EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000005075 (Gene tree)
Gene ID: 476129
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 199014 bases
Position: chr19:38302725-38501738
Accession: 45244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000007596	R3H	PF01424.22	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000008201	-	4796	XM_003432485	ENSCAFP00000007596	1103 (aa)	XP_003432533	E2RJ05

Gene Model

Click here to download ENSCAFG00000005075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000005075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000005075	R3HDM1	67	51.355	ENSCAFG00000004753	ARPP21	88	52.145
ENSCAFG00000005075	R3HDM1	99	47.610	ENSCAFG00000000215	R3HDM2	100	47.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000005075	R3HDM1	100	95.376	ENSG00000048991	R3HDM1	100	95.195	Homo_sapiens
ENSCAFG00000005075	R3HDM1	89	47.846	ENSAPOG00000020850	r3hdm1	97	47.544	Acanthochromis_polyacanthus
ENSCAFG00000005075	R3HDM1	100	99.184	ENSAMEG00000014886	R3HDM1	100	99.184	Ailuropoda_melanoleuca
ENSCAFG00000005075	R3HDM1	89	47.016	ENSAOCG00000005192	r3hdm1	99	46.753	Amphiprion_ocellaris
ENSCAFG00000005075	R3HDM1	89	46.547	ENSAPEG00000016108	r3hdm1	99	46.770	Amphiprion_percula
ENSCAFG00000005075	R3HDM1	89	45.706	ENSATEG00000000232	r3hdm1	99	46.169	Anabas_testudineus
ENSCAFG00000005075	R3HDM1	100	79.874	ENSAPLG00000015231	R3HDM1	100	79.964	Anas_platyrhynchos
ENSCAFG00000005075	R3HDM1	100	76.640	ENSACAG00000001676	R3HDM1	100	77.340	Anolis_carolinensis
ENSCAFG00000005075	R3HDM1	100	96.105	ENSANAG00000035334	R3HDM1	100	96.105	Aotus_nancymaae
ENSCAFG00000005075	R3HDM1	79	50.162	ENSACLG00000027282	r3hdm1	94	49.730	Astatotilapia_calliptera
ENSCAFG00000005075	R3HDM1	93	62.731	ENSAMXG00000003536	r3hdm1	100	62.791	Astyanax_mexicanus
ENSCAFG00000005075	R3HDM1	93	72.902	ENSAMXG00000012861	R3HDM1	100	72.837	Astyanax_mexicanus
ENSCAFG00000005075	R3HDM1	100	92.964	ENSBTAG00000013302	R3HDM1	100	93.228	Bos_taurus
ENSCAFG00000005075	R3HDM1	100	95.920	ENSCJAG00000011718	R3HDM1	100	95.920	Callithrix_jacchus
ENSCAFG00000005075	R3HDM1	100	99.909	ENSCAFG00020016119	R3HDM1	100	99.909	Canis_lupus_dingo
ENSCAFG00000005075	R3HDM1	100	96.011	ENSCHIG00000020851	R3HDM1	100	96.011	Capra_hircus
ENSCAFG00000005075	R3HDM1	100	90.158	ENSCPOG00000012784	R3HDM1	100	90.246	Cavia_porcellus
ENSCAFG00000005075	R3HDM1	100	95.467	ENSCCAG00000027199	R3HDM1	100	95.467	Cebus_capucinus
ENSCAFG00000005075	R3HDM1	99	97.476	ENSCATG00000023642	R3HDM1	100	94.923	Cercocebus_atys
