EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000005547 (Gene tree)
Gene ID: 608803
Gene Symbol: RBFOX3
Alias: -
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 11919 bases
Position: chr9:2362342-2374260
Accession: 45400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000008287	Fox-1_C	PF12414.8	3e-45	1	1
ENSCAFP00000042800	Fox-1_C	PF12414.8	5e-45	1	1
ENSCAFP00000008287	RRM_1	PF00076.22	3.5e-19	1	1
ENSCAFP00000042800	RRM_1	PF00076.22	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000008934	-	840	XM_005624033	ENSCAFP00000008287	279 (aa)	XP_005624091	F1PJX5
ENSCAFT00000046179	-	972	-	ENSCAFP00000042800	314 (aa)	-	J9PAH3

Gene Model

Click here to download ENSCAFG00000005547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000005547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000005547	RBFOX3	100	69.032	ENSCAFG00000019082	RBFOX1	74	67.097
ENSCAFG00000005547	RBFOX3	99	59.938	ENSCAFG00000001701	RBFOX2	74	61.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000005547	RBFOX3	85	99.160	ENSG00000167281	RBFOX3	89	100.000	Homo_sapiens
ENSCAFG00000005547	RBFOX3	90	74.609	ENSAPOG00000015658	-	72	74.104	Acanthochromis_polyacanthus
ENSCAFG00000005547	RBFOX3	99	79.286	ENSAPOG00000021630	rbfox3b	65	84.583	Acanthochromis_polyacanthus
ENSCAFG00000005547	RBFOX3	100	88.255	ENSAMEG00000014170	RBFOX3	76	88.255	Ailuropoda_melanoleuca
ENSCAFG00000005547	RBFOX3	80	73.251	ENSACIG00000003768	-	59	77.990	Amphilophus_citrinellus
ENSCAFG00000005547	RBFOX3	85	81.328	ENSACIG00000010817	rbfox3b	75	78.838	Amphilophus_citrinellus
ENSCAFG00000005547	RBFOX3	85	87.448	ENSAOCG00000012358	rbfox3b	65	84.583	Amphiprion_ocellaris
ENSCAFG00000005547	RBFOX3	98	75.812	ENSAOCG00000010786	-	65	81.275	Amphiprion_ocellaris
ENSCAFG00000005547	RBFOX3	85	74.689	ENSAPEG00000019081	rbfox3b	63	73.444	Amphiprion_percula
ENSCAFG00000005547	RBFOX3	98	69.900	ENSAPEG00000015891	-	68	72.563	Amphiprion_percula
ENSCAFG00000005547	RBFOX3	86	84.232	ENSATEG00000023101	-	79	79.845	Anabas_testudineus
ENSCAFG00000005547	RBFOX3	85	74.539	ENSATEG00000019945	rbfox3b	79	75.368	Anabas_testudineus
ENSCAFG00000005547	RBFOX3	85	94.142	ENSACAG00000016093	RBFOX3	67	94.142	Anolis_carolinensis
ENSCAFG00000005547	RBFOX3	85	97.479	ENSANAG00000023457	RBFOX3	76	97.479	Aotus_nancymaae
ENSCAFG00000005547	RBFOX3	100	79.570	ENSACLG00000020011	rbfox3b	80	85.141	Astatotilapia_calliptera
ENSCAFG00000005547	RBFOX3	85	87.917	ENSACLG00000025552	-	65	89.583	Astatotilapia_calliptera
