EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000005185 (Gene tree)
Gene ID: 477133
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 86454 bases
Position: chr24:2042373-2128826
Accession: 48472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000007759	XRN_N	PF03159.18	5.8e-103	1	1
ENSCAFP00000007767	XRN_N	PF03159.18	5.4e-95	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000008370	-	3479	XM_534324	ENSCAFP00000007759	950 (aa)	XP_534324	E2RMS9
ENSCAFT00000008379	-	2847	-	ENSCAFP00000007767	948 (aa)	-	F1PB11

Gene Model

Click here to download ENSCAFG00000005185's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000005185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000005185	XRN2	100	98.000	ENSG00000088930	XRN2	100	98.000	Homo_sapiens
ENSCAFG00000005185	XRN2	97	71.702	ENSAPOG00000009818	xrn2	100	70.438	Acanthochromis_polyacanthus
ENSCAFG00000005185	XRN2	100	99.263	ENSAMEG00000012581	XRN2	100	99.263	Ailuropoda_melanoleuca
ENSCAFG00000005185	XRN2	90	70.159	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSCAFG00000005185	XRN2	97	72.222	ENSAOCG00000023632	xrn2	100	70.964	Amphiprion_ocellaris
ENSCAFG00000005185	XRN2	97	72.051	ENSAPEG00000014871	xrn2	100	70.774	Amphiprion_percula
ENSCAFG00000005185	XRN2	95	71.614	ENSATEG00000001273	xrn2	97	70.930	Anabas_testudineus
ENSCAFG00000005185	XRN2	98	83.459	ENSAPLG00000013869	XRN2	100	83.888	Anas_platyrhynchos
ENSCAFG00000005185	XRN2	100	80.849	ENSACAG00000005565	XRN2	100	80.849	Anolis_carolinensis
ENSCAFG00000005185	XRN2	100	97.579	ENSANAG00000020126	XRN2	100	97.579	Aotus_nancymaae
ENSCAFG00000005185	XRN2	90	73.642	ENSACLG00000010522	xrn2	77	98.667	Astatotilapia_calliptera
ENSCAFG00000005185	XRN2	100	71.211	ENSAMXG00000018301	xrn2	100	71.211	Astyanax_mexicanus
ENSCAFG00000005185	XRN2	100	96.425	ENSBTAG00000011304	XRN2	100	96.425	Bos_taurus
ENSCAFG00000005185	XRN2	87	56.047	WBGene00006964	xrn-2	89	55.317	Caenorhabditis_elegans
ENSCAFG00000005185	XRN2	100	97.579	ENSCJAG00000005611	XRN2	100	97.579	Callithrix_jacchus
ENSCAFG00000005185	XRN2	100	100.000	ENSCAFG00020027479	XRN2	100	100.000	Canis_lupus_dingo
ENSCAFG00000005185	XRN2	100	96.530	ENSCHIG00000006921	XRN2	100	96.530	Capra_hircus
ENSCAFG00000005185	XRN2	100	97.368	ENSTSYG00000008315	XRN2	100	97.368	Carlito_syrichta
ENSCAFG00000005185	XRN2	97	81.985	ENSCAPG00000010773	XRN2	99	81.877	Cavia_aperea
ENSCAFG00000005185	XRN2	100	97.263	ENSCPOG00000009407	XRN2	100	97.263	Cavia_porcellus
ENSCAFG00000005185	XRN2	100	98.316	ENSCATG00000040350	XRN2	100	98.316	Cercocebus_atys
ENSCAFG00000005185	XRN2	100	97.789	ENSCLAG00000013419	XRN2	100	97.789	Chinchilla_lanigera
ENSCAFG00000005185	XRN2	100	98.316	ENSCSAG00000011094	XRN2	100	98.316	Chlorocebus_sabaeus
ENSCAFG00000005185	XRN2	68	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSCAFG00000005185	XRN2	100	84.792	ENSCPBG00000023533	XRN2	100	85.417	Chrysemys_picta_bellii
ENSCAFG00000005185	XRN2	86	60.501	ENSCING00000022336	-	100	60.859	Ciona_intestinalis
ENSCAFG00000005185	XRN2	87	59.308	ENSCSAVG00000011217	-	100	61.787	Ciona_savignyi
ENSCAFG00000005185	XRN2	100	98.316	ENSCANG00000040240	XRN2	100	98.316	Colobus_angolensis_palliatus
ENSCAFG00000005185	XRN2	98	96.340	ENSCGRG00001010676	Xrn2	99	96.340	Cricetulus_griseus_chok1gshd
