EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000004511 (Gene tree)
Gene ID: 485453
Gene Symbol: ZC3H13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 92629 bases
Position: chr22:5126847-5219475
Accession: 48554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000006740	zf-CCCH	PF00642.24	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000007276	-	7489	XM_005633893	ENSCAFP00000006740	1656 (aa)	XP_005633954	E2RN56

Gene Model

Click here to download ENSCAFG00000004511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000004511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000004511	ZC3H13	100	96.635	ENSAMEG00000013117	ZC3H13	100	96.635	Ailuropoda_melanoleuca
ENSCAFG00000004511	ZC3H13	100	99.759	ENSCAFG00020019269	ZC3H13	100	99.759	Canis_lupus_dingo
ENSCAFG00000004511	ZC3H13	53	86.338	ENSCLAG00000000610	ZC3H13	53	84.765	Chinchilla_lanigera
ENSCAFG00000004511	ZC3H13	87	95.575	ENSCHOG00000009724	ZC3H13	87	95.575	Choloepus_hoffmanni
ENSCAFG00000004511	ZC3H13	53	91.514	ENSECAG00000022843	ZC3H13	54	90.940	Equus_caballus
ENSCAFG00000004511	ZC3H13	53	92.997	ENSFCAG00000004877	ZC3H13	52	92.997	Felis_catus
ENSCAFG00000004511	ZC3H13	85	50.560	ENSGACG00000015166	zc3h13	57	55.556	Gasterosteus_aculeatus
ENSCAFG00000004511	ZC3H13	53	85.812	ENSHGLG00000006309	ZC3H13	53	85.649	Heterocephalus_glaber_female
ENSCAFG00000004511	ZC3H13	53	86.674	ENSSTOG00000029682	ZC3H13	53	88.027	Ictidomys_tridecemlineatus
ENSCAFG00000004511	ZC3H13	69	64.875	ENSKMAG00000010701	zc3h13	58	57.795	Kryptolebias_marmoratus
ENSCAFG00000004511	ZC3H13	62	66.337	ENSLACG00000003806	ZC3H13	57	62.235	Latimeria_chalumnae
ENSCAFG00000004511	ZC3H13	53	86.863	ENSMICG00000014772	ZC3H13	53	87.159	Microcebus_murinus
ENSCAFG00000004511	ZC3H13	52	83.142	MGP_CAROLIEiJ_G0019512	Zc3h13	50	82.971	Mus_caroli
ENSCAFG00000004511	ZC3H13	52	83.028	ENSMUSG00000022000	Zc3h13	50	82.857	Mus_musculus
ENSCAFG00000004511	ZC3H13	52	82.683	MGP_PahariEiJ_G0030530	Zc3h13	50	82.514	Mus_pahari
ENSCAFG00000004511	ZC3H13	52	82.913	MGP_SPRETEiJ_G0020407	Zc3h13	51	82.743	Mus_spretus
ENSCAFG00000004511	ZC3H13	53	94.151	ENSMPUG00000001602	ZC3H13	100	94.612	Mustela_putorius_furo
ENSCAFG00000004511	ZC3H13	53	85.993	ENSODEG00000005178	ZC3H13	53	84.501	Octodon_degus
ENSCAFG00000004511	ZC3H13	53	87.215	ENSOCUG00000015173	ZC3H13	53	88.060	Oryctolagus_cuniculus
ENSCAFG00000004511	ZC3H13	53	93.226	ENSPPRG00000005440	ZC3H13	52	93.226	Panthera_pardus
ENSCAFG00000004511	ZC3H13	53	91.389	ENSPTIG00000014867	ZC3H13	53	91.389	Panthera_tigris_altaica
ENSCAFG00000004511	ZC3H13	77	95.181	ENSPCAG00000001146	ZC3H13	77	93.574	Procavia_capensis
ENSCAFG00000004511	ZC3H13	66	98.378	ENSPVAG00000012353	ZC3H13	69	85.276	Pteropus_vampyrus
ENSCAFG00000004511	ZC3H13	52	82.514	ENSRNOG00000011237	Zc3h13	50	82.346	Rattus_norvegicus
ENSCAFG00000004511	ZC3H13	50	93.098	ENSSARG00000007106	ZC3H13	50	93.405	Sorex_araneus
ENSCAFG00000004511	ZC3H13	53	90.940	ENSUMAG00000016220	ZC3H13	100	95.187	Ursus_maritimus
ENSCAFG00000004511	ZC3H13	84	90.000	ENSVPAG00000005179	ZC3H13	84	90.000	Vicugna_pacos
ENSCAFG00000004511	ZC3H13	100	98.975	ENSVVUG00000028395	ZC3H13	100	98.975	Vulpes_vulpes