EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000005670 (Gene tree)
Gene ID: 609234
Gene Symbol: RIF1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 48935 bases
Position: chr19:52660493-52709427
Accession: 45575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000008476	Rif1_N	PF12231.8	1.8e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000009138	-	8460	XM_003639706	ENSCAFP00000008476	2549 (aa)	XP_003639754	F1PT44

Gene Model

Click here to download ENSCAFG00000005670's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000005670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000005670	RIF1	97	78.439	ENSG00000080345	RIF1	97	88.808	Homo_sapiens
ENSCAFG00000005670	RIF1	97	88.401	ENSAMEG00000008461	RIF1	100	88.361	Ailuropoda_melanoleuca
ENSCAFG00000005670	RIF1	62	50.656	ENSACIG00000017765	rif1	70	50.541	Amphilophus_citrinellus
ENSCAFG00000005670	RIF1	63	48.933	ENSAOCG00000017231	rif1	66	47.826	Amphiprion_ocellaris
ENSCAFG00000005670	RIF1	63	55.216	ENSAPEG00000013228	rif1	65	55.216	Amphiprion_percula
ENSCAFG00000005670	RIF1	67	48.060	ENSATEG00000022887	rif1	71	47.908	Anabas_testudineus
ENSCAFG00000005670	RIF1	81	66.667	ENSAPLG00000007092	RIF1	97	66.667	Anas_platyrhynchos
ENSCAFG00000005670	RIF1	81	57.514	ENSACAG00000003714	RIF1	90	57.514	Anolis_carolinensis
ENSCAFG00000005670	RIF1	97	77.434	ENSANAG00000024840	RIF1	100	77.465	Aotus_nancymaae
ENSCAFG00000005670	RIF1	91	81.384	ENSBTAG00000021020	RIF1	100	81.384	Bos_taurus
ENSCAFG00000005670	RIF1	97	77.192	ENSCJAG00000003138	RIF1	100	76.942	Callithrix_jacchus
ENSCAFG00000005670	RIF1	97	98.178	ENSCAFG00020016401	RIF1	100	98.178	Canis_lupus_dingo
ENSCAFG00000005670	RIF1	97	80.912	ENSCHIG00000020327	RIF1	100	80.912	Capra_hircus
ENSCAFG00000005670	RIF1	97	76.187	ENSTSYG00000008861	RIF1	100	76.146	Carlito_syrichta
ENSCAFG00000005670	RIF1	78	75.545	ENSCAPG00000008957	RIF1	96	75.545	Cavia_aperea
ENSCAFG00000005670	RIF1	96	69.701	ENSCPOG00000037898	RIF1	99	69.747	Cavia_porcellus
ENSCAFG00000005670	RIF1	97	76.419	ENSCCAG00000024760	RIF1	100	76.490	Cebus_capucinus
ENSCAFG00000005670	RIF1	97	79.011	ENSCATG00000033353	RIF1	100	78.922	Cercocebus_atys
ENSCAFG00000005670	RIF1	93	72.860	ENSCLAG00000001517	RIF1	99	72.837	Chinchilla_lanigera
ENSCAFG00000005670	RIF1	97	78.721	ENSCSAG00000016089	RIF1	100	78.721	Chlorocebus_sabaeus
ENSCAFG00000005670	RIF1	94	73.999	ENSCHOG00000007187	RIF1	97	73.999	Choloepus_hoffmanni
ENSCAFG00000005670	RIF1	87	71.302	ENSCPBG00000025885	RIF1	97	72.485	Chrysemys_picta_bellii
ENSCAFG00000005670	RIF1	97	77.563	ENSCANG00000028962	RIF1	100	78.352	Colobus_angolensis_palliatus
ENSCAFG00000005670	RIF1	97	68.112	ENSCGRG00001024589	Rif1	100	68.554	Cricetulus_griseus_chok1gshd
ENSCAFG00000005670	RIF1	95	69.369	ENSCGRG00000010713	Rif1	100	69.817	Cricetulus_griseus_crigri
ENSCAFG00000005670	RIF1	60	54.651	ENSCSEG00000003945	rif1	67	54.651	Cynoglossus_semilaevis