ENSCAFG00000005185	XRN2	98	95.577	ENSCGRG00000006378	Xrn2	99	95.577	Cricetulus_griseus_crigri
ENSCAFG00000005185	XRN2	54	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSCAFG00000005185	XRN2	89	71.264	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSCAFG00000005185	XRN2	100	69.918	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSCAFG00000005185	XRN2	100	97.368	ENSDNOG00000001895	XRN2	100	97.368	Dasypus_novemcinctus
ENSCAFG00000005185	XRN2	100	95.263	ENSDORG00000005434	Xrn2	100	95.263	Dipodomys_ordii
ENSCAFG00000005185	XRN2	87	56.953	FBgn0031868	Rat1	90	55.582	Drosophila_melanogaster
ENSCAFG00000005185	XRN2	100	83.684	ENSETEG00000001740	XRN2	100	83.684	Echinops_telfairi
ENSCAFG00000005185	XRN2	84	71.515	ENSEBUG00000016136	xrn2	100	72.046	Eptatretus_burgeri
ENSCAFG00000005185	XRN2	100	98.105	ENSEASG00005002484	XRN2	100	98.105	Equus_asinus_asinus
ENSCAFG00000005185	XRN2	99	97.994	ENSECAG00000018988	XRN2	100	96.178	Equus_caballus
ENSCAFG00000005185	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSCAFG00000005185	XRN2	100	70.492	ENSELUG00000000552	xrn2	100	70.902	Esox_lucius
ENSCAFG00000005185	XRN2	100	99.158	ENSFCAG00000007970	XRN2	100	99.158	Felis_catus
ENSCAFG00000005185	XRN2	100	83.019	ENSFALG00000004508	XRN2	100	83.438	Ficedula_albicollis
ENSCAFG00000005185	XRN2	100	97.368	ENSFDAG00000016311	XRN2	100	97.368	Fukomys_damarensis
ENSCAFG00000005185	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSCAFG00000005185	XRN2	86	72.904	ENSGMOG00000013436	xrn2	100	72.904	Gadus_morhua
ENSCAFG00000005185	XRN2	100	83.246	ENSGALG00000008372	XRN2	100	83.246	Gallus_gallus
ENSCAFG00000005185	XRN2	89	73.721	ENSGAFG00000014284	xrn2	98	73.721	Gambusia_affinis
ENSCAFG00000005185	XRN2	87	74.639	ENSGACG00000011870	xrn2	100	74.639	Gasterosteus_aculeatus
ENSCAFG00000005185	XRN2	100	84.792	ENSGAGG00000004884	XRN2	100	85.417	Gopherus_agassizii
ENSCAFG00000005185	XRN2	100	98.211	ENSGGOG00000013738	XRN2	100	98.211	Gorilla_gorilla
ENSCAFG00000005185	XRN2	54	74.664	ENSHBUG00000005077	xrn2	77	98.667	Haplochromis_burtoni
ENSCAFG00000005185	XRN2	100	96.421	ENSHGLG00000014831	XRN2	100	96.421	Heterocephalus_glaber_female
ENSCAFG00000005185	XRN2	100	96.421	ENSHGLG00100013130	XRN2	100	96.421	Heterocephalus_glaber_male
ENSCAFG00000005185	XRN2	99	68.219	ENSHCOG00000011994	xrn2	99	69.130	Hippocampus_comes
ENSCAFG00000005185	XRN2	100	69.592	ENSIPUG00000006639	xrn2	100	69.592	Ictalurus_punctatus
ENSCAFG00000005185	XRN2	100	98.211	ENSSTOG00000000589	XRN2	100	98.211	Ictidomys_tridecemlineatus
ENSCAFG00000005185	XRN2	100	96.526	ENSJJAG00000022128	Xrn2	100	96.526	Jaculus_jaculus
ENSCAFG00000005185	XRN2	54	79.688	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSCAFG00000005185	XRN2	94	77.308	ENSLACG00000008307	XRN2	99	79.877	Latimeria_chalumnae
ENSCAFG00000005185	XRN2	99	72.803	ENSLOCG00000016874	xrn2	100	72.803	Lepisosteus_oculatus
ENSCAFG00000005185	XRN2	100	96.842	ENSLAFG00000014624	XRN2	100	96.842	Loxodonta_africana
ENSCAFG00000005185	XRN2	100	98.316	ENSMFAG00000038122	XRN2	100	98.316	Macaca_fascicularis
ENSCAFG00000005185	XRN2	100	98.316	ENSMMUG00000011405	XRN2	100	98.316	Macaca_mulatta
ENSCAFG00000005185	XRN2	100	98.421	ENSMNEG00000040626	XRN2	100	98.421	Macaca_nemestrina