ENSCAFG00000005547	RBFOX3	88	86.747	ENSAMXG00000037246	rbfox3a	73	91.322	Astyanax_mexicanus
ENSCAFG00000005547	RBFOX3	85	84.583	ENSAMXG00000042841	rbfox3b	68	81.250	Astyanax_mexicanus
ENSCAFG00000005547	RBFOX3	76	99.061	ENSBTAG00000006280	RBFOX3	58	99.061	Bos_taurus
ENSCAFG00000005547	RBFOX3	92	85.271	ENSCJAG00000009563	RBFOX3	72	90.244	Callithrix_jacchus
ENSCAFG00000005547	RBFOX3	95	86.377	ENSCAFG00020008126	RBFOX3	82	86.377	Canis_lupus_dingo
ENSCAFG00000005547	RBFOX3	100	76.994	ENSCHIG00000009124	RBFOX3	76	83.158	Capra_hircus
ENSCAFG00000005547	RBFOX3	85	82.456	ENSTSYG00000029617	RBFOX3	79	82.456	Carlito_syrichta
ENSCAFG00000005547	RBFOX3	100	75.380	ENSCPOG00000021703	RBFOX3	80	81.250	Cavia_porcellus
ENSCAFG00000005547	RBFOX3	85	97.479	ENSCCAG00000028450	RBFOX3	76	97.479	Cebus_capucinus
ENSCAFG00000005547	RBFOX3	85	99.160	ENSCATG00000018349	RBFOX3	76	99.160	Cercocebus_atys
ENSCAFG00000005547	RBFOX3	100	76.147	ENSCLAG00000006449	RBFOX3	79	82.168	Chinchilla_lanigera
ENSCAFG00000005547	RBFOX3	85	99.160	ENSCSAG00000002355	RBFOX3	76	99.160	Chlorocebus_sabaeus
ENSCAFG00000005547	RBFOX3	100	84.946	ENSCPBG00000010904	RBFOX3	76	91.176	Chrysemys_picta_bellii
ENSCAFG00000005547	RBFOX3	85	99.160	ENSCANG00000043120	RBFOX3	76	99.160	Colobus_angolensis_palliatus
ENSCAFG00000005547	RBFOX3	100	71.646	ENSCGRG00001019476	Rbfox3	80	78.049	Cricetulus_griseus_chok1gshd
ENSCAFG00000005547	RBFOX3	100	71.646	ENSCGRG00000003268	Rbfox3	80	78.049	Cricetulus_griseus_crigri
ENSCAFG00000005547	RBFOX3	85	75.417	ENSCSEG00000020606	RBFOX3	69	72.083	Cynoglossus_semilaevis
ENSCAFG00000005547	RBFOX3	99	78.648	ENSCSEG00000015567	RBFOX3	76	75.704	Cynoglossus_semilaevis
ENSCAFG00000005547	RBFOX3	85	87.448	ENSCVAG00000006882	rbfox3b	65	84.583	Cyprinodon_variegatus
ENSCAFG00000005547	RBFOX3	99	66.547	ENSDARG00000074310	rbfox3b	97	72.124	Danio_rerio
ENSCAFG00000005547	RBFOX3	85	87.603	ENSDARG00000010083	rbfox3a	74	90.496	Danio_rerio
ENSCAFG00000005547	RBFOX3	86	79.720	ENSDNOG00000039391	RBFOX3	78	77.397	Dasypus_novemcinctus
ENSCAFG00000005547	RBFOX3	85	71.378	ENSDORG00000005352	Rbfox3	77	74.380	Dipodomys_ordii
ENSCAFG00000005547	RBFOX3	68	72.396	ENSEBUG00000013559	RBFOX3	53	72.396	Eptatretus_burgeri
ENSCAFG00000005547	RBFOX3	100	69.831	ENSEBUG00000002129	RBFOX3	72	76.471	Eptatretus_burgeri
ENSCAFG00000005547	RBFOX3	85	98.750	ENSEASG00005005059	RBFOX3	76	98.750	Equus_asinus_asinus
ENSCAFG00000005547	RBFOX3	85	98.750	ENSECAG00000023811	RBFOX3	76	98.750	Equus_caballus
ENSCAFG00000005547	RBFOX3	87	95.489	ENSEEUG00000013974	RBFOX3	56	95.489	Erinaceus_europaeus
