96	70.000	Monopterus_albus
ENSCAFG00000004376	SYMPK	100	93.920	MGP_CAROLIEiJ_G0029267	Sympk	100	94.076	Mus_caroli
ENSCAFG00000004376	SYMPK	100	93.106	ENSMUSG00000023118	Sympk	100	93.261	Mus_musculus
ENSCAFG00000004376	SYMPK	100	94.292	MGP_PahariEiJ_G0021127	Sympk	100	94.136	Mus_pahari
ENSCAFG00000004376	SYMPK	100	93.240	MGP_SPRETEiJ_G0030351	-	100	93.395	Mus_spretus
ENSCAFG00000004376	SYMPK	100	97.257	ENSMPUG00000005505	SYMPK	100	97.257	Mustela_putorius_furo
ENSCAFG00000004376	SYMPK	79	92.666	ENSMLUG00000001359	SYMPK	100	92.765	Myotis_lucifugus
ENSCAFG00000004376	SYMPK	100	95.238	ENSNGAG00000000820	Sympk	100	95.394	Nannospalax_galili
ENSCAFG00000004376	SYMPK	84	74.793	ENSNBRG00000018101	sympk	92	75.466	Neolamprologus_brichardi
ENSCAFG00000004376	SYMPK	100	83.528	ENSNLEG00000002369	SYMPK	100	84.009	Nomascus_leucogenys
ENSCAFG00000004376	SYMPK	80	89.810	ENSMEUG00000003866	SYMPK	82	89.810	Notamacropus_eugenii
ENSCAFG00000004376	SYMPK	100	93.897	ENSOPRG00000009967	SYMPK	100	93.897	Ochotona_princeps
ENSCAFG00000004376	SYMPK	100	96.166	ENSODEG00000007519	SYMPK	100	96.166	Octodon_degus
ENSCAFG00000004376	SYMPK	87	74.087	ENSONIG00000016802	sympk	96	74.505	Oreochromis_niloticus
ENSCAFG00000004376	SYMPK	76	97.824	ENSOCUG00000005511	SYMPK	90	97.824	Oryctolagus_cuniculus
ENSCAFG00000004376	SYMPK	86	75.159	ENSORLG00000015338	sympk	96	74.446	Oryzias_latipes
ENSCAFG00000004376	SYMPK	86	75.068	ENSORLG00020004402	sympk	91	75.068	Oryzias_latipes_hni
ENSCAFG00000004376	SYMPK	86	75.159	ENSORLG00015005712	sympk	91	75.159	Oryzias_latipes_hsok
ENSCAFG00000004376	SYMPK	84	75.346	ENSOMEG00000022561	sympk	90	75.161	Oryzias_melastigma
ENSCAFG00000004376	SYMPK	100	97.416	ENSOGAG00000013483	SYMPK	100	97.416	Otolemur_garnettii
ENSCAFG00000004376	SYMPK	100	92.056	ENSOARG00000010349	SYMPK	100	92.056	Ovis_aries
ENSCAFG00000004376	SYMPK	100	97.259	ENSPPAG00000043204	SYMPK	100	97.259	Pan_paniscus
ENSCAFG00000004376	SYMPK	100	98.981	ENSPPRG00000004282	SYMPK	100	98.981	Panthera_pardus
ENSCAFG00000004376	SYMPK	100	96.552	ENSPTIG00000015420	SYMPK	100	96.552	Panthera_tigris_altaica
ENSCAFG00000004376	SYMPK	100	97.259	ENSPTRG00000011169	SYMPK	100	97.259	Pan_troglodytes
ENSCAFG00000004376	SYMPK	100	97.416	ENSPANG00000019930	SYMPK	99	99.064	Papio_anubis
ENSCAFG00000004376	SYMPK	87	76.139	ENSPKIG00000017132	sympk	96	72.775	Paramormyrops_kingsleyae
ENSCAFG00000004376	SYMPK	100	94.228	ENSPEMG00000007564	Sympk	100	94.306	Peromyscus_maniculatus_bairdii
ENSCAFG00000004376	SYMPK	80	65.679	ENSPMAG00000004936	sympk	100	65.774	Petromyzon_marinus
ENSCAFG00000004376	SYMPK	98	88.486	ENSPCIG00000024476	SYMPK	99	87.490	Phascolarctos_cinereus
ENSCAFG00000004376	SYMPK	86	75.453	ENSPFOG00000001194	sympk	90	75.453	Poecilia_formosa
ENSCAFG00000004376	SYMPK	86	75.362	ENSPLAG00000012995	sympk	90	75.362	Poecilia_latipinna
