EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000005206 (Gene tree)
Gene ID: 478014
Gene Symbol: RBM17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 24710 bases
Position: chr2:29829215-29853924
Accession: 45411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000007779	RRM_1	PF00076.22	5.7e-05	1	1
ENSCAFP00000041824	G-patch	PF01585.23	3.3e-13	1	1
ENSCAFP00000007779	G-patch	PF01585.23	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000008395	-	1206	XM_005617171	ENSCAFP00000007779	401 (aa)	XP_005617228	E2RMQ0
ENSCAFT00000047583	-	1182	-	ENSCAFP00000041824	343 (aa)	-	J9NSX2

Gene Model

Click here to download ENSCAFG00000005206's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000005206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000005206	RBM17	100	99.252	ENSG00000134453	RBM17	100	99.528	Homo_sapiens
ENSCAFG00000005206	RBM17	99	82.921	ENSAPOG00000007101	rbm17	99	83.127	Acanthochromis_polyacanthus
ENSCAFG00000005206	RBM17	100	100.000	ENSAMEG00000002107	RBM17	100	100.000	Ailuropoda_melanoleuca
ENSCAFG00000005206	RBM17	100	79.167	ENSACIG00000006251	rbm17	100	79.167	Amphilophus_citrinellus
ENSCAFG00000005206	RBM17	100	83.047	ENSAOCG00000014892	rbm17	100	83.047	Amphiprion_ocellaris
ENSCAFG00000005206	RBM17	100	83.047	ENSAPEG00000022779	rbm17	100	83.047	Amphiprion_percula
ENSCAFG00000005206	RBM17	100	79.009	ENSATEG00000004406	rbm17	100	79.009	Anabas_testudineus
ENSCAFG00000005206	RBM17	100	95.522	ENSAPLG00000004190	RBM17	100	95.522	Anas_platyrhynchos
ENSCAFG00000005206	RBM17	89	90.000	ENSACAG00000005418	RBM17	99	90.270	Anolis_carolinensis
ENSCAFG00000005206	RBM17	100	99.252	ENSANAG00000030127	RBM17	100	99.252	Aotus_nancymaae
ENSCAFG00000005206	RBM17	100	84.826	ENSANAG00000019330	-	97	94.068	Aotus_nancymaae
ENSCAFG00000005206	RBM17	100	79.012	ENSACLG00000003928	rbm17	100	79.012	Astatotilapia_calliptera
ENSCAFG00000005206	RBM17	100	77.176	ENSAMXG00000005853	rbm17	100	79.765	Astyanax_mexicanus
ENSCAFG00000005206	RBM17	100	97.756	ENSBTAG00000011094	-	100	97.756	Bos_taurus
ENSCAFG00000005206	RBM17	100	99.252	ENSBTAG00000021951	RBM17	100	99.252	Bos_taurus
ENSCAFG00000005206	RBM17	73	34.448	WBGene00010233	F58B3.7	91	32.817	Caenorhabditis_elegans
ENSCAFG00000005206	RBM17	100	99.252	ENSCJAG00000020573	RBM17	100	99.252	Callithrix_jacchus
ENSCAFG00000005206	RBM17	100	95.511	ENSCAFG00020005420	RBM17	100	95.511	Canis_lupus_dingo
ENSCAFG00000005206	RBM17	100	99.252	ENSCHIG00000023204	-	100	99.252	Capra_hircus
ENSCAFG00000005206	RBM17	100	96.509	ENSCHIG00000019921	-	100	96.509	Capra_hircus
ENSCAFG00000005206	RBM17	100	97.284	ENSTSYG00000001165	RBM17	100	97.284	Carlito_syrichta
ENSCAFG00000005206	RBM17	96	75.844	ENSCAPG00000006275	RBM17	100	79.235	Cavia_aperea
ENSCAFG00000005206	RBM17	100	94.118	ENSCPOG00000005679	RBM17	100	94.118	Cavia_porcellus
ENSCAFG00000005206	RBM17	100	99.252	ENSCCAG00000018655	RBM17	100	99.252	Cebus_capucinus
ENSCAFG00000005206	RBM17	100	99.252	ENSCATG00000041566	RBM17	100	99.252	Cercocebus_atys