ENSCAFG00000005547	RBFOX3	99	79.004	ENSELUG00000017963	rbfox3b	65	83.750	Esox_lucius
ENSCAFG00000005547	RBFOX3	100	88.530	ENSFCAG00000002555	RBFOX3	76	97.899	Felis_catus
ENSCAFG00000005547	RBFOX3	100	68.810	ENSFALG00000012288	RBFOX3	77	68.810	Ficedula_albicollis
ENSCAFG00000005547	RBFOX3	100	68.693	ENSFDAG00000007489	RBFOX3	78	75.347	Fukomys_damarensis
ENSCAFG00000005547	RBFOX3	85	74.895	ENSFHEG00000008550	rbfox3b	74	72.083	Fundulus_heteroclitus
ENSCAFG00000005547	RBFOX3	99	66.768	ENSGMOG00000019304	-	87	69.204	Gadus_morhua
ENSCAFG00000005547	RBFOX3	88	95.510	ENSGALG00000032889	RBFOX3	67	97.059	Gallus_gallus
ENSCAFG00000005547	RBFOX3	85	85.774	ENSGAFG00000005025	rbfox3b	69	84.583	Gambusia_affinis
ENSCAFG00000005547	RBFOX3	100	66.465	ENSGACG00000002138	-	76	73.103	Gasterosteus_aculeatus
ENSCAFG00000005547	RBFOX3	100	85.305	ENSGAGG00000020025	RBFOX3	76	91.597	Gopherus_agassizii
ENSCAFG00000005547	RBFOX3	85	99.160	ENSGGOG00000012546	RBFOX3	76	99.160	Gorilla_gorilla
ENSCAFG00000005547	RBFOX3	99	79.004	ENSHBUG00000023098	-	69	88.797	Haplochromis_burtoni
ENSCAFG00000005547	RBFOX3	100	79.570	ENSHBUG00000018099	rbfox3b	66	84.583	Haplochromis_burtoni
ENSCAFG00000005547	RBFOX3	100	75.227	ENSHGLG00000008679	RBFOX3	80	81.034	Heterocephalus_glaber_female
ENSCAFG00000005547	RBFOX3	100	69.789	ENSHGLG00100014739	RBFOX3	77	75.945	Heterocephalus_glaber_male
ENSCAFG00000005547	RBFOX3	86	76.230	ENSHCOG00000001863	RBFOX3	73	72.510	Hippocampus_comes
ENSCAFG00000005547	RBFOX3	85	81.857	ENSHCOG00000007444	RBFOX3	62	82.008	Hippocampus_comes
ENSCAFG00000005547	RBFOX3	85	69.259	ENSIPUG00000021966	rbfox3b	67	86.441	Ictalurus_punctatus
ENSCAFG00000005547	RBFOX3	100	80.212	ENSIPUG00000012010	rbfox3a	73	90.496	Ictalurus_punctatus
ENSCAFG00000005547	RBFOX3	100	66.549	ENSSTOG00000026817	RBFOX3	75	71.193	Ictidomys_tridecemlineatus
ENSCAFG00000005547	RBFOX3	100	76.074	ENSJJAG00000014167	Rbfox3	79	82.105	Jaculus_jaculus
ENSCAFG00000005547	RBFOX3	96	77.985	ENSKMAG00000006726	rbfox3b	65	84.583	Kryptolebias_marmoratus
ENSCAFG00000005547	RBFOX3	85	90.909	ENSLBEG00000022508	-	66	90.909	Labrus_bergylta
ENSCAFG00000005547	RBFOX3	99	79.286	ENSLBEG00000004030	rbfox3b	75	78.838	Labrus_bergylta
ENSCAFG00000005547	RBFOX3	100	74.026	ENSLACG00000018409	-	78	74.026	Latimeria_chalumnae
ENSCAFG00000005547	RBFOX3	85	88.430	ENSLOCG00000012267	rbfox3a	73	91.322	Lepisosteus_oculatus
ENSCAFG00000005547	RBFOX3	100	81.494	ENSLAFG00000016623	RBFOX3	77	81.494	Loxodonta_africana