ENSCAFG00000004376	SYMPK	86	75.362	ENSPMEG00000008099	sympk	90	75.362	Poecilia_mexicana
ENSCAFG00000004376	SYMPK	87	75.383	ENSPREG00000006176	sympk	90	75.614	Poecilia_reticulata
ENSCAFG00000004376	SYMPK	87	98.291	ENSPPYG00000010135	SYMPK	99	98.291	Pongo_abelii
ENSCAFG00000004376	SYMPK	94	91.595	ENSPCAG00000005182	SYMPK	94	91.595	Procavia_capensis
ENSCAFG00000004376	SYMPK	100	97.729	ENSPCOG00000023740	SYMPK	99	99.063	Propithecus_coquereli
ENSCAFG00000004376	SYMPK	97	96.699	ENSPVAG00000001355	SYMPK	100	96.699	Pteropus_vampyrus
ENSCAFG00000004376	SYMPK	87	74.357	ENSPNYG00000011455	sympk	90	74.776	Pundamilia_nyererei
ENSCAFG00000004376	SYMPK	89	73.652	ENSPNAG00000016505	sympk	89	75.201	Pygocentrus_nattereri
ENSCAFG00000004376	SYMPK	100	93.765	ENSRNOG00000014353	Sympk	100	93.765	Rattus_norvegicus
ENSCAFG00000004376	SYMPK	100	97.105	ENSRBIG00000040963	SYMPK	99	99.054	Rhinopithecus_bieti
ENSCAFG00000004376	SYMPK	100	97.338	ENSRROG00000024834	SYMPK	100	97.338	Rhinopithecus_roxellana
ENSCAFG00000004376	SYMPK	100	97.416	ENSSBOG00000034497	SYMPK	100	97.416	Saimiri_boliviensis_boliviensis
ENSCAFG00000004376	SYMPK	90	91.327	ENSSHAG00000003139	SYMPK	99	91.327	Sarcophilus_harrisii
ENSCAFG00000004376	SYMPK	87	76.271	ENSSFOG00015006974	sympk	90	76.271	Scleropages_formosus
ENSCAFG00000004376	SYMPK	86	74.435	ENSSMAG00000018130	sympk	72	74.455	Scophthalmus_maximus
ENSCAFG00000004376	SYMPK	93	70.809	ENSSDUG00000007092	sympk	91	74.550	Seriola_dumerili
ENSCAFG00000004376	SYMPK	93	70.809	ENSSLDG00000014774	sympk	96	72.071	Seriola_lalandi_dorsalis
ENSCAFG00000004376	SYMPK	60	100.000	ENSSARG00000004274	-	64	100.000	Sorex_araneus
ENSCAFG00000004376	SYMPK	97	82.470	ENSSPUG00000002789	SYMPK	97	81.274	Sphenodon_punctatus
ENSCAFG00000004376	SYMPK	85	75.691	ENSSPAG00000000854	sympk	90	74.910	Stegastes_partitus
ENSCAFG00000004376	SYMPK	100	98.119	ENSSSCG00000003093	SYMPK	100	98.119	Sus_scrofa
ENSCAFG00000004376	SYMPK	87	74.462	ENSTRUG00000010202	sympk	91	74.527	Takifugu_rubripes
ENSCAFG00000004376	SYMPK	85	74.771	ENSTNIG00000017855	sympk	98	73.964	Tetraodon_nigroviridis
ENSCAFG00000004376	SYMPK	88	94.805	ENSTBEG00000000454	SYMPK	88	94.805	Tupaia_belangeri
ENSCAFG00000004376	SYMPK	100	89.898	ENSTTRG00000014311	SYMPK	100	89.898	Tursiops_truncatus
ENSCAFG00000004376	SYMPK	100	96.317	ENSUAMG00000022272	SYMPK	100	96.163	Ursus_americanus
ENSCAFG00000004376	SYMPK	100	98.668	ENSUMAG00000023698	SYMPK	100	98.668	Ursus_maritimus
ENSCAFG00000004376	SYMPK	89	98.590	ENSVVUG00000003024	SYMPK	99	98.590	Vulpes_vulpes
ENSCAFG00000004376	SYMPK	90	73.003	ENSXETG00000024453	sympk	94	73.090	Xenopus_tropicalis
ENSCAFG00000004376	SYMPK	84	74.561	ENSXCOG00000015368	sympk	100	74.561	Xiphophorus_couchianus
ENSCAFG00000004376	SYMPK	86	75.453	ENSXMAG00000005737	sympk	90	75.453	Xiphophorus_maculatus