EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000006818 (Gene tree)
Gene ID: 607950
Gene Symbol: MTREX
Alias: SKIV2L2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 102250 bases
Position: chr2:42660653-42762902
Accession: 46201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000010181	rRNA_proc-arch	PF13234.6	5.5e-87	1	1
ENSCAFP00000010181	DEAD	PF00270.29	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000010985	-	3129	XM_844583	ENSCAFP00000010181	1042 (aa)	XP_849676	E2RCI5

Gene Model

Click here to download ENSCAFG00000006818's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000006818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000006818	MTREX	89	36.789	ENSCAFG00000000679	SKIV2L	76	36.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000006818	MTREX	100	98.848	ENSG00000039123	MTREX	100	98.848	Homo_sapiens
ENSCAFG00000006818	MTREX	100	83.524	ENSAPOG00000007814	mtrex	100	83.206	Acanthochromis_polyacanthus
ENSCAFG00000006818	MTREX	100	99.137	ENSAMEG00000013856	MTREX	100	99.137	Ailuropoda_melanoleuca
ENSCAFG00000006818	MTREX	91	87.983	ENSACIG00000015117	mtrex	96	87.983	Amphilophus_citrinellus
ENSCAFG00000006818	MTREX	100	83.333	ENSAOCG00000011884	mtrex	100	83.333	Amphiprion_ocellaris
ENSCAFG00000006818	MTREX	100	83.238	ENSAPEG00000019384	mtrex	100	83.238	Amphiprion_percula
ENSCAFG00000006818	MTREX	100	83.794	ENSATEG00000015117	mtrex	100	83.985	Anabas_testudineus
ENSCAFG00000006818	MTREX	94	93.489	ENSAPLG00000009694	MTREX	99	93.489	Anas_platyrhynchos
ENSCAFG00000006818	MTREX	100	90.787	ENSACAG00000015200	MTREX	96	90.691	Anolis_carolinensis
ENSCAFG00000006818	MTREX	100	98.752	ENSANAG00000023095	MTREX	100	98.752	Aotus_nancymaae
ENSCAFG00000006818	MTREX	100	82.667	ENSACLG00000001921	mtrex	100	82.729	Astatotilapia_calliptera
ENSCAFG00000006818	MTREX	97	82.122	ENSAMXG00000018751	mtrex	99	84.137	Astyanax_mexicanus
ENSCAFG00000006818	MTREX	100	98.656	ENSBTAG00000010518	MTREX	100	98.656	Bos_taurus
ENSCAFG00000006818	MTREX	91	53.523	WBGene00012342	mtr-4	94	53.196	Caenorhabditis_elegans
ENSCAFG00000006818	MTREX	100	97.805	ENSCJAG00000001773	MTREX	100	97.805	Callithrix_jacchus
ENSCAFG00000006818	MTREX	100	100.000	ENSCAFG00020024352	MTREX	100	100.000	Canis_lupus_dingo
ENSCAFG00000006818	MTREX	100	98.752	ENSCHIG00000024413	MTREX	100	98.752	Capra_hircus
ENSCAFG00000006818	MTREX	94	98.025	ENSTSYG00000007389	MTREX	100	98.025	Carlito_syrichta
ENSCAFG00000006818	MTREX	96	73.647	ENSCAPG00000008696	MTREX	100	73.647	Cavia_aperea
ENSCAFG00000006818	MTREX	100	98.081	ENSCPOG00000009797	MTREX	100	98.081	Cavia_porcellus
ENSCAFG00000006818	MTREX	100	98.752	ENSCCAG00000014177	MTREX	100	98.752	Cebus_capucinus
ENSCAFG00000006818	MTREX	100	98.656	ENSCATG00000042153	MTREX	100	98.656	Cercocebus_atys