ENSCAFG00000005670	RIF1	62	49.258	ENSCVAG00000022479	rif1	68	49.258	Cyprinodon_variegatus
ENSCAFG00000005670	RIF1	64	49.493	ENSDARG00000062650	rif1	68	49.611	Danio_rerio
ENSCAFG00000005670	RIF1	99	74.824	ENSDNOG00000011194	RIF1	99	74.599	Dasypus_novemcinctus
ENSCAFG00000005670	RIF1	92	72.231	ENSETEG00000012421	RIF1	94	72.231	Echinops_telfairi
ENSCAFG00000005670	RIF1	90	94.667	ENSEASG00005023434	RIF1	99	94.667	Equus_asinus_asinus
ENSCAFG00000005670	RIF1	94	91.239	ENSECAG00000012679	RIF1	100	91.239	Equus_caballus
ENSCAFG00000005670	RIF1	64	48.310	ENSELUG00000006826	rif1	58	48.325	Esox_lucius
ENSCAFG00000005670	RIF1	97	86.565	ENSFCAG00000029742	RIF1	100	86.565	Felis_catus
ENSCAFG00000005670	RIF1	75	63.720	ENSFALG00000013874	RIF1	91	63.720	Ficedula_albicollis
ENSCAFG00000005670	RIF1	97	73.903	ENSFDAG00000006538	RIF1	99	73.761	Fukomys_damarensis
ENSCAFG00000005670	RIF1	60	50.283	ENSFHEG00000013721	rif1	66	50.080	Fundulus_heteroclitus
ENSCAFG00000005670	RIF1	52	50.420	ENSGMOG00000003517	rif1	82	50.420	Gadus_morhua
ENSCAFG00000005670	RIF1	77	67.059	ENSGALG00000012484	RIF1	91	67.059	Gallus_gallus
ENSCAFG00000005670	RIF1	63	54.211	ENSGAFG00000017196	rif1	73	53.988	Gambusia_affinis
ENSCAFG00000005670	RIF1	57	54.286	ENSGACG00000008579	rif1	66	53.815	Gasterosteus_aculeatus
ENSCAFG00000005670	RIF1	82	70.871	ENSGAGG00000012595	RIF1	98	72.072	Gopherus_agassizii
ENSCAFG00000005670	RIF1	87	88.143	ENSGGOG00000040178	RIF1	96	88.269	Gorilla_gorilla
ENSCAFG00000005670	RIF1	92	73.682	ENSHGLG00100009807	RIF1	99	73.617	Heterocephalus_glaber_male
ENSCAFG00000005670	RIF1	63	48.562	ENSHCOG00000015943	rif1	62	48.576	Hippocampus_comes
ENSCAFG00000005670	RIF1	97	76.230	ENSSTOG00000020712	RIF1	100	76.421	Ictidomys_tridecemlineatus
ENSCAFG00000005670	RIF1	97	68.330	ENSJJAG00000023000	Rif1	100	68.169	Jaculus_jaculus
ENSCAFG00000005670	RIF1	62	49.254	ENSKMAG00000002852	rif1	67	49.254	Kryptolebias_marmoratus
ENSCAFG00000005670	RIF1	66	49.843	ENSLBEG00000023196	rif1	59	49.843	Labrus_bergylta
ENSCAFG00000005670	RIF1	82	62.647	ENSLACG00000005425	RIF1	89	62.647	Latimeria_chalumnae
ENSCAFG00000005670	RIF1	60	52.811	ENSLOCG00000002657	rif1	69	52.573	Lepisosteus_oculatus
ENSCAFG00000005670	RIF1	97	76.622	ENSLAFG00000009796	RIF1	100	76.501	Loxodonta_africana
ENSCAFG00000005670	RIF1	97	78.850	ENSMFAG00000032233	RIF1	100	78.761	Macaca_fascicularis
ENSCAFG00000005670	RIF1	97	78.810	ENSMMUG00000008611	RIF1	100	78.721	Macaca_mulatta
ENSCAFG00000005670	RIF1	97	78.842	ENSMNEG00000031616	RIF1	100	78.842	Macaca_nemestrina
ENSCAFG00000005670	RIF1	97	79.172	ENSMLEG00000042945	RIF1	100	79.083	Mandrillus_leucophaeus
ENSCAFG00000005670	RIF1	70	48.808	ENSMAMG00000001745	rif1	73	48.808	Mastacembelus_armatus
ENSCAFG00000005670	RIF1	62	51.262	ENSMZEG00005020920	rif1	70	51.262	Maylandia_zebra
ENSCAFG00000005670	RIF1	81	61.918	ENSMGAG00000012732	RIF1	92	62.431	Meleagris_gallopavo