ENSCAFG00000005206	RBM17	100	98.272	ENSCLAG00000012195	RBM17	99	98.272	Chinchilla_lanigera
ENSCAFG00000005206	RBM17	100	99.252	ENSCSAG00000013564	RBM17	100	99.252	Chlorocebus_sabaeus
ENSCAFG00000005206	RBM17	90	86.129	ENSCHOG00000005131	RBM17	100	79.459	Choloepus_hoffmanni
ENSCAFG00000005206	RBM17	100	94.776	ENSCPBG00000019836	RBM17	100	94.776	Chrysemys_picta_bellii
ENSCAFG00000005206	RBM17	100	47.470	ENSCSAVG00000008782	-	100	45.894	Ciona_savignyi
ENSCAFG00000005206	RBM17	98	84.949	ENSCANG00000023715	-	100	84.949	Colobus_angolensis_palliatus
ENSCAFG00000005206	RBM17	100	99.002	ENSCANG00000030987	RBM17	100	99.002	Colobus_angolensis_palliatus
ENSCAFG00000005206	RBM17	100	75.810	ENSCGRG00001009256	-	100	73.827	Cricetulus_griseus_chok1gshd
ENSCAFG00000005206	RBM17	100	98.272	ENSCGRG00001013842	Rbm17	100	98.272	Cricetulus_griseus_chok1gshd
ENSCAFG00000005206	RBM17	100	98.272	ENSCGRG00000006907	Rbm17	100	98.272	Cricetulus_griseus_crigri
ENSCAFG00000005206	RBM17	100	79.557	ENSCSEG00000018164	rbm17	100	80.296	Cynoglossus_semilaevis
ENSCAFG00000005206	RBM17	100	74.752	ENSCVAG00000002476	rbm17	100	76.098	Cyprinodon_variegatus
ENSCAFG00000005206	RBM17	100	78.588	ENSDARG00000031346	rbm17	100	78.588	Danio_rerio
ENSCAFG00000005206	RBM17	100	98.753	ENSDNOG00000035920	RBM17	100	98.753	Dasypus_novemcinctus
ENSCAFG00000005206	RBM17	99	36.203	FBgn0086683	Spf45	99	36.476	Drosophila_melanogaster
ENSCAFG00000005206	RBM17	100	74.813	ENSETEG00000006642	RBM17	100	74.813	Echinops_telfairi
ENSCAFG00000005206	RBM17	63	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSCAFG00000005206	RBM17	92	96.216	ENSEASG00005009236	-	100	96.216	Equus_asinus_asinus
ENSCAFG00000005206	RBM17	100	93.350	ENSEASG00005019205	-	100	93.350	Equus_asinus_asinus
ENSCAFG00000005206	RBM17	100	89.027	ENSECAG00000001379	-	100	89.027	Equus_caballus
ENSCAFG00000005206	RBM17	100	83.292	ENSECAG00000008939	RBM17	100	86.035	Equus_caballus
ENSCAFG00000005206	RBM17	83	90.909	ENSEEUG00000013077	RBM17	100	81.105	Erinaceus_europaeus
ENSCAFG00000005206	RBM17	100	77.315	ENSELUG00000006440	rbm17	100	77.315	Esox_lucius
ENSCAFG00000005206	RBM17	100	100.000	ENSFCAG00000031988	RBM17	100	100.000	Felis_catus
ENSCAFG00000005206	RBM17	100	94.514	ENSFALG00000001790	RBM17	100	94.514	Ficedula_albicollis
ENSCAFG00000005206	RBM17	100	98.272	ENSFDAG00000007470	RBM17	100	98.272	Fukomys_damarensis
ENSCAFG00000005206	RBM17	100	79.115	ENSFHEG00000001266	rbm17	100	78.025	Fundulus_heteroclitus
ENSCAFG00000005206	RBM17	99	75.534	ENSGMOG00000008438	rbm17	100	75.534	Gadus_morhua
ENSCAFG00000005206	RBM17	100	95.511	ENSGALG00000006332	RBM17	100	95.511	Gallus_gallus
ENSCAFG00000005206	RBM17	100	80.590	ENSGAFG00000019879	rbm17	100	81.327	Gambusia_affinis
ENSCAFG00000005206	RBM17	99	81.281	ENSGACG00000019174	rbm17	99	81.281	Gasterosteus_aculeatus
ENSCAFG00000005206	RBM17	100	94.776	ENSGAGG00000019906	RBM17	100	94.776	Gopherus_agassizii
ENSCAFG00000005206	RBM17	100	83.538	ENSHBUG00000016624	rbm17	100	83.538	Haplochromis_burtoni
