EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000006463 (Gene tree)
Gene ID: 102157273
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 3012 bases
Position: chr27:848200-851211
Accession: 102157273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000009674	zf-U11-48K	PF05253.12	3.8e-19	1	2
ENSCAFP00000009674	zf-U11-48K	PF05253.12	3.8e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000010432	-	468	XM_005636736	ENSCAFP00000009674	155 (aa)	XP_005636793	E2QV24

Gene Model

Click here to download ENSCAFG00000006463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000006463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000006463	-	97	53.947	ENSCAFG00000009338	GTSF1L	88	53.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000006463	-	99	90.196	ENSAMEG00000000958	-	100	90.196	Ailuropoda_melanoleuca
ENSCAFG00000006463	-	99	100.000	ENSCAFG00020020371	-	97	100.000	Canis_lupus_dingo
ENSCAFG00000006463	-	100	72.258	ENSCPOG00000023851	-	100	72.258	Cavia_porcellus
ENSCAFG00000006463	-	95	72.109	ENSCLAG00000008579	-	100	72.109	Chinchilla_lanigera
ENSCAFG00000006463	-	100	70.323	ENSCGRG00001016136	Gtsf2	100	70.323	Cricetulus_griseus_chok1gshd
ENSCAFG00000006463	-	100	70.323	ENSCGRG00000012950	Gtsf2	100	70.323	Cricetulus_griseus_crigri
ENSCAFG00000006463	-	100	78.710	ENSDORG00000026087	Gtsf2	100	78.710	Dipodomys_ordii
ENSCAFG00000006463	-	68	73.832	ENSEASG00005010262	-	98	73.832	Equus_asinus_asinus
ENSCAFG00000006463	-	68	81.132	ENSECAG00000014413	-	98	81.132	Equus_caballus
ENSCAFG00000006463	-	70	88.073	ENSFCAG00000031316	-	93	88.073	Felis_catus
ENSCAFG00000006463	-	100	74.194	ENSFDAG00000019555	-	100	74.194	Fukomys_damarensis
ENSCAFG00000006463	-	92	78.322	ENSHGLG00000002798	-	100	76.129	Heterocephalus_glaber_female
ENSCAFG00000006463	-	92	78.322	ENSHGLG00100012359	-	100	76.129	Heterocephalus_glaber_male
ENSCAFG00000006463	-	97	75.497	ENSSTOG00000030158	-	100	75.497	Ictidomys_tridecemlineatus
ENSCAFG00000006463	-	100	72.903	ENSJJAG00000016320	Gtsf2	100	72.903	Jaculus_jaculus
ENSCAFG00000006463	-	99	74.510	ENSMAUG00000017189	-	94	74.510	Mesocricetus_auratus
ENSCAFG00000006463	-	51	81.013	ENSMAUG00000014687	-	87	81.013	Mesocricetus_auratus
ENSCAFG00000006463	-	100	72.258	ENSMOCG00000014770	Gtsf2	100	72.258	Microtus_ochrogaster
ENSCAFG00000006463	-	100	70.968	MGP_CAROLIEiJ_G0020380	Gtsf2	100	70.968	Mus_caroli
ENSCAFG00000006463	-	100	71.613	ENSMUSG00000053508	Gtsf2	100	71.613	Mus_musculus
ENSCAFG00000006463	-	100	73.548	MGP_PahariEiJ_G0020379	Gtsf2	100	73.548	Mus_pahari
ENSCAFG00000006463	-	100	71.613	MGP_SPRETEiJ_G0021273	Gtsf2	100	71.613	Mus_spretus
ENSCAFG00000006463	-	100	89.032	ENSMPUG00000005664	-	100	89.032	Mustela_putorius_furo
ENSCAFG00000006463	-	100	67.742	ENSNGAG00000008752	Gtsf2	100	67.742	Nannospalax_galili
ENSCAFG00000006463	-	89	71.014	ENSODEG00000013228	-	98	69.388	Octodon_degus
ENSCAFG00000006463	-	82	90.551	ENSPPRG00000004157	-	99	90.551	Panthera_pardus
ENSCAFG00000006463	-	82	90.551	ENSPTIG00000020670	-	99	90.551	Panthera_tigris_altaica
ENSCAFG00000006463	-	100	67.742	ENSPEMG00000014641	-	100	67.742	Peromyscus_maniculatus_bairdii
ENSCAFG00000006463	-	100	75.484	ENSPEMG00000010828	-	100	75.484	Peromyscus_maniculatus_bairdii
ENSCAFG00000006463	-	100	71.613	ENSRNOG00000036830	RGD1563200	100	71.613	Rattus_norvegicus
ENSCAFG00000006463	-	98	71.053	ENSSSCG00000000296	-	92	71.053	Sus_scrofa
ENSCAFG00000006463	-	67	91.346	ENSUAMG00000021668	-	95	91.346	Ursus_americanus
ENSCAFG00000006463	-	67	91.346	ENSUMAG00000011281	-	95	91.346	Ursus_maritimus
ENSCAFG00000006463	-	68	94.340	ENSVVUG00000023684	-	97	94.340	Vulpes_vulpes