ENSCAFG00000005670	RIF1	92	85.237	ENSMAUG00000013158	Rif1	99	85.237	Mesocricetus_auratus
ENSCAFG00000005670	RIF1	97	80.893	ENSMICG00000046127	RIF1	100	80.813	Microcebus_murinus
ENSCAFG00000005670	RIF1	97	68.048	ENSMOCG00000009381	Rif1	100	68.090	Microtus_ochrogaster
ENSCAFG00000005670	RIF1	60	49.839	ENSMMOG00000006519	rif1	64	49.839	Mola_mola
ENSCAFG00000005670	RIF1	97	59.331	ENSMODG00000003703	RIF1	100	59.300	Monodelphis_domestica
ENSCAFG00000005670	RIF1	64	48.450	ENSMALG00000016759	rif1	75	48.714	Monopterus_albus
ENSCAFG00000005670	RIF1	97	67.310	MGP_CAROLIEiJ_G0023555	Rif1	100	67.216	Mus_caroli
ENSCAFG00000005670	RIF1	97	67.814	ENSMUSG00000036202	Rif1	100	67.721	Mus_musculus
ENSCAFG00000005670	RIF1	97	66.734	MGP_PahariEiJ_G0025006	Rif1	100	66.413	Mus_pahari
ENSCAFG00000005670	RIF1	97	67.764	MGP_SPRETEiJ_G0024476	Rif1	100	67.671	Mus_spretus
ENSCAFG00000005670	RIF1	97	87.686	ENSMPUG00000000371	RIF1	100	87.606	Mustela_putorius_furo
ENSCAFG00000005670	RIF1	87	79.355	ENSMLUG00000003376	RIF1	100	79.310	Myotis_lucifugus
ENSCAFG00000005670	RIF1	97	71.935	ENSNGAG00000009268	Rif1	100	71.935	Nannospalax_galili
ENSCAFG00000005670	RIF1	63	50.520	ENSNBRG00000014257	rif1	72	50.039	Neolamprologus_brichardi
ENSCAFG00000005670	RIF1	97	76.932	ENSNLEG00000010955	RIF1	100	77.253	Nomascus_leucogenys
ENSCAFG00000005670	RIF1	78	79.018	ENSMEUG00000007601	-	85	79.018	Notamacropus_eugenii
ENSCAFG00000005670	RIF1	96	70.603	ENSODEG00000003950	RIF1	99	70.418	Octodon_degus
ENSCAFG00000005670	RIF1	73	48.930	ENSONIG00000013657	rif1	72	63.415	Oreochromis_niloticus
ENSCAFG00000005670	RIF1	78	74.694	ENSOANG00000006078	-	82	74.694	Ornithorhynchus_anatinus
ENSCAFG00000005670	RIF1	97	75.977	ENSOCUG00000017435	RIF1	100	76.260	Oryctolagus_cuniculus
ENSCAFG00000005670	RIF1	61	48.346	ENSORLG00020001302	rif1	69	48.249	Oryzias_latipes_hni
ENSCAFG00000005670	RIF1	61	48.171	ENSORLG00015000009	rif1	68	48.249	Oryzias_latipes_hsok
ENSCAFG00000005670	RIF1	60	49.280	ENSOMEG00000021513	rif1	53	49.285	Oryzias_melastigma
ENSCAFG00000005670	RIF1	97	76.895	ENSOGAG00000006141	RIF1	99	77.137	Otolemur_garnettii
ENSCAFG00000005670	RIF1	97	81.162	ENSOARG00000008930	RIF1	100	81.162	Ovis_aries
ENSCAFG00000005670	RIF1	97	78.238	ENSPPAG00000023754	RIF1	100	78.278	Pan_paniscus
ENSCAFG00000005670	RIF1	97	86.645	ENSPPRG00000003618	RIF1	100	86.605	Panthera_pardus
ENSCAFG00000005670	RIF1	97	86.645	ENSPTIG00000020652	RIF1	100	86.645	Panthera_tigris_altaica
ENSCAFG00000005670	RIF1	97	78.238	ENSPTRG00000012534	RIF1	100	78.278	Pan_troglodytes
ENSCAFG00000005670	RIF1	97	78.842	ENSPANG00000008525	RIF1	100	78.842	Papio_anubis
ENSCAFG00000005670	RIF1	60	51.261	ENSPKIG00000004267	rif1	72	51.371	Paramormyrops_kingsleyae
ENSCAFG00000005670	RIF1	63	45.244	ENSPMGG00000016141	rif1	79	44.339	Periophthalmus_magnuspinnatus