ENSCAFG00000005185	XRN2	100	98.211	ENSMLEG00000041897	XRN2	100	98.211	Mandrillus_leucophaeus
ENSCAFG00000005185	XRN2	95	73.035	ENSMAMG00000008633	xrn2	98	71.504	Mastacembelus_armatus
ENSCAFG00000005185	XRN2	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSCAFG00000005185	XRN2	99	81.667	ENSMGAG00000003196	XRN2	99	81.667	Meleagris_gallopavo
ENSCAFG00000005185	XRN2	100	96.632	ENSMAUG00000021842	Xrn2	100	96.632	Mesocricetus_auratus
ENSCAFG00000005185	XRN2	100	97.368	ENSMICG00000008126	XRN2	100	97.368	Microcebus_murinus
ENSCAFG00000005185	XRN2	100	95.895	ENSMOCG00000012588	Xrn2	100	95.895	Microtus_ochrogaster
ENSCAFG00000005185	XRN2	89	73.883	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSCAFG00000005185	XRN2	100	90.947	ENSMODG00000006163	XRN2	100	90.947	Monodelphis_domestica
ENSCAFG00000005185	XRN2	91	72.360	ENSMALG00000011355	xrn2	99	72.360	Monopterus_albus
ENSCAFG00000005185	XRN2	100	95.478	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.478	Mus_caroli
ENSCAFG00000005185	XRN2	100	95.689	ENSMUSG00000027433	Xrn2	100	95.689	Mus_musculus
ENSCAFG00000005185	XRN2	100	95.478	MGP_PahariEiJ_G0025843	Xrn2	100	95.478	Mus_pahari
ENSCAFG00000005185	XRN2	100	95.689	MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	Mus_spretus
ENSCAFG00000005185	XRN2	100	97.518	ENSMPUG00000001198	XRN2	93	97.518	Mustela_putorius_furo
ENSCAFG00000005185	XRN2	100	97.368	ENSMLUG00000001536	XRN2	100	97.368	Myotis_lucifugus
ENSCAFG00000005185	XRN2	100	96.842	ENSNGAG00000018138	Xrn2	100	96.842	Nannospalax_galili
ENSCAFG00000005185	XRN2	90	75.810	ENSNBRG00000008062	xrn2	77	98.667	Neolamprologus_brichardi
ENSCAFG00000005185	XRN2	100	98.211	ENSNLEG00000009991	XRN2	100	98.211	Nomascus_leucogenys
ENSCAFG00000005185	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSCAFG00000005185	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSCAFG00000005185	XRN2	100	97.474	ENSODEG00000010745	-	100	97.474	Octodon_degus
ENSCAFG00000005185	XRN2	98	88.350	ENSODEG00000000860	-	99	88.781	Octodon_degus
ENSCAFG00000005185	XRN2	100	71.649	ENSONIG00000018720	xrn2	100	71.856	Oreochromis_niloticus
ENSCAFG00000005185	XRN2	100	91.176	ENSOANG00000015673	XRN2	100	91.176	Ornithorhynchus_anatinus
ENSCAFG00000005185	XRN2	100	98.316	ENSOCUG00000013468	XRN2	100	98.316	Oryctolagus_cuniculus
ENSCAFG00000005185	XRN2	98	70.405	ENSORLG00000017213	xrn2	97	75.058	Oryzias_latipes
ENSCAFG00000005185	XRN2	98	70.405	ENSORLG00020001824	xrn2	100	70.061	Oryzias_latipes_hni
ENSCAFG00000005185	XRN2	98	70.197	ENSORLG00015019747	xrn2	100	69.857	Oryzias_latipes_hsok
ENSCAFG00000005185	XRN2	90	74.220	ENSOMEG00000019820	xrn2	100	69.340	Oryzias_melastigma
ENSCAFG00000005185	XRN2	100	97.161	ENSOGAG00000001068	XRN2	100	97.161	Otolemur_garnettii
ENSCAFG00000005185	XRN2	98	96.544	ENSOARG00000004443	XRN2	100	96.544	Ovis_aries
ENSCAFG00000005185	XRN2	100	98.211	ENSPPAG00000033549	XRN2	100	98.211	Pan_paniscus
ENSCAFG00000005185	XRN2	100	99.158	ENSPPRG00000008732	XRN2	100	99.158	Panthera_pardus
ENSCAFG00000005185	XRN2	98	99.135	ENSPTIG00000015683	XRN2	97	99.135	Panthera_tigris_altaica
ENSCAFG00000005185	XRN2	100	98.211	ENSPTRG00000013308	XRN2	100	98.211	Pan_troglodytes
ENSCAFG00000005185	XRN2	100	98.316	ENSPANG00000018088	XRN2	100	98.316	Papio_anubis