ENSCAFG00000005206	RBM17	100	98.272	ENSHGLG00000011580	RBM17	100	98.272	Heterocephalus_glaber_female
ENSCAFG00000005206	RBM17	100	98.272	ENSHGLG00100010460	RBM17	100	98.272	Heterocephalus_glaber_male
ENSCAFG00000005206	RBM17	100	75.556	ENSHGLG00100010556	-	100	73.827	Heterocephalus_glaber_male
ENSCAFG00000005206	RBM17	99	78.043	ENSHCOG00000010865	rbm17	100	78.043	Hippocampus_comes
ENSCAFG00000005206	RBM17	100	77.986	ENSIPUG00000007699	Rbm17	100	77.986	Ictalurus_punctatus
ENSCAFG00000005206	RBM17	100	98.519	ENSSTOG00000013591	RBM17	100	98.519	Ictidomys_tridecemlineatus
ENSCAFG00000005206	RBM17	100	98.272	ENSJJAG00000022886	Rbm17	100	98.272	Jaculus_jaculus
ENSCAFG00000005206	RBM17	100	73.566	ENSJJAG00000000993	-	100	70.223	Jaculus_jaculus
ENSCAFG00000005206	RBM17	100	78.870	ENSKMAG00000021400	rbm17	100	79.607	Kryptolebias_marmoratus
ENSCAFG00000005206	RBM17	100	82.310	ENSLBEG00000000881	rbm17	100	79.009	Labrus_bergylta
ENSCAFG00000005206	RBM17	99	69.176	ENSLACG00000017297	RBM17	99	69.176	Latimeria_chalumnae
ENSCAFG00000005206	RBM17	100	87.160	ENSLOCG00000015659	rbm17	100	87.160	Lepisosteus_oculatus
ENSCAFG00000005206	RBM17	100	97.789	ENSLAFG00000011629	RBM17	100	97.789	Loxodonta_africana
ENSCAFG00000005206	RBM17	100	99.252	ENSMFAG00000035521	RBM17	100	99.252	Macaca_fascicularis
ENSCAFG00000005206	RBM17	100	99.252	ENSMMUG00000015152	RBM17	100	99.252	Macaca_mulatta
ENSCAFG00000005206	RBM17	100	99.252	ENSMNEG00000017264	RBM17	100	99.252	Macaca_nemestrina
ENSCAFG00000005206	RBM17	100	99.252	ENSMLEG00000029340	RBM17	100	99.252	Mandrillus_leucophaeus
ENSCAFG00000005206	RBM17	100	78.302	ENSMAMG00000000387	rbm17	100	78.302	Mastacembelus_armatus
ENSCAFG00000005206	RBM17	100	80.569	ENSMZEG00005015179	rbm17	100	80.569	Maylandia_zebra
ENSCAFG00000005206	RBM17	100	93.627	ENSMGAG00000003981	RBM17	100	93.627	Meleagris_gallopavo
ENSCAFG00000005206	RBM17	100	98.272	ENSMAUG00000019247	Rbm17	100	98.272	Mesocricetus_auratus
ENSCAFG00000005206	RBM17	100	97.531	ENSMICG00000003976	-	100	97.531	Microcebus_murinus
ENSCAFG00000005206	RBM17	100	89.976	ENSMICG00000041489	-	100	89.976	Microcebus_murinus
ENSCAFG00000005206	RBM17	100	98.272	ENSMOCG00000011847	Rbm17	100	98.272	Microtus_ochrogaster
ENSCAFG00000005206	RBM17	93	80.000	ENSMOCG00000014517	-	99	80.000	Microtus_ochrogaster
ENSCAFG00000005206	RBM17	100	75.426	ENSMMOG00000010264	rbm17	100	74.209	Mola_mola
ENSCAFG00000005206	RBM17	100	98.005	ENSMODG00000016648	RBM17	100	98.005	Monodelphis_domestica
ENSCAFG00000005206	RBM17	100	78.118	ENSMALG00000010597	rbm17	100	78.186	Monopterus_albus
ENSCAFG00000005206	RBM17	100	98.025	MGP_CAROLIEiJ_G0023173	Rbm17	100	98.025	Mus_caroli
ENSCAFG00000005206	RBM17	100	98.025	ENSMUSG00000037197	Rbm17	100	98.025	Mus_musculus
ENSCAFG00000005206	RBM17	100	97.531	MGP_PahariEiJ_G0019233	Rbm17	100	97.531	Mus_pahari
ENSCAFG00000005206	RBM17	100	98.025	MGP_SPRETEiJ_G0024091	Rbm17	100	98.025	Mus_spretus
ENSCAFG00000005206	RBM17	90	100.000	ENSMPUG00000016359	RBM17	97	99.422	Mustela_putorius_furo