ENSCAFG00000005547	RBFOX3	100	70.552	ENSMFAG00000002247	RBFOX3	79	82.746	Macaca_fascicularis
ENSCAFG00000005547	RBFOX3	85	99.160	ENSMMUG00000023028	RBFOX3	76	99.160	Macaca_mulatta
ENSCAFG00000005547	RBFOX3	85	98.739	ENSMNEG00000041147	RBFOX3	76	98.739	Macaca_nemestrina
ENSCAFG00000005547	RBFOX3	85	99.160	ENSMLEG00000025686	RBFOX3	76	99.160	Mandrillus_leucophaeus
ENSCAFG00000005547	RBFOX3	84	83.262	ENSMAMG00000019810	rbfox3b	81	76.800	Mastacembelus_armatus
ENSCAFG00000005547	RBFOX3	100	78.445	ENSMAMG00000020600	-	76	75.524	Mastacembelus_armatus
ENSCAFG00000005547	RBFOX3	76	61.066	ENSMZEG00005003055	-	59	89.630	Maylandia_zebra
ENSCAFG00000005547	RBFOX3	100	79.570	ENSMZEG00005000781	rbfox3b	69	82.329	Maylandia_zebra
ENSCAFG00000005547	RBFOX3	100	73.476	ENSMAUG00000013543	Rbfox3	80	77.352	Mesocricetus_auratus
ENSCAFG00000005547	RBFOX3	85	98.739	ENSMICG00000014898	RBFOX3	77	98.739	Microcebus_murinus
ENSCAFG00000005547	RBFOX3	100	72.171	ENSMOCG00000015373	Rbfox3	79	78.671	Microtus_ochrogaster
ENSCAFG00000005547	RBFOX3	100	74.828	ENSMMOG00000020193	rbfox3b	76	74.825	Mola_mola
ENSCAFG00000005547	RBFOX3	85	96.218	ENSMODG00000002089	RBFOX3	67	96.218	Monodelphis_domestica
ENSCAFG00000005547	RBFOX3	100	79.859	ENSMALG00000018270	-	66	90.083	Monopterus_albus
ENSCAFG00000005547	RBFOX3	85	87.815	ENSMALG00000020407	rbfox3b	65	84.583	Monopterus_albus
ENSCAFG00000005547	RBFOX3	100	83.929	MGP_CAROLIEiJ_G0017487	Rbfox3	96	94.245	Mus_caroli
ENSCAFG00000005547	RBFOX3	100	85.357	ENSMUSG00000025576	Rbfox3	96	94.245	Mus_musculus
ENSCAFG00000005547	RBFOX3	100	87.189	MGP_PahariEiJ_G0018614	Rbfox3	96	94.964	Mus_pahari
ENSCAFG00000005547	RBFOX3	100	87.143	MGP_SPRETEiJ_G0018331	Rbfox3	96	94.245	Mus_spretus
ENSCAFG00000005547	RBFOX3	100	79.430	ENSMPUG00000012319	RBFOX3	72	85.870	Mustela_putorius_furo
ENSCAFG00000005547	RBFOX3	100	73.089	ENSNGAG00000018006	Rbfox3	79	81.469	Nannospalax_galili
ENSCAFG00000005547	RBFOX3	81	89.381	ENSNBRG00000010102	rbfox3b	68	82.329	Neolamprologus_brichardi
ENSCAFG00000005547	RBFOX3	86	79.339	ENSNBRG00000022885	-	66	78.926	Neolamprologus_brichardi
ENSCAFG00000005547	RBFOX3	86	63.071	ENSNLEG00000000153	-	75	61.154	Nomascus_leucogenys
ENSCAFG00000005547	RBFOX3	73	99.038	ENSOPRG00000016279	-	54	99.038	Ochotona_princeps
ENSCAFG00000005547	RBFOX3	85	98.326	ENSODEG00000009433	RBFOX3	76	98.326	Octodon_degus
ENSCAFG00000005547	RBFOX3	85	87.448	ENSONIG00000009549	rbfox3b	65	84.583	Oreochromis_niloticus
ENSCAFG00000005547	RBFOX3	85	88.333	ENSONIG00000007282	-	74	86.220	Oreochromis_niloticus
