EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000006327 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 988 bases
Position: chr20:17617485-17618472
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000009492	RRM_1	PF00076.22	8.4e-30	1	2
ENSCAFP00000009492	RRM_1	PF00076.22	8.4e-30	2	2
ENSCAFP00000009492	HnRNPA1	PF11627.8	8.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000010232	-	969	-	ENSCAFP00000009492	322 (aa)	-	E2R5N6

Gene Model

Click here to download ENSCAFG00000006327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000006327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000006327	-	99	69.159	ENSCAFG00000030783	-	100	69.255
ENSCAFG00000006327	-	79	56.299	ENSCAFG00000006110	-	75	57.609
ENSCAFG00000006327	-	57	40.331	ENSCAFG00000025045	HNRNPD	53	40.659
ENSCAFG00000006327	-	94	61.184	ENSCAFG00000013303	-	92	58.224
ENSCAFG00000006327	-	76	76.667	ENSCAFG00000002232	-	93	64.286
ENSCAFG00000006327	-	75	36.515	ENSCAFG00000010283	MSI1	52	40.104
ENSCAFG00000006327	-	94	78.502	ENSCAFG00000005164	-	92	76.547
ENSCAFG00000006327	-	55	34.459	ENSCAFG00000016759	TARDBP	53	32.738
ENSCAFG00000006327	-	86	78.986	ENSCAFG00000019097	-	95	82.857
ENSCAFG00000006327	-	100	75.776	ENSCAFG00000000389	-	100	72.981
ENSCAFG00000006327	-	93	90.351	ENSCAFG00000030052	-	83	85.837
ENSCAFG00000006327	-	94	80.132	ENSCAFG00000017180	-	94	77.152
ENSCAFG00000006327	-	58	89.894	ENSCAFG00000006580	-	100	72.267
ENSCAFG00000006327	-	57	55.429	ENSCAFG00000001132	HNRNPA0	58	54.749
ENSCAFG00000006327	-	61	37.198	ENSCAFG00000019528	DAZAP1	72	37.968
ENSCAFG00000006327	-	61	83.756	ENSCAFG00000003493	-	100	78.395
ENSCAFG00000006327	-	50	38.608	ENSCAFG00000000241	HNRNPAB	57	38.608
ENSCAFG00000006327	-	100	79.193	ENSCAFG00000006663	-	100	77.019
ENSCAFG00000006327	-	100	80.805	ENSCAFG00000032455	-	100	78.328
ENSCAFG00000006327	-	94	51.429	ENSCAFG00000005762	-	98	50.867
ENSCAFG00000006327	-	99	68.847	ENSCAFG00000031044	-	100	69.255
ENSCAFG00000006327	-	89	77.352	ENSCAFG00000000687	-	92	79.791
ENSCAFG00000006327	-	79	67.589	ENSCAFG00000005307	-	83	74.479
ENSCAFG00000006327	-	61	79.082	ENSCAFG00000013497	HNRNPA3	79	69.343
ENSCAFG00000006327	-	94	73.874	ENSCAFG00000025274	-	74	73.874
ENSCAFG00000006327	-	82	30.337	ENSCAFG00000000776	-	67	31.959
ENSCAFG00000006327	-	89	80.357	ENSCAFG00000017316	-	99	73.125
ENSCAFG00000006327	-	66	70.093	ENSCAFG00000002885	HNRNPA2B1	89	56.877
ENSCAFG00000006327	-	91	54.266	ENSCAFG00000017424	-	94	52.347
ENSCAFG00000006327	-	96	75.676	ENSCAFG00000006036	-	76	74.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000006327	-	61	69.036	ENSAMEG00000002186	-	99	66.434	Ailuropoda_melanoleuca
ENSCAFG00000006327	-	92	79.032	ENSANAG00000031918	-	100	79.032	Aotus_nancymaae
ENSCAFG00000006327	-	86	82.014	ENSCHIG00000020351	-	88	82.310	Capra_hircus
ENSCAFG00000006327	-	52	70.238	ENSCGRG00001017212	-	90	53.041	Cricetulus_griseus_chok1gshd
ENSCAFG00000006327	-	100	68.868	ENSDNOG00000030945	-	100	68.868	Dasypus_novemcinctus
ENSCAFG00000006327	-	94	57.426	ENSDNOG00000039534	-	93	55.298	Dasypus_novemcinctus
ENSCAFG00000006327	-	94	68.092	ENSDNOG00000048335	-	94	69.408	Dasypus_novemcinctus
ENSCAFG00000006327	-	100	89.130	ENSDORG00000027821	-	100	86.335	Dipodomys_ordii
ENSCAFG00000006327	-	88	66.667	ENSETEG00000010244	-	92	50.502	Echinops_telfairi
ENSCAFG00000006327	-	66	61.395	ENSETEG00000004129	-	72	64.467	Echinops_telfairi
ENSCAFG00000006327	-	100	88.509	ENSFDAG00000021342	-	100	85.714	Fukomys_damarensis
ENSCAFG00000006327	-	100	88.509	ENSHGLG00000003139	HNRNPA1	100	85.714	Heterocephalus_glaber_female
ENSCAFG00000006327	-	90	71.478	ENSHGLG00100017719	-	90	70.671	Heterocephalus_glaber_male
ENSCAFG00000006327	-	100	88.509	ENSHGLG00100015974	HNRNPA1	100	85.714	Heterocephalus_glaber_male
ENSCAFG00000006327	-	80	72.973	ENSSTOG00000034519	-	80	69.498	Ictidomys_tridecemlineatus
ENSCAFG00000006327	-	100	58.092	ENSMNEG00000038539	-	58	66.204	Macaca_nemestrina
ENSCAFG00000006327	-	98	66.087	ENSMPUG00000003127	-	100	62.899	Mustela_putorius_furo
ENSCAFG00000006327	-	77	68.145	ENSMPUG00000008269	-	72	74.346	Mustela_putorius_furo
ENSCAFG00000006327	-	59	55.026	ENSNLEG00000032512	-	90	52.252	Nomascus_leucogenys
ENSCAFG00000006327	-	60	89.691	ENSOCUG00000028124	-	97	70.468	Oryctolagus_cuniculus
ENSCAFG00000006327	-	87	66.786	ENSPTIG00000013949	-	87	66.421	Panthera_tigris_altaica
ENSCAFG00000006327	-	99	77.978	ENSPANG00000017095	-	100	77.617	Papio_anubis
ENSCAFG00000006327	-	61	83.333	ENSSFOG00015007588	-	87	62.462	Scleropages_formosus
ENSCAFG00000006327	-	89	84.615	ENSTBEG00000012511	-	98	84.342	Tupaia_belangeri
ENSCAFG00000006327	-	95	56.592	ENSTBEG00000007607	-	94	56.908	Tupaia_belangeri