ENSCAFG00000005075	R3HDM1	100	89.886	ENSCLAG00000007962	R3HDM1	100	90.033	Chinchilla_lanigera
ENSCAFG00000005075	R3HDM1	100	91.236	ENSCSAG00000016356	R3HDM1	100	92.084	Chlorocebus_sabaeus
ENSCAFG00000005075	R3HDM1	87	84.932	ENSCHOG00000013638	R3HDM1	91	84.932	Choloepus_hoffmanni
ENSCAFG00000005075	R3HDM1	88	80.576	ENSCPBG00000009645	R3HDM1	100	79.856	Chrysemys_picta_bellii
ENSCAFG00000005075	R3HDM1	100	95.018	ENSCANG00000034748	R3HDM1	100	94.837	Colobus_angolensis_palliatus
ENSCAFG00000005075	R3HDM1	99	89.585	ENSCGRG00001012357	R3hdm1	97	89.585	Cricetulus_griseus_chok1gshd
ENSCAFG00000005075	R3HDM1	99	92.182	ENSCGRG00000012080	R3hdm1	100	91.362	Cricetulus_griseus_crigri
ENSCAFG00000005075	R3HDM1	89	43.384	ENSCSEG00000008944	r3hdm1	93	53.558	Cynoglossus_semilaevis
ENSCAFG00000005075	R3HDM1	89	48.696	ENSCVAG00000007582	r3hdm1	99	47.822	Cyprinodon_variegatus
ENSCAFG00000005075	R3HDM1	100	92.072	ENSDNOG00000000771	R3HDM1	100	92.072	Dasypus_novemcinctus
ENSCAFG00000005075	R3HDM1	100	83.514	ENSETEG00000013606	R3HDM1	100	82.191	Echinops_telfairi
ENSCAFG00000005075	R3HDM1	66	41.425	ENSEBUG00000014746	arpp21	97	42.511	Eptatretus_burgeri
ENSCAFG00000005075	R3HDM1	100	97.552	ENSEASG00005007392	R3HDM1	100	97.552	Equus_asinus_asinus
ENSCAFG00000005075	R3HDM1	100	97.824	ENSECAG00000019114	R3HDM1	100	97.824	Equus_caballus
ENSCAFG00000005075	R3HDM1	91	87.638	ENSEEUG00000012589	R3HDM1	91	87.269	Erinaceus_europaeus
ENSCAFG00000005075	R3HDM1	94	55.504	ENSELUG00000004909	R3HDM1	99	55.370	Esox_lucius
ENSCAFG00000005075	R3HDM1	93	50.628	ENSELUG00000014413	r3hdm1	100	51.752	Esox_lucius
ENSCAFG00000005075	R3HDM1	100	98.731	ENSFCAG00000027113	R3HDM1	100	98.731	Felis_catus
ENSCAFG00000005075	R3HDM1	75	72.875	ENSFALG00000013731	R3HDM1	72	73.225	Ficedula_albicollis
ENSCAFG00000005075	R3HDM1	100	90.158	ENSFDAG00000016478	R3HDM1	99	95.387	Fukomys_damarensis
ENSCAFG00000005075	R3HDM1	89	46.175	ENSFHEG00000018713	r3hdm1	100	47.374	Fundulus_heteroclitus
ENSCAFG00000005075	R3HDM1	57	65.000	ENSGMOG00000006042	-	74	64.224	Gadus_morhua
ENSCAFG00000005075	R3HDM1	83	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSCAFG00000005075	R3HDM1	79	49.518	ENSGAFG00000006203	r3hdm1	94	49.892	Gambusia_affinis
ENSCAFG00000005075	R3HDM1	87	47.502	ENSGACG00000014925	r3hdm1	99	47.738	Gasterosteus_aculeatus
ENSCAFG00000005075	R3HDM1	100	78.571	ENSGAGG00000007840	R3HDM1	100	78.029	Gopherus_agassizii
ENSCAFG00000005075	R3HDM1	100	95.014	ENSGGOG00000008156	R3HDM1	100	94.832	Gorilla_gorilla
ENSCAFG00000005075	R3HDM1	100	90.317	ENSHGLG00000015718	R3HDM1	99	95.203	Heterocephalus_glaber_female