ENSCAFG00000005185	XRN2	100	70.829	ENSPKIG00000016889	xrn2	100	70.829	Paramormyrops_kingsleyae
ENSCAFG00000005185	XRN2	81	87.500	ENSPSIG00000014666	XRN2	100	87.500	Pelodiscus_sinensis
ENSCAFG00000005185	XRN2	100	95.684	ENSPEMG00000000111	Xrn2	100	95.684	Peromyscus_maniculatus_bairdii
ENSCAFG00000005185	XRN2	100	69.990	ENSPFOG00000004182	xrn2	99	70.393	Poecilia_formosa
ENSCAFG00000005185	XRN2	89	74.419	ENSPLAG00000007351	xrn2	96	74.419	Poecilia_latipinna
ENSCAFG00000005185	XRN2	95	68.335	ENSPMEG00000011798	xrn2	99	69.206	Poecilia_mexicana
ENSCAFG00000005185	XRN2	89	74.302	ENSPREG00000012452	xrn2	99	72.727	Poecilia_reticulata
ENSCAFG00000005185	XRN2	100	97.789	ENSPPYG00000010755	XRN2	100	97.789	Pongo_abelii
ENSCAFG00000005185	XRN2	100	91.071	ENSPCAG00000011191	XRN2	100	91.071	Procavia_capensis
ENSCAFG00000005185	XRN2	100	90.632	ENSPCOG00000016468	XRN2	100	90.632	Propithecus_coquereli
ENSCAFG00000005185	XRN2	93	95.745	ENSPVAG00000004596	XRN2	93	95.745	Pteropus_vampyrus
ENSCAFG00000005185	XRN2	90	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSCAFG00000005185	XRN2	100	71.224	ENSPNAG00000010956	xrn2	99	71.224	Pygocentrus_nattereri
ENSCAFG00000005185	XRN2	100	96.425	ENSRNOG00000011785	Xrn2	100	96.425	Rattus_norvegicus
ENSCAFG00000005185	XRN2	86	98.533	ENSRBIG00000036193	XRN2	100	98.533	Rhinopithecus_bieti
ENSCAFG00000005185	XRN2	100	98.316	ENSRROG00000044400	XRN2	90	98.316	Rhinopithecus_roxellana
ENSCAFG00000005185	XRN2	69	52.283	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSCAFG00000005185	XRN2	100	97.789	ENSSBOG00000021014	XRN2	100	97.789	Saimiri_boliviensis_boliviensis
ENSCAFG00000005185	XRN2	100	72.033	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
ENSCAFG00000005185	XRN2	92	73.363	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSCAFG00000005185	XRN2	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSCAFG00000005185	XRN2	93	73.785	ENSSLDG00000021273	xrn2	100	73.785	Seriola_lalandi_dorsalis
ENSCAFG00000005185	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSCAFG00000005185	XRN2	98	79.957	ENSSPUG00000005485	XRN2	96	80.021	Sphenodon_punctatus
ENSCAFG00000005185	XRN2	100	70.624	ENSSPAG00000016027	xrn2	99	70.624	Stegastes_partitus
ENSCAFG00000005185	XRN2	100	96.316	ENSSSCG00000007109	XRN2	100	96.316	Sus_scrofa
ENSCAFG00000005185	XRN2	100	81.837	ENSTGUG00000007535	XRN2	100	82.255	Taeniopygia_guttata
ENSCAFG00000005185	XRN2	100	67.980	ENSTRUG00000015489	xrn2	100	68.352	Takifugu_rubripes
ENSCAFG00000005185	XRN2	100	71.236	ENSTNIG00000010712	xrn2	100	71.236	Tetraodon_nigroviridis
ENSCAFG00000005185	XRN2	100	97.158	ENSTBEG00000004119	XRN2	100	97.158	Tupaia_belangeri
ENSCAFG00000005185	XRN2	93	98.198	ENSTTRG00000009087	XRN2	93	98.198	Tursiops_truncatus
ENSCAFG00000005185	XRN2	100	99.368	ENSUAMG00000024634	XRN2	100	99.368	Ursus_americanus
ENSCAFG00000005185	XRN2	98	99.135	ENSUMAG00000004012	XRN2	95	99.135	Ursus_maritimus
ENSCAFG00000005185	XRN2	89	90.059	ENSVPAG00000010694	XRN2	91	90.059	Vicugna_pacos
ENSCAFG00000005185	XRN2	100	99.684	ENSVVUG00000012178	XRN2	100	99.684	Vulpes_vulpes
ENSCAFG00000005185	XRN2	100	74.348	ENSXETG00000023501	xrn2	100	74.974	Xenopus_tropicalis
ENSCAFG00000005185	XRN2	100	68.448	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus