EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000006700 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 477 bases
Position: chr26:1512424-1512900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000033898	Ribosomal_L23	PF00276.20	9.6e-09	1	1
ENSCAFP00000033898	Ribosomal_L23eN	PF03939.13	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000010781	-	450	-	ENSCAFP00000033898	149 (aa)	-	F1PF77

Gene Model

Click here to download ENSCAFG00000006700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000006700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000006700	-	79	60.317	ENSCAFG00000024043	-	100	60.127
ENSCAFG00000006700	-	68	47.748	ENSCAFG00000004716	-	96	45.033
ENSCAFG00000006700	-	79	59.350	ENSCAFG00000002410	-	100	60.645
ENSCAFG00000006700	-	79	62.698	ENSCAFG00000031731	-	100	62.025
ENSCAFG00000006700	-	79	61.417	ENSCAFG00000024427	-	100	59.119
ENSCAFG00000006700	-	96	43.949	ENSCAFG00000003391	-	100	43.949
ENSCAFG00000006700	-	79	55.118	ENSCAFG00000000014	-	97	53.595
ENSCAFG00000006700	-	81	58.462	ENSCAFG00000017449	-	97	58.442
ENSCAFG00000006700	-	79	59.375	ENSCAFG00000004370	-	99	58.599
ENSCAFG00000006700	-	97	55.844	ENSCAFG00000017678	-	97	55.844
ENSCAFG00000006700	-	85	54.815	ENSCAFG00000019297	-	98	54.000
ENSCAFG00000006700	-	80	60.938	ENSCAFG00000004933	-	99	60.265
ENSCAFG00000006700	-	81	52.308	ENSCAFG00000007256	-	97	53.595
ENSCAFG00000006700	-	79	55.385	ENSCAFG00000030594	-	99	57.317
ENSCAFG00000006700	-	79	50.413	ENSCAFG00000003047	-	100	53.595
ENSCAFG00000006700	-	96	45.098	ENSCAFG00000015308	-	100	45.098
ENSCAFG00000006700	-	81	60.769	ENSCAFG00000031555	-	100	59.748
ENSCAFG00000006700	-	71	52.830	ENSCAFG00000007718	-	89	54.135
ENSCAFG00000006700	-	81	62.016	ENSCAFG00000020044	-	100	61.392
ENSCAFG00000006700	-	99	43.949	ENSCAFG00000003274	-	99	43.949
ENSCAFG00000006700	-	77	59.664	ENSCAFG00000003753	-	95	60.959
ENSCAFG00000006700	-	81	63.566	ENSCAFG00000001968	-	100	62.025
ENSCAFG00000006700	-	97	46.753	ENSCAFG00000014107	-	97	47.771
ENSCAFG00000006700	-	79	62.698	ENSCAFG00000016268	-	100	62.025
ENSCAFG00000006700	-	79	62.698	ENSCAFG00000015394	-	100	62.025
ENSCAFG00000006700	-	96	51.316	ENSCAFG00000003985	-	98	51.316
ENSCAFG00000006700	-	68	50.413	ENSCAFG00000018232	-	99	52.258
ENSCAFG00000006700	-	79	62.698	ENSCAFG00000018784	-	100	62.025
ENSCAFG00000006700	-	81	55.906	ENSCAFG00000030051	-	100	54.487
ENSCAFG00000006700	-	79	63.780	ENSCAFG00000004003	-	99	64.286
ENSCAFG00000006700	-	79	62.698	ENSCAFG00000002548	-	100	62.025
ENSCAFG00000006700	-	79	52.756	ENSCAFG00000009706	-	96	52.000
ENSCAFG00000006700	-	82	51.908	ENSCAFG00000005724	-	97	53.247
ENSCAFG00000006700	-	79	59.524	ENSCAFG00000017753	-	100	59.494
ENSCAFG00000006700	-	81	53.077	ENSCAFG00000001011	-	100	54.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000006700	-	96	50.955	ENSAMEG00000005208	-	96	50.955	Ailuropoda_melanoleuca
ENSCAFG00000006700	-	78	45.669	ENSCGRG00001011003	-	97	49.677	Cricetulus_griseus_chok1gshd
ENSCAFG00000006700	-	78	45.669	ENSCGRG00000019420	-	97	49.677	Cricetulus_griseus_crigri
ENSCAFG00000006700	-	100	45.860	ENSDNOG00000041286	-	100	45.860	Dasypus_novemcinctus
ENSCAFG00000006700	-	97	44.444	ENSDNOG00000039276	-	95	47.059	Dasypus_novemcinctus
ENSCAFG00000006700	-	94	41.611	ENSEASG00005003371	-	84	42.953	Equus_asinus_asinus
ENSCAFG00000006700	-	58	55.814	MGP_CAROLIEiJ_G0018758	-	71	55.814	Mus_caroli
ENSCAFG00000006700	-	57	55.294	MGP_SPRETEiJ_G0019641	-	70	55.294	Mus_spretus
ENSCAFG00000006700	-	97	50.658	ENSOCUG00000021843	-	97	50.658	Oryctolagus_cuniculus