EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000005762 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 1060 bases
Position: chr15:21431851-21432910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000043120	RRM_1	PF00076.22	4.2e-08	1	1
ENSCAFP00000043120	HnRNPA1	PF11627.8	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000009290	-	1026	-	ENSCAFP00000043120	342 (aa)	-	J9PBE1

Gene Model

Click here to download ENSCAFG00000005762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000005762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000005762	-	51	30.526	ENSCAFG00000025045	HNRNPD	51	30.526
ENSCAFG00000005762	-	58	51.415	ENSCAFG00000005307	-	91	48.684
ENSCAFG00000005762	-	55	52.551	ENSCAFG00000013497	HNRNPA3	94	47.774
ENSCAFG00000005762	-	98	42.708	ENSCAFG00000013303	-	80	84.314
ENSCAFG00000005762	-	98	50.867	ENSCAFG00000006327	-	94	51.429
ENSCAFG00000005762	-	99	50.287	ENSCAFG00000005164	-	93	48.324
ENSCAFG00000005762	-	53	30.120	ENSCAFG00000019528	DAZAP1	73	30.120
ENSCAFG00000005762	-	98	51.453	ENSCAFG00000006663	-	78	84.615
ENSCAFG00000005762	-	69	38.174	ENSCAFG00000017424	-	84	64.286
ENSCAFG00000005762	-	68	41.152	ENSCAFG00000006110	-	75	41.304
ENSCAFG00000005762	-	55	47.716	ENSCAFG00000002885	HNRNPA2B1	92	46.491
ENSCAFG00000005762	-	53	61.780	ENSCAFG00000002232	-	92	59.365
ENSCAFG00000005762	-	52	58.919	ENSCAFG00000006580	-	95	62.050
ENSCAFG00000005762	-	76	74.000	ENSCAFG00000017316	-	76	75.472
ENSCAFG00000005762	-	50	40.110	ENSCAFG00000001132	HNRNPA0	63	40.201
ENSCAFG00000005762	-	98	52.601	ENSCAFG00000032455	-	94	50.430
ENSCAFG00000005762	-	53	85.714	ENSCAFG00000030052	-	94	53.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000005762	-	59	48.372	ENSAMEG00000015127	-	93	48.848	Ailuropoda_melanoleuca
ENSCAFG00000005762	-	54	66.667	ENSDNOG00000009228	-	89	68.627	Dasypus_novemcinctus
ENSCAFG00000005762	-	98	49.138	ENSPTRG00000031176	-	93	46.479	Pan_troglodytes