ENSCAFG00000005547	RBFOX3	85	70.107	ENSOCUG00000014217	RBFOX3	80	66.782	Oryctolagus_cuniculus
ENSCAFG00000005547	RBFOX3	100	79.787	ENSORLG00000000905	rbfox3b	52	84.647	Oryzias_latipes
ENSCAFG00000005547	RBFOX3	99	79.715	ENSORLG00020018030	rbfox3b	66	84.298	Oryzias_latipes_hni
ENSCAFG00000005547	RBFOX3	100	79.433	ENSORLG00015009200	rbfox3b	66	83.884	Oryzias_latipes_hsok
ENSCAFG00000005547	RBFOX3	59	87.500	ENSOMEG00000014677	rbfox3b	55	70.811	Oryzias_melastigma
ENSCAFG00000005547	RBFOX3	100	88.732	ENSOGAG00000029595	RBFOX3	74	88.732	Otolemur_garnettii
ENSCAFG00000005547	RBFOX3	100	73.597	ENSOARG00000002908	RBFOX3	78	74.587	Ovis_aries
ENSCAFG00000005547	RBFOX3	76	99.052	ENSPPAG00000025383	RBFOX3	74	99.052	Pan_paniscus
ENSCAFG00000005547	RBFOX3	85	83.453	ENSPPRG00000007819	RBFOX3	79	83.453	Panthera_pardus
ENSCAFG00000005547	RBFOX3	85	99.160	ENSPTRG00000009727	RBFOX3	76	99.160	Pan_troglodytes
ENSCAFG00000005547	RBFOX3	85	99.160	ENSPANG00000019837	RBFOX3	76	99.160	Papio_anubis
ENSCAFG00000005547	RBFOX3	93	73.077	ENSPKIG00000022633	-	62	78.082	Paramormyrops_kingsleyae
ENSCAFG00000005547	RBFOX3	100	81.625	ENSPKIG00000010299	rbfox3a	70	78.445	Paramormyrops_kingsleyae
ENSCAFG00000005547	RBFOX3	68	88.660	ENSPMGG00000008000	rbfox3b	60	88.660	Periophthalmus_magnuspinnatus
ENSCAFG00000005547	RBFOX3	100	72.171	ENSPEMG00000010500	Rbfox3	79	78.671	Peromyscus_maniculatus_bairdii
ENSCAFG00000005547	RBFOX3	77	66.667	ENSPMAG00000008689	rbfox3b	93	76.842	Petromyzon_marinus
ENSCAFG00000005547	RBFOX3	85	83.193	ENSPCIG00000005766	RBFOX3	80	80.000	Phascolarctos_cinereus
ENSCAFG00000005547	RBFOX3	99	79.286	ENSPFOG00000018294	rbfox3b	63	84.583	Poecilia_formosa
ENSCAFG00000005547	RBFOX3	100	74.468	ENSPLAG00000000481	rbfox3b	75	78.776	Poecilia_latipinna
ENSCAFG00000005547	RBFOX3	85	74.895	ENSPMEG00000022997	rbfox3b	74	72.083	Poecilia_mexicana
ENSCAFG00000005547	RBFOX3	85	87.448	ENSPREG00000012886	rbfox3b	69	84.647	Poecilia_reticulata
ENSCAFG00000005547	RBFOX3	100	75.986	ENSPPYG00000008704	RBFOX3	61	90.521	Pongo_abelii
ENSCAFG00000005547	RBFOX3	85	78.169	ENSPCAG00000001401	RBFOX3	79	79.225	Procavia_capensis
ENSCAFG00000005547	RBFOX3	98	76.398	ENSPCOG00000012689	RBFOX3	80	82.746	Propithecus_coquereli
ENSCAFG00000005547	RBFOX3	85	69.825	ENSPVAG00000015243	RBFOX3	83	68.896	Pteropus_vampyrus
ENSCAFG00000005547	RBFOX3	86	71.901	ENSPNYG00000010414	rbfox3b	67	68.359	Pundamilia_nyererei
ENSCAFG00000005547	RBFOX3	89	77.470	ENSPNYG00000009079	-	65	77.075	Pundamilia_nyererei
ENSCAFG00000005547	RBFOX3	82	70.435	ENSPNAG00000018173	rbfox3b	70	64.919	Pygocentrus_nattereri