ENSCAFG00000006818	MTREX	100	97.985	ENSCLAG00000006622	MTREX	100	97.985	Chinchilla_lanigera
ENSCAFG00000006818	MTREX	100	94.163	ENSCSAG00000016445	MTREX	100	94.163	Chlorocebus_sabaeus
ENSCAFG00000006818	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCAFG00000006818	MTREX	100	92.617	ENSCPBG00000026551	MTREX	94	93.097	Chrysemys_picta_bellii
ENSCAFG00000006818	MTREX	99	66.444	ENSCING00000003239	-	99	66.348	Ciona_intestinalis
ENSCAFG00000006818	MTREX	99	65.271	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSCAFG00000006818	MTREX	100	98.560	ENSCANG00000035770	MTREX	100	98.560	Colobus_angolensis_palliatus
ENSCAFG00000006818	MTREX	100	97.505	ENSCGRG00001024680	Mtrex	100	97.505	Cricetulus_griseus_chok1gshd
ENSCAFG00000006818	MTREX	100	97.505	ENSCGRG00000000307	Mtrex	100	97.505	Cricetulus_griseus_crigri
ENSCAFG00000006818	MTREX	100	82.044	ENSCSEG00000018621	mtrex	98	82.044	Cynoglossus_semilaevis
ENSCAFG00000006818	MTREX	100	82.908	ENSCVAG00000004556	mtrex	100	83.714	Cyprinodon_variegatus
ENSCAFG00000006818	MTREX	100	84.938	ENSDARG00000013457	mtrex	100	84.938	Danio_rerio
ENSCAFG00000006818	MTREX	100	96.941	ENSDNOG00000015375	MTREX	100	96.941	Dasypus_novemcinctus
ENSCAFG00000006818	MTREX	100	98.081	ENSDORG00000006782	Mtrex	100	98.081	Dipodomys_ordii
ENSCAFG00000006818	MTREX	99	62.394	FBgn0001986	Mtr4	93	65.060	Drosophila_melanogaster
ENSCAFG00000006818	MTREX	90	80.468	ENSETEG00000000727	MTREX	90	80.468	Echinops_telfairi
ENSCAFG00000006818	MTREX	99	74.591	ENSEBUG00000012869	mtrex	99	74.591	Eptatretus_burgeri
ENSCAFG00000006818	MTREX	100	98.560	ENSEASG00005013270	MTREX	100	98.560	Equus_asinus_asinus
ENSCAFG00000006818	MTREX	100	98.656	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
ENSCAFG00000006818	MTREX	98	88.780	ENSEEUG00000000527	MTREX	100	88.780	Erinaceus_europaeus
ENSCAFG00000006818	MTREX	98	85.354	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSCAFG00000006818	MTREX	100	99.040	ENSFCAG00000010575	MTREX	100	99.040	Felis_catus
ENSCAFG00000006818	MTREX	100	90.211	ENSFALG00000010850	MTREX	100	90.115	Ficedula_albicollis
ENSCAFG00000006818	MTREX	100	97.313	ENSFDAG00000011199	MTREX	100	97.313	Fukomys_damarensis
ENSCAFG00000006818	MTREX	100	83.508	ENSFHEG00000023014	mtrex	100	82.729	Fundulus_heteroclitus
ENSCAFG00000006818	MTREX	100	79.962	ENSGMOG00000014702	mtrex	100	80.248	Gadus_morhua
ENSCAFG00000006818	MTREX	100	91.171	ENSGALG00000014709	MTREX	86	91.267	Gallus_gallus
ENSCAFG00000006818	MTREX	100	83.699	ENSGAFG00000012425	mtrex	98	87.500	Gambusia_affinis
ENSCAFG00000006818	MTREX	100	79.218	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSCAFG00000006818	MTREX	100	92.522	ENSGAGG00000020036	MTREX	100	92.522	Gopherus_agassizii