ENSCAFG00000005670	RIF1	95	69.771	ENSPEMG00000000446	Rif1	99	69.636	Peromyscus_maniculatus_bairdii
ENSCAFG00000005670	RIF1	97	59.145	ENSPCIG00000009185	RIF1	99	59.273	Phascolarctos_cinereus
ENSCAFG00000005670	RIF1	57	51.413	ENSPFOG00000000554	-	67	51.413	Poecilia_formosa
ENSCAFG00000005670	RIF1	64	50.945	ENSPFOG00000017804	rif1	70	51.024	Poecilia_formosa
ENSCAFG00000005670	RIF1	64	51.067	ENSPLAG00000017945	rif1	76	51.067	Poecilia_latipinna
ENSCAFG00000005670	RIF1	54	50.145	ENSPMEG00000006897	-	66	50.145	Poecilia_mexicana
ENSCAFG00000005670	RIF1	65	50.311	ENSPREG00000018052	rif1	70	54.002	Poecilia_reticulata
ENSCAFG00000005670	RIF1	97	78.640	ENSPPYG00000012846	RIF1	100	78.842	Pongo_abelii
ENSCAFG00000005670	RIF1	80	83.333	ENSPCAG00000009032	RIF1	83	83.333	Procavia_capensis
ENSCAFG00000005670	RIF1	97	81.094	ENSPCOG00000027888	RIF1	100	80.853	Propithecus_coquereli
ENSCAFG00000005670	RIF1	90	88.032	ENSPVAG00000014276	RIF1	95	88.032	Pteropus_vampyrus
ENSCAFG00000005670	RIF1	61	49.322	ENSPNYG00000012940	rif1	68	49.322	Pundamilia_nyererei
ENSCAFG00000005670	RIF1	60	53.871	ENSPNAG00000016685	rif1	64	53.871	Pygocentrus_nattereri
ENSCAFG00000005670	RIF1	97	67.108	ENSRNOG00000054901	Rif1	100	67.014	Rattus_norvegicus
ENSCAFG00000005670	RIF1	97	77.925	ENSRBIG00000003704	RIF1	100	78.086	Rhinopithecus_bieti
ENSCAFG00000005670	RIF1	97	78.890	ENSRROG00000028206	RIF1	100	79.051	Rhinopithecus_roxellana
ENSCAFG00000005670	RIF1	97	73.331	ENSSBOG00000029530	RIF1	100	73.368	Saimiri_boliviensis_boliviensis
ENSCAFG00000005670	RIF1	60	53.306	ENSSFOG00015021539	rif1	69	53.306	Scleropages_formosus
ENSCAFG00000005670	RIF1	67	48.811	ENSSMAG00000011704	rif1	67	48.852	Scophthalmus_maximus
ENSCAFG00000005670	RIF1	72	50.441	ENSSDUG00000015632	rif1	89	49.882	Seriola_dumerili
ENSCAFG00000005670	RIF1	59	83.729	ENSSARG00000007161	-	62	83.729	Sorex_araneus
ENSCAFG00000005670	RIF1	83	63.145	ENSSPUG00000003062	RIF1	93	63.145	Sphenodon_punctatus
ENSCAFG00000005670	RIF1	97	81.489	ENSSSCG00000016395	RIF1	100	81.408	Sus_scrofa
ENSCAFG00000005670	RIF1	70	49.013	ENSTRUG00000015808	rif1	55	48.142	Takifugu_rubripes
ENSCAFG00000005670	RIF1	63	50.303	ENSTNIG00000011538	rif1	70	50.303	Tetraodon_nigroviridis
ENSCAFG00000005670	RIF1	80	89.241	ENSTBEG00000016082	RIF1	82	89.241	Tupaia_belangeri
ENSCAFG00000005670	RIF1	97	83.434	ENSTTRG00000011190	RIF1	100	83.434	Tursiops_truncatus
ENSCAFG00000005670	RIF1	84	93.854	ENSUAMG00000026385	RIF1	98	93.854	Ursus_americanus
ENSCAFG00000005670	RIF1	93	93.385	ENSUMAG00000000337	RIF1	99	93.385	Ursus_maritimus
ENSCAFG00000005670	RIF1	97	80.508	ENSVPAG00000002162	RIF1	100	80.508	Vicugna_pacos
ENSCAFG00000005670	RIF1	97	97.208	ENSVVUG00000011293	RIF1	100	97.208	Vulpes_vulpes
ENSCAFG00000005670	RIF1	56	61.934	ENSXETG00000004530	rif1	68	60.580	Xenopus_tropicalis
ENSCAFG00000005670	RIF1	64	47.928	ENSXMAG00000000506	rif1	70	48.084	Xiphophorus_maculatus