ENSCAFG00000005206	RBM17	100	93.766	ENSMLUG00000025709	-	100	93.766	Myotis_lucifugus
ENSCAFG00000005206	RBM17	100	96.552	ENSMLUG00000002302	-	100	96.552	Myotis_lucifugus
ENSCAFG00000005206	RBM17	100	69.077	ENSNGAG00000000663	-	100	68.657	Nannospalax_galili
ENSCAFG00000005206	RBM17	100	98.272	ENSNGAG00000000741	Rbm17	100	98.272	Nannospalax_galili
ENSCAFG00000005206	RBM17	100	77.778	ENSNBRG00000018148	rbm17	100	77.778	Neolamprologus_brichardi
ENSCAFG00000005206	RBM17	100	99.252	ENSNLEG00000033350	RBM17	100	99.252	Nomascus_leucogenys
ENSCAFG00000005206	RBM17	100	92.020	ENSMEUG00000011347	RBM17	100	92.020	Notamacropus_eugenii
ENSCAFG00000005206	RBM17	100	85.786	ENSOPRG00000002993	RBM17	100	85.786	Ochotona_princeps
ENSCAFG00000005206	RBM17	97	74.809	ENSODEG00000007286	-	99	74.809	Octodon_degus
ENSCAFG00000005206	RBM17	100	98.030	ENSODEG00000004393	RBM17	100	98.030	Octodon_degus
ENSCAFG00000005206	RBM17	100	83.538	ENSONIG00000011838	rbm17	100	83.538	Oreochromis_niloticus
ENSCAFG00000005206	RBM17	100	96.526	ENSOANG00000015455	RBM17	100	96.526	Ornithorhynchus_anatinus
ENSCAFG00000005206	RBM17	100	79.953	ENSORLG00000028798	rbm17	100	80.590	Oryzias_latipes
ENSCAFG00000005206	RBM17	100	79.953	ENSORLG00020004593	rbm17	100	78.765	Oryzias_latipes_hni
ENSCAFG00000005206	RBM17	100	83.538	ENSORLG00015000033	rbm17	100	83.538	Oryzias_latipes_hsok
ENSCAFG00000005206	RBM17	100	79.717	ENSOMEG00000012060	rbm17	100	88.050	Oryzias_melastigma
ENSCAFG00000005206	RBM17	100	97.778	ENSOGAG00000015687	RBM17	100	97.778	Otolemur_garnettii
ENSCAFG00000005206	RBM17	100	99.252	ENSOARG00000012975	RBM17	100	99.252	Ovis_aries
ENSCAFG00000005206	RBM17	100	99.252	ENSPPAG00000032347	RBM17	100	99.252	Pan_paniscus
ENSCAFG00000005206	RBM17	100	100.000	ENSPPRG00000010706	RBM17	100	100.000	Panthera_pardus
ENSCAFG00000005206	RBM17	100	100.000	ENSPTIG00000007596	RBM17	100	100.000	Panthera_tigris_altaica
ENSCAFG00000005206	RBM17	100	99.252	ENSPTRG00000002265	RBM17	100	99.252	Pan_troglodytes
ENSCAFG00000005206	RBM17	100	99.252	ENSPANG00000023425	RBM17	100	99.252	Papio_anubis
ENSCAFG00000005206	RBM17	100	80.706	ENSPKIG00000025526	rbm17	100	80.516	Paramormyrops_kingsleyae
ENSCAFG00000005206	RBM17	100	77.934	ENSPKIG00000005048	-	100	77.934	Paramormyrops_kingsleyae
ENSCAFG00000005206	RBM17	100	93.333	ENSPSIG00000012332	RBM17	100	93.333	Pelodiscus_sinensis
ENSCAFG00000005206	RBM17	100	78.025	ENSPMGG00000007980	rbm17	100	76.942	Periophthalmus_magnuspinnatus
ENSCAFG00000005206	RBM17	100	98.272	ENSPEMG00000014320	Rbm17	100	98.272	Peromyscus_maniculatus_bairdii
ENSCAFG00000005206	RBM17	100	97.767	ENSPCIG00000019260	-	100	97.767	Phascolarctos_cinereus
ENSCAFG00000005206	RBM17	100	78.774	ENSPFOG00000013271	rbm17	100	78.774	Poecilia_formosa
ENSCAFG00000005206	RBM17	100	78.302	ENSPLAG00000004455	rbm17	100	79.009	Poecilia_latipinna
ENSCAFG00000005206	RBM17	100	81.327	ENSPMEG00000014864	rbm17	100	82.064	Poecilia_mexicana
ENSCAFG00000005206	RBM17	100	77.396	ENSPREG00000015589	rbm17	100	78.066	Poecilia_reticulata