ENSCAFG00000006818	MTREX	100	98.944	ENSGGOG00000001867	MTREX	100	98.944	Gorilla_gorilla
ENSCAFG00000006818	MTREX	100	82.667	ENSHBUG00000006229	mtrex	100	82.729	Haplochromis_burtoni
ENSCAFG00000006818	MTREX	100	97.601	ENSHGLG00000019445	SKIV2L2	100	97.601	Heterocephalus_glaber_female
ENSCAFG00000006818	MTREX	100	97.601	ENSHGLG00100011833	SKIV2L2	100	97.601	Heterocephalus_glaber_male
ENSCAFG00000006818	MTREX	91	84.623	ENSHCOG00000019995	mtrex	100	84.623	Hippocampus_comes
ENSCAFG00000006818	MTREX	100	85.387	ENSIPUG00000024348	skiv2l2	100	85.373	Ictalurus_punctatus
ENSCAFG00000006818	MTREX	100	98.369	ENSSTOG00000010802	MTREX	100	98.369	Ictidomys_tridecemlineatus
ENSCAFG00000006818	MTREX	100	90.211	ENSJJAG00000020975	Mtrex	100	90.019	Jaculus_jaculus
ENSCAFG00000006818	MTREX	100	82.745	ENSKMAG00000012642	mtrex	100	82.745	Kryptolebias_marmoratus
ENSCAFG00000006818	MTREX	100	83.524	ENSLBEG00000019367	mtrex	99	86.340	Labrus_bergylta
ENSCAFG00000006818	MTREX	100	88.410	ENSLACG00000009075	MTREX	100	88.157	Latimeria_chalumnae
ENSCAFG00000006818	MTREX	100	87.261	ENSLOCG00000010186	mtrex	100	86.877	Lepisosteus_oculatus
ENSCAFG00000006818	MTREX	99	95.969	ENSLAFG00000010497	MTREX	100	95.969	Loxodonta_africana
ENSCAFG00000006818	MTREX	100	98.656	ENSMFAG00000031610	MTREX	100	98.656	Macaca_fascicularis
ENSCAFG00000006818	MTREX	100	97.222	ENSMMUG00000010379	MTREX	100	97.222	Macaca_mulatta
ENSCAFG00000006818	MTREX	100	98.656	ENSMNEG00000032746	MTREX	100	98.656	Macaca_nemestrina
ENSCAFG00000006818	MTREX	100	98.656	ENSMLEG00000041051	MTREX	100	98.656	Mandrillus_leucophaeus
ENSCAFG00000006818	MTREX	100	82.634	ENSMAMG00000016753	mtrex	96	88.518	Mastacembelus_armatus
ENSCAFG00000006818	MTREX	100	82.667	ENSMZEG00005000414	mtrex	100	82.729	Maylandia_zebra
ENSCAFG00000006818	MTREX	94	67.745	ENSMGAG00000003980	MTREX	100	67.745	Meleagris_gallopavo
ENSCAFG00000006818	MTREX	100	97.409	ENSMAUG00000010727	Mtrex	100	97.409	Mesocricetus_auratus
ENSCAFG00000006818	MTREX	100	99.040	ENSMICG00000012779	MTREX	100	99.040	Microcebus_murinus
ENSCAFG00000006818	MTREX	100	97.409	ENSMOCG00000019886	Mtrex	100	97.409	Microtus_ochrogaster
ENSCAFG00000006818	MTREX	100	81.584	ENSMMOG00000002476	mtrex	100	81.584	Mola_mola
ENSCAFG00000006818	MTREX	100	93.282	ENSMODG00000019494	MTREX	100	93.282	Monodelphis_domestica
ENSCAFG00000006818	MTREX	92	82.600	ENSMALG00000002917	mtrex	99	82.600	Monopterus_albus
ENSCAFG00000006818	MTREX	100	96.929	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	Mus_caroli
ENSCAFG00000006818	MTREX	100	97.121	ENSMUSG00000016018	Mtrex	100	97.121	Mus_musculus
ENSCAFG00000006818	MTREX	100	97.025	MGP_PahariEiJ_G0015967	Mtrex	100	97.025	Mus_pahari