ENSCAFG00000005547	RBFOX3	100	79.859	ENSPNAG00000002889	rbfox3a	66	90.909	Pygocentrus_nattereri
ENSCAFG00000005547	RBFOX3	85	96.250	ENSRNOG00000003386	Rbfox3	76	96.250	Rattus_norvegicus
ENSCAFG00000005547	RBFOX3	85	99.160	ENSRBIG00000040449	RBFOX3	66	99.160	Rhinopithecus_bieti
ENSCAFG00000005547	RBFOX3	85	99.160	ENSRROG00000000766	RBFOX3	76	99.160	Rhinopithecus_roxellana
ENSCAFG00000005547	RBFOX3	85	97.479	ENSSBOG00000031591	RBFOX3	76	97.479	Saimiri_boliviensis_boliviensis
ENSCAFG00000005547	RBFOX3	100	79.299	ENSSHAG00000016076	RBFOX3	79	79.048	Sarcophilus_harrisii
ENSCAFG00000005547	RBFOX3	100	79.859	ENSSFOG00015023260	rbfox3a	66	90.909	Scleropages_formosus
ENSCAFG00000005547	RBFOX3	84	81.277	ENSSFOG00015004716	RBFOX3	68	78.723	Scleropages_formosus
ENSCAFG00000005547	RBFOX3	85	88.333	ENSSMAG00000019052	-	77	88.333	Scophthalmus_maximus
ENSCAFG00000005547	RBFOX3	100	79.433	ENSSMAG00000012618	rbfox3b	55	84.711	Scophthalmus_maximus
ENSCAFG00000005547	RBFOX3	85	74.895	ENSSDUG00000023183	rbfox3b	74	72.083	Seriola_dumerili
ENSCAFG00000005547	RBFOX3	100	76.573	ENSSDUG00000015801	-	74	76.573	Seriola_dumerili
ENSCAFG00000005547	RBFOX3	85	87.448	ENSSLDG00000000149	rbfox3b	65	84.583	Seriola_lalandi_dorsalis
ENSCAFG00000005547	RBFOX3	100	77.739	ENSSLDG00000016098	-	74	75.874	Seriola_lalandi_dorsalis
ENSCAFG00000005547	RBFOX3	85	94.561	ENSSPUG00000011733	RBFOX3	76	91.701	Sphenodon_punctatus
ENSCAFG00000005547	RBFOX3	85	74.689	ENSSPAG00000017571	rbfox3b	63	71.901	Stegastes_partitus
ENSCAFG00000005547	RBFOX3	76	82.791	ENSSPAG00000004898	-	60	80.097	Stegastes_partitus
ENSCAFG00000005547	RBFOX3	86	97.934	ENSSSCG00000039498	RBFOX3	78	95.312	Sus_scrofa
ENSCAFG00000005547	RBFOX3	100	73.776	ENSTRUG00000004894	rbfox3b	69	79.675	Takifugu_rubripes
ENSCAFG00000005547	RBFOX3	99	71.795	ENSTNIG00000011278	rbfox3b	78	69.649	Tetraodon_nigroviridis
ENSCAFG00000005547	RBFOX3	92	54.785	ENSTBEG00000004296	-	74	52.145	Tupaia_belangeri
ENSCAFG00000005547	RBFOX3	85	76.056	ENSTTRG00000003676	RBFOX3	79	76.056	Tursiops_truncatus
ENSCAFG00000005547	RBFOX3	85	98.739	ENSUAMG00000004668	RBFOX3	76	98.739	Ursus_americanus
ENSCAFG00000005547	RBFOX3	95	100.000	ENSVVUG00000017864	RBFOX3	80	100.000	Vulpes_vulpes
ENSCAFG00000005547	RBFOX3	99	66.667	ENSXETG00000020236	rbfox3	76	64.590	Xenopus_tropicalis
ENSCAFG00000005547	RBFOX3	85	85.417	ENSXCOG00000018262	rbfox3b	75	77.406	Xiphophorus_couchianus
ENSCAFG00000005547	RBFOX3	99	79.286	ENSXMAG00000012939	rbfox3b	65	84.583	Xiphophorus_maculatus