ENSCAFG00000005075	R3HDM1	100	70.082	ENSHGLG00100015374	-	100	70.082	Heterocephalus_glaber_male
ENSCAFG00000005075	R3HDM1	100	90.053	ENSHGLG00100003184	-	100	90.033	Heterocephalus_glaber_male
ENSCAFG00000005075	R3HDM1	79	44.824	ENSHCOG00000013366	r3hdm1	88	59.750	Hippocampus_comes
ENSCAFG00000005075	R3HDM1	85	67.771	ENSIPUG00000013629	r3hdm1	95	69.375	Ictalurus_punctatus
ENSCAFG00000005075	R3HDM1	81	66.587	ENSIPUG00000001676	R3HDM1	99	66.507	Ictalurus_punctatus
ENSCAFG00000005075	R3HDM1	100	95.467	ENSSTOG00000007572	R3HDM1	99	97.048	Ictidomys_tridecemlineatus
ENSCAFG00000005075	R3HDM1	95	71.751	ENSLACG00000005334	R3HDM1	100	71.895	Latimeria_chalumnae
ENSCAFG00000005075	R3HDM1	100	66.874	ENSLOCG00000001641	r3hdm1	100	66.252	Lepisosteus_oculatus
ENSCAFG00000005075	R3HDM1	100	92.606	ENSLAFG00000009065	R3HDM1	100	92.606	Loxodonta_africana
ENSCAFG00000005075	R3HDM1	100	95.286	ENSMFAG00000030331	R3HDM1	100	97.783	Macaca_fascicularis
ENSCAFG00000005075	R3HDM1	100	95.104	ENSMMUG00000009844	R3HDM1	100	94.923	Macaca_mulatta
ENSCAFG00000005075	R3HDM1	100	95.104	ENSMNEG00000027793	R3HDM1	100	97.783	Macaca_nemestrina
ENSCAFG00000005075	R3HDM1	100	95.376	ENSMLEG00000043189	R3HDM1	100	95.195	Mandrillus_leucophaeus
ENSCAFG00000005075	R3HDM1	89	48.706	ENSMAMG00000004532	r3hdm1	93	58.429	Mastacembelus_armatus
ENSCAFG00000005075	R3HDM1	89	48.934	ENSMZEG00005003157	r3hdm1	99	48.353	Maylandia_zebra
ENSCAFG00000005075	R3HDM1	100	79.313	ENSMGAG00000012461	R3HDM1	100	79.223	Meleagris_gallopavo
ENSCAFG00000005075	R3HDM1	100	89.211	ENSMAUG00000010315	R3hdm1	100	91.694	Mesocricetus_auratus
ENSCAFG00000005075	R3HDM1	100	94.570	ENSMICG00000005900	-	100	94.570	Microcebus_murinus
ENSCAFG00000005075	R3HDM1	96	70.170	ENSMICG00000042655	-	100	89.399	Microcebus_murinus
ENSCAFG00000005075	R3HDM1	90	79.012	ENSMODG00000000923	R3HDM1	97	78.992	Monodelphis_domestica
ENSCAFG00000005075	R3HDM1	99	46.453	ENSMALG00000009000	r3hdm1	100	46.348	Monopterus_albus
ENSCAFG00000005075	R3HDM1	100	88.732	MGP_CAROLIEiJ_G0014543	R3hdm1	99	93.542	Mus_caroli
ENSCAFG00000005075	R3HDM1	100	88.820	ENSMUSG00000056211	R3hdm1	99	93.542	Mus_musculus
ENSCAFG00000005075	R3HDM1	100	88.644	MGP_PahariEiJ_G0027779	R3hdm1	99	92.989	Mus_pahari
ENSCAFG00000005075	R3HDM1	100	88.996	MGP_SPRETEiJ_G0015350	R3hdm1	99	93.727	Mus_spretus
ENSCAFG00000005075	R3HDM1	100	98.731	ENSMPUG00000002412	R3HDM1	100	98.731	Mustela_putorius_furo
ENSCAFG00000005075	R3HDM1	100	95.841	ENSMLUG00000013824	R3HDM1	100	95.841	Myotis_lucifugus
ENSCAFG00000005075	R3HDM1	100	95.195	ENSNLEG00000008622	R3HDM1	100	95.014	Nomascus_leucogenys