ENSCAFG00000006818	MTREX	100	97.121	MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	Mus_spretus
ENSCAFG00000006818	MTREX	100	99.424	ENSMPUG00000007619	MTREX	100	99.424	Mustela_putorius_furo
ENSCAFG00000006818	MTREX	100	97.033	ENSMLUG00000001152	MTREX	100	97.033	Myotis_lucifugus
ENSCAFG00000006818	MTREX	100	97.793	ENSNGAG00000011938	Mtrex	100	97.793	Nannospalax_galili
ENSCAFG00000006818	MTREX	100	82.762	ENSNBRG00000011293	mtrex	100	82.824	Neolamprologus_brichardi
ENSCAFG00000006818	MTREX	100	94.732	ENSNLEG00000001494	MTREX	100	94.732	Nomascus_leucogenys
ENSCAFG00000006818	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCAFG00000006818	MTREX	100	81.958	ENSOPRG00000008009	MTREX	100	82.438	Ochotona_princeps
ENSCAFG00000006818	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSCAFG00000006818	MTREX	100	82.571	ENSONIG00000007587	mtrex	100	82.634	Oreochromis_niloticus
ENSCAFG00000006818	MTREX	100	98.656	ENSOCUG00000004463	MTREX	100	98.656	Oryctolagus_cuniculus
ENSCAFG00000006818	MTREX	100	82.555	ENSORLG00000005443	mtrex	100	82.555	Oryzias_latipes
ENSCAFG00000006818	MTREX	100	82.459	ENSORLG00020006329	mtrex	100	82.459	Oryzias_latipes_hni
ENSCAFG00000006818	MTREX	100	82.459	ENSORLG00015012924	mtrex	100	82.459	Oryzias_latipes_hsok
ENSCAFG00000006818	MTREX	100	82.034	ENSOMEG00000008825	mtrex	100	81.844	Oryzias_melastigma
ENSCAFG00000006818	MTREX	100	98.464	ENSOGAG00000002886	MTREX	100	98.464	Otolemur_garnettii
ENSCAFG00000006818	MTREX	100	98.469	ENSOARG00000007764	MTREX	100	98.469	Ovis_aries
ENSCAFG00000006818	MTREX	100	98.848	ENSPPAG00000039291	MTREX	100	98.848	Pan_paniscus
ENSCAFG00000006818	MTREX	100	99.040	ENSPPRG00000019701	MTREX	100	99.040	Panthera_pardus
ENSCAFG00000006818	MTREX	100	97.505	ENSPTIG00000009313	MTREX	100	97.505	Panthera_tigris_altaica
ENSCAFG00000006818	MTREX	100	98.848	ENSPTRG00000016878	MTREX	100	98.848	Pan_troglodytes
ENSCAFG00000006818	MTREX	100	98.560	ENSPANG00000009697	MTREX	100	98.560	Papio_anubis
ENSCAFG00000006818	MTREX	100	86.819	ENSPKIG00000020833	mtrex	99	87.894	Paramormyrops_kingsleyae
ENSCAFG00000006818	MTREX	100	92.426	ENSPSIG00000012150	MTREX	100	92.426	Pelodiscus_sinensis
ENSCAFG00000006818	MTREX	100	81.316	ENSPMGG00000002582	mtrex	100	81.316	Periophthalmus_magnuspinnatus
ENSCAFG00000006818	MTREX	95	65.763	ENSPMAG00000009668	mtrex	100	65.462	Petromyzon_marinus
ENSCAFG00000006818	MTREX	91	96.832	ENSPCIG00000024730	MTREX	100	96.832	Phascolarctos_cinereus
ENSCAFG00000006818	MTREX	75	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSCAFG00000006818	MTREX	100	83.508	ENSPLAG00000021311	mtrex	100	83.603	Poecilia_latipinna
ENSCAFG00000006818	MTREX	91	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSCAFG00000006818	MTREX	100	83.222	ENSPREG00000003089	mtrex	100	83.317	Poecilia_reticulata