ENSCAFG00000005206	RBM17	100	99.252	ENSPPYG00000002067	RBM17	100	99.252	Pongo_abelii
ENSCAFG00000005206	RBM17	99	72.180	ENSPPYG00000019881	-	100	71.930	Pongo_abelii
ENSCAFG00000005206	RBM17	90	70.968	ENSPPYG00000019042	-	100	70.898	Pongo_abelii
ENSCAFG00000005206	RBM17	100	91.272	ENSPCAG00000016879	RBM17	100	91.272	Procavia_capensis
ENSCAFG00000005206	RBM17	100	98.753	ENSPCOG00000027881	RBM17	100	98.753	Propithecus_coquereli
ENSCAFG00000005206	RBM17	100	88.279	ENSPVAG00000015499	RBM17	100	86.783	Pteropus_vampyrus
ENSCAFG00000005206	RBM17	100	76.368	ENSPNYG00000015274	rbm17	100	76.368	Pundamilia_nyererei
ENSCAFG00000005206	RBM17	100	79.765	ENSPNAG00000030046	rbm17	100	79.765	Pygocentrus_nattereri
ENSCAFG00000005206	RBM17	100	98.272	ENSRNOG00000018767	Rbm17	100	98.272	Rattus_norvegicus
ENSCAFG00000005206	RBM17	100	99.252	ENSRBIG00000043727	RBM17	100	99.252	Rhinopithecus_bieti
ENSCAFG00000005206	RBM17	100	99.252	ENSRROG00000044142	RBM17	100	99.252	Rhinopithecus_roxellana
ENSCAFG00000005206	RBM17	100	88.308	ENSSBOG00000023653	-	100	88.308	Saimiri_boliviensis_boliviensis
ENSCAFG00000005206	RBM17	100	99.002	ENSSBOG00000031661	-	100	99.002	Saimiri_boliviensis_boliviensis
ENSCAFG00000005206	RBM17	100	98.005	ENSSHAG00000012480	-	100	98.005	Sarcophilus_harrisii
ENSCAFG00000005206	RBM17	100	83.047	ENSSFOG00015009892	rbm17	100	83.047	Scleropages_formosus
ENSCAFG00000005206	RBM17	100	78.960	ENSSMAG00000012368	rbm17	100	78.109	Scophthalmus_maximus
ENSCAFG00000005206	RBM17	100	82.082	ENSSDUG00000015015	rbm17	100	82.082	Seriola_dumerili
ENSCAFG00000005206	RBM17	100	82.082	ENSSLDG00000014486	rbm17	100	82.082	Seriola_lalandi_dorsalis
ENSCAFG00000005206	RBM17	67	78.261	ENSSARG00000001792	-	100	78.814	Sorex_araneus
ENSCAFG00000005206	RBM17	99	94.763	ENSSPUG00000001036	RBM17	99	94.763	Sphenodon_punctatus
ENSCAFG00000005206	RBM17	100	82.801	ENSSPAG00000002338	rbm17	100	82.801	Stegastes_partitus
ENSCAFG00000005206	RBM17	100	99.002	ENSSSCG00000011134	RBM17	100	99.002	Sus_scrofa
ENSCAFG00000005206	RBM17	100	93.827	ENSTGUG00000002013	RBM17	100	93.827	Taeniopygia_guttata
ENSCAFG00000005206	RBM17	100	82.759	ENSTRUG00000010698	rbm17	100	82.759	Takifugu_rubripes
ENSCAFG00000005206	RBM17	100	82.641	ENSTNIG00000006892	rbm17	100	82.641	Tetraodon_nigroviridis
ENSCAFG00000005206	RBM17	90	89.677	ENSTBEG00000014686	RBM17	100	77.556	Tupaia_belangeri
ENSCAFG00000005206	RBM17	90	99.167	ENSTTRG00000001344	RBM17	100	99.167	Tursiops_truncatus
ENSCAFG00000005206	RBM17	100	95.511	ENSUAMG00000009499	RBM17	100	95.511	Ursus_americanus
ENSCAFG00000005206	RBM17	100	99.751	ENSUMAG00000012237	RBM17	100	99.751	Ursus_maritimus
ENSCAFG00000005206	RBM17	100	84.788	ENSVPAG00000005497	RBM17	100	84.788	Vicugna_pacos
ENSCAFG00000005206	RBM17	100	100.000	ENSVVUG00000006780	RBM17	100	100.000	Vulpes_vulpes
ENSCAFG00000005206	RBM17	99	86.070	ENSXETG00000018123	rbm17	100	86.070	Xenopus_tropicalis
ENSCAFG00000005206	RBM17	100	80.590	ENSXMAG00000008674	rbm17	100	81.327	Xiphophorus_maculatus