ENSCAFG00000005075	R3HDM1	89	74.059	ENSMEUG00000011784	R3HDM1	100	73.957	Notamacropus_eugenii
ENSCAFG00000005075	R3HDM1	100	89.613	ENSODEG00000008607	R3HDM1	100	91.362	Octodon_degus
ENSCAFG00000005075	R3HDM1	94	48.463	ENSONIG00000012017	r3hdm1	98	48.244	Oreochromis_niloticus
ENSCAFG00000005075	R3HDM1	100	82.326	ENSOANG00000007987	R3HDM1	100	82.326	Ornithorhynchus_anatinus
ENSCAFG00000005075	R3HDM1	89	94.309	ENSOCUG00000017366	R3HDM1	98	94.309	Oryctolagus_cuniculus
ENSCAFG00000005075	R3HDM1	89	44.477	ENSORLG00000004297	r3hdm1	94	47.511	Oryzias_latipes
ENSCAFG00000005075	R3HDM1	89	46.467	ENSORLG00015017355	r3hdm1	99	46.712	Oryzias_latipes_hsok
ENSCAFG00000005075	R3HDM1	100	94.379	ENSOGAG00000003136	R3HDM1	100	94.379	Otolemur_garnettii
ENSCAFG00000005075	R3HDM1	100	95.739	ENSOARG00000010788	R3HDM1	100	95.648	Ovis_aries
ENSCAFG00000005075	R3HDM1	100	95.204	ENSPPAG00000027858	R3HDM1	100	95.023	Pan_paniscus
ENSCAFG00000005075	R3HDM1	100	98.459	ENSPPRG00000002626	R3HDM1	100	98.459	Panthera_pardus
ENSCAFG00000005075	R3HDM1	100	98.459	ENSPTIG00000016581	R3HDM1	100	98.459	Panthera_tigris_altaica
ENSCAFG00000005075	R3HDM1	100	95.113	ENSPTRG00000012494	R3HDM1	100	94.932	Pan_troglodytes
ENSCAFG00000005075	R3HDM1	100	95.286	ENSPANG00000026448	R3HDM1	100	95.104	Papio_anubis
ENSCAFG00000005075	R3HDM1	84	76.266	ENSPKIG00000004328	r3hdm1	91	76.508	Paramormyrops_kingsleyae
ENSCAFG00000005075	R3HDM1	100	79.024	ENSPSIG00000012915	R3HDM1	100	78.933	Pelodiscus_sinensis
ENSCAFG00000005075	R3HDM1	100	89.613	ENSPEMG00000015187	R3hdm1	100	91.362	Peromyscus_maniculatus_bairdii
ENSCAFG00000005075	R3HDM1	88	41.589	ENSPMAG00000003369	-	98	40.723	Petromyzon_marinus
ENSCAFG00000005075	R3HDM1	100	85.405	ENSPCIG00000002491	R3HDM1	100	85.315	Phascolarctos_cinereus
ENSCAFG00000005075	R3HDM1	89	46.587	ENSPFOG00000015036	r3hdm1	99	46.147	Poecilia_formosa
ENSCAFG00000005075	R3HDM1	80	49.682	ENSPLAG00000018042	r3hdm1	95	49.733	Poecilia_latipinna
ENSCAFG00000005075	R3HDM1	80	49.947	ENSPMEG00000023947	r3hdm1	95	49.252	Poecilia_mexicana
ENSCAFG00000005075	R3HDM1	89	48.418	ENSPREG00000007902	r3hdm1	86	62.740	Poecilia_reticulata
ENSCAFG00000005075	R3HDM1	100	94.475	ENSPPYG00000012815	R3HDM1	100	94.384	Pongo_abelii
ENSCAFG00000005075	R3HDM1	100	82.865	ENSPCAG00000006208	R3HDM1	100	82.412	Procavia_capensis
ENSCAFG00000005075	R3HDM1	100	92.941	ENSPCOG00000012698	R3HDM1	100	94.300	Propithecus_coquereli
ENSCAFG00000005075	R3HDM1	100	87.783	ENSPVAG00000006098	R3HDM1	100	87.783	Pteropus_vampyrus
ENSCAFG00000005075	R3HDM1	67	38.441	ENSPNAG00000004162	arpp21	69	40.858	Pygocentrus_nattereri
ENSCAFG00000005075	R3HDM1	83	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSCAFG00000005075	R3HDM1	93	63.551	ENSPNAG00000013952	r3hdm1	100	63.466	Pygocentrus_nattereri
ENSCAFG00000005075	R3HDM1	100	88.292	ENSRNOG00000004099	R3hdm1	100	87.940	Rattus_norvegicus
ENSCAFG00000005075	R3HDM1	100	94.389	ENSRBIG00000033317	R3HDM1	100	98.893	Rhinopithecus_bieti
ENSCAFG00000005075	R3HDM1	100	95.018	ENSRROG00000034534	R3HDM1	100	94.837	Rhinopithecus_roxellana
ENSCAFG00000005075	R3HDM1	100	95.376	ENSSBOG00000020389	R3HDM1	100	95.376	Saimiri_boliviensis_boliviensis
ENSCAFG00000005075	R3HDM1	100	85.701	ENSSHAG00000016999	R3HDM1	100	85.611	Sarcophilus_harrisii
ENSCAFG00000005075	R3HDM1	93	70.944	ENSSFOG00015014134	r3hdm1	100	70.874	Scleropages_formosus
ENSCAFG00000005075	R3HDM1	100	56.699	ENSSFOG00015019851	-	99	57.397	Scleropages_formosus
ENSCAFG00000005075	R3HDM1	99	45.034	ENSSMAG00000001669	r3hdm1	99	44.991	Scophthalmus_maximus
ENSCAFG00000005075	R3HDM1	89	47.678	ENSSDUG00000010749	r3hdm1	99	48.279	Seriola_dumerili
ENSCAFG00000005075	R3HDM1	99	47.500	ENSSLDG00000004499	r3hdm1	99	47.698	Seriola_lalandi_dorsalis
ENSCAFG00000005075	R3HDM1	69	84.053	ENSSARG00000000352	-	69	84.053	Sorex_araneus
ENSCAFG00000005075	R3HDM1	100	80.939	ENSSPUG00000004167	R3HDM1	100	80.668	Sphenodon_punctatus
ENSCAFG00000005075	R3HDM1	89	49.619	ENSSPAG00000004648	r3hdm1	99	49.803	Stegastes_partitus
ENSCAFG00000005075	R3HDM1	100	97.461	ENSSSCG00000015692	R3HDM1	100	97.461	Sus_scrofa
ENSCAFG00000005075	R3HDM1	100	74.054	ENSTGUG00000011750	R3HDM1	100	74.144	Taeniopygia_guttata
ENSCAFG00000005075	R3HDM1	79	47.318	ENSTRUG00000011654	r3hdm1	93	46.926	Takifugu_rubripes
ENSCAFG00000005075	R3HDM1	83	47.182	ENSTNIG00000010362	r3hdm1	95	46.885	Tetraodon_nigroviridis
ENSCAFG00000005075	R3HDM1	100	89.483	ENSTTRG00000003935	R3HDM1	100	89.483	Tursiops_truncatus
ENSCAFG00000005075	R3HDM1	70	99.227	ENSUAMG00000024806	R3HDM1	99	96.863	Ursus_americanus
ENSCAFG00000005075	R3HDM1	100	94.198	ENSUMAG00000005552	R3HDM1	100	95.765	Ursus_maritimus
ENSCAFG00000005075	R3HDM1	93	100.000	ENSVPAG00000007333	R3HDM1	93	100.000	Vicugna_pacos
ENSCAFG00000005075	R3HDM1	100	96.743	ENSVVUG00000006457	R3HDM1	100	96.743	Vulpes_vulpes
ENSCAFG00000005075	R3HDM1	89	67.907	ENSXETG00000019330	r3hdm1	100	67.706	Xenopus_tropicalis
ENSCAFG00000005075	R3HDM1	67	50.510	ENSXCOG00000017448	r3hdm1	94	50.319	Xiphophorus_couchianus
ENSCAFG00000005075	R3HDM1	89	46.735	ENSXMAG00000007885	r3hdm1	99	45.760	Xiphophorus_maculatus