ENSCAFG00000006818	MTREX	98	98.927	ENSPPYG00000015469	MTREX	98	98.927	Pongo_abelii
ENSCAFG00000006818	MTREX	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSCAFG00000006818	MTREX	99	92.955	ENSPCOG00000018092	MTREX	100	92.850	Propithecus_coquereli
ENSCAFG00000006818	MTREX	100	99.136	ENSPVAG00000002445	MTREX	100	99.136	Pteropus_vampyrus
ENSCAFG00000006818	MTREX	100	82.571	ENSPNYG00000006164	mtrex	100	82.634	Pundamilia_nyererei
ENSCAFG00000006818	MTREX	100	86.151	ENSPNAG00000008794	mtrex	100	86.151	Pygocentrus_nattereri
ENSCAFG00000006818	MTREX	99	96.987	ENSRNOG00000010125	Mtrex	97	96.987	Rattus_norvegicus
ENSCAFG00000006818	MTREX	100	96.929	ENSRBIG00000034930	MTREX	100	96.929	Rhinopithecus_bieti
ENSCAFG00000006818	MTREX	100	98.656	ENSRROG00000039895	MTREX	100	98.656	Rhinopithecus_roxellana
ENSCAFG00000006818	MTREX	89	55.556	YJL050W	MTR4	89	55.556	Saccharomyces_cerevisiae
ENSCAFG00000006818	MTREX	100	98.560	ENSSBOG00000026693	MTREX	100	98.560	Saimiri_boliviensis_boliviensis
ENSCAFG00000006818	MTREX	96	95.587	ENSSHAG00000004600	MTREX	100	95.587	Sarcophilus_harrisii
ENSCAFG00000006818	MTREX	100	87.476	ENSSFOG00015014355	skiv2l2	100	87.380	Scleropages_formosus
ENSCAFG00000006818	MTREX	100	82.952	ENSSMAG00000007572	mtrex	100	82.952	Scophthalmus_maximus
ENSCAFG00000006818	MTREX	100	83.779	ENSSDUG00000023789	mtrex	100	83.779	Seriola_dumerili
ENSCAFG00000006818	MTREX	100	83.333	ENSSLDG00000006301	mtrex	100	83.588	Seriola_lalandi_dorsalis
ENSCAFG00000006818	MTREX	100	94.530	ENSSARG00000008387	MTREX	100	94.530	Sorex_araneus
ENSCAFG00000006818	MTREX	100	79.770	ENSSPUG00000007071	MTREX	100	80.077	Sphenodon_punctatus
ENSCAFG00000006818	MTREX	91	87.513	ENSSPAG00000011319	mtrex	94	87.933	Stegastes_partitus
ENSCAFG00000006818	MTREX	100	99.136	ENSSSCG00000016911	MTREX	100	99.136	Sus_scrofa
ENSCAFG00000006818	MTREX	100	90.125	ENSTGUG00000002480	MTREX	100	90.125	Taeniopygia_guttata
ENSCAFG00000006818	MTREX	100	83.048	ENSTRUG00000014571	mtrex	100	82.857	Takifugu_rubripes
ENSCAFG00000006818	MTREX	100	82.246	ENSTBEG00000007769	MTREX	100	82.246	Tupaia_belangeri
ENSCAFG00000006818	MTREX	100	98.560	ENSTTRG00000008678	MTREX	100	98.560	Tursiops_truncatus
ENSCAFG00000006818	MTREX	100	99.040	ENSUAMG00000023061	MTREX	100	99.040	Ursus_americanus
ENSCAFG00000006818	MTREX	100	98.467	ENSUMAG00000009373	MTREX	99	99.770	Ursus_maritimus
ENSCAFG00000006818	MTREX	100	87.908	ENSVPAG00000011174	MTREX	100	87.908	Vicugna_pacos
ENSCAFG00000006818	MTREX	100	99.808	ENSVVUG00000021337	MTREX	100	99.808	Vulpes_vulpes
ENSCAFG00000006818	MTREX	100	88.591	ENSXETG00000032798	MTREX	100	88.591	Xenopus_tropicalis
ENSCAFG00000006818	MTREX	100	83.317	ENSXMAG00000004799	mtrex	100	83.286	Xiphophorus_maculatus