EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000007114 (Gene tree)
Gene ID: 477760
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 56401 bases
Position: chr28:4177652-4234052
Accession: 38487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000010578	AARP2CN	PF08142.12	4.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000011417	-	5178	XM_005637510	ENSCAFP00000010578	1287 (aa)	XP_005637567	F1PKN2

Gene Model

Click here to download ENSCAFG00000007114's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000007114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000007114	BMS1	99	89.244	ENSG00000165733	BMS1	99	89.945	Homo_sapiens
ENSCAFG00000007114	BMS1	70	72.727	ENSAPOG00000002296	bms1	96	66.210	Acanthochromis_polyacanthus
ENSCAFG00000007114	BMS1	99	94.186	ENSAMEG00000016834	BMS1	99	94.729	Ailuropoda_melanoleuca
ENSCAFG00000007114	BMS1	77	80.381	ENSACIG00000002588	bms1	94	68.058	Amphilophus_citrinellus
ENSCAFG00000007114	BMS1	84	70.913	ENSAOCG00000018088	bms1	54	65.257	Amphiprion_ocellaris
ENSCAFG00000007114	BMS1	81	72.336	ENSAPEG00000014673	bms1	54	65.211	Amphiprion_percula
ENSCAFG00000007114	BMS1	88	68.320	ENSATEG00000023465	bms1	54	66.012	Anabas_testudineus
ENSCAFG00000007114	BMS1	95	72.779	ENSAPLG00000003759	BMS1	100	72.918	Anas_platyrhynchos
ENSCAFG00000007114	BMS1	100	70.382	ENSACAG00000004537	-	100	70.970	Anolis_carolinensis
ENSCAFG00000007114	BMS1	99	88.075	ENSANAG00000023432	BMS1	99	88.854	Aotus_nancymaae
ENSCAFG00000007114	BMS1	88	67.780	ENSACLG00000001294	bms1	99	61.868	Astatotilapia_calliptera
ENSCAFG00000007114	BMS1	99	90.654	ENSBTAG00000012878	BMS1	99	91.128	Bos_taurus
ENSCAFG00000007114	BMS1	82	52.415	WBGene00022021	Y61A9LA.10	99	50.658	Caenorhabditis_elegans
ENSCAFG00000007114	BMS1	99	88.776	ENSCJAG00000021705	BMS1	99	89.097	Callithrix_jacchus
ENSCAFG00000007114	BMS1	100	100.000	ENSCAFG00020025282	BMS1	100	100.000	Canis_lupus_dingo
ENSCAFG00000007114	BMS1	99	90.654	ENSCHIG00000023251	BMS1	99	91.206	Capra_hircus
ENSCAFG00000007114	BMS1	99	82.137	ENSCAPG00000008652	BMS1	99	81.747	Cavia_aperea
ENSCAFG00000007114	BMS1	99	86.349	ENSCPOG00000000502	BMS1	99	85.959	Cavia_porcellus
ENSCAFG00000007114	BMS1	99	73.774	ENSCCAG00000024969	-	99	74.630	Cebus_capucinus
ENSCAFG00000007114	BMS1	90	67.359	ENSCATG00000008695	-	97	67.563	Cercocebus_atys
ENSCAFG00000007114	BMS1	99	89.712	ENSCATG00000030625	-	99	90.179	Cercocebus_atys
ENSCAFG00000007114	BMS1	99	86.037	ENSCLAG00000002446	BMS1	99	85.803	Chinchilla_lanigera
ENSCAFG00000007114	BMS1	99	90.023	ENSCSAG00000011118	BMS1	99	90.491	Chlorocebus_sabaeus
ENSCAFG00000007114	BMS1	99	87.558	ENSCHOG00000011055	BMS1	99	87.792	Choloepus_hoffmanni
ENSCAFG00000007114	BMS1	99	74.251	ENSCPBG00000025581	BMS1	99	73.596	Chrysemys_picta_bellii
ENSCAFG00000007114	BMS1	78	59.179	ENSCING00000003181	-	99	55.799	Ciona_intestinalis
ENSCAFG00000007114	BMS1	69	56.250	ENSCSAVG00000004113	-	91	55.478	Ciona_savignyi
ENSCAFG00000007114	BMS1	99	90.647	ENSCANG00000011609	BMS1	99	90.647	Colobus_angolensis_palliatus
ENSCAFG00000007114	BMS1	99	85.315	ENSCGRG00001019461	Bms1	99	85.082	Cricetulus_griseus_chok1gshd
ENSCAFG00000007114	BMS1	99	85.315	ENSCGRG00000009016	Bms1	99	85.082	Cricetulus_griseus_crigri
ENSCAFG00000007114	BMS1	88	67.799	ENSCSEG00000002469	bms1	50	68.831	Cynoglossus_semilaevis
ENSCAFG00000007114	BMS1	85	68.498	ENSCVAG00000008371	bms1	96	68.462	Cyprinodon_variegatus
ENSCAFG00000007114	BMS1	82	72.248	ENSDARG00000054154	bms1	94	67.391	Danio_rerio
ENSCAFG00000007114	BMS1	99	88.915	ENSDNOG00000015761	BMS1	99	89.380	Dasypus_novemcinctus
ENSCAFG00000007114	BMS1	100	86.879	ENSDORG00000002982	Bms1	99	87.451	Dipodomys_ordii
ENSCAFG00000007114	BMS1	78	57.985	FBgn0036686	CG7728	94	53.797	Drosophila_melanogaster
ENSCAFG00000007114	BMS1	85	83.929	ENSETEG00000009554	BMS1	91	83.929	Echinops_telfairi
ENSCAFG00000007114	BMS1	100	92.075	ENSEASG00005006894	BMS1	100	92.075	Equus_asinus_asinus
ENSCAFG00000007114	BMS1	100	91.997	ENSECAG00000001358	BMS1	100	91.997	Equus_caballus
ENSCAFG00000007114	BMS1	83	73.589	ENSELUG00000001756	bms1	94	67.888	Esox_lucius
ENSCAFG00000007114	BMS1	100	94.017	ENSFCAG00000011220	BMS1	100	94.017	Felis_catus
ENSCAFG00000007114	BMS1	99	70.802	ENSFALG00000006882	BMS1	99	72.353	Ficedula_albicollis
ENSCAFG00000007114	BMS1	99	84.477	ENSFDAG00000001422	BMS1	99	84.711	Fukomys_damarensis
ENSCAFG00000007114	BMS1	85	69.937	ENSFHEG00000003367	bms1	98	69.186	Fundulus_heteroclitus
ENSCAFG00000007114	BMS1	89	65.484	ENSGMOG00000000718	bms1	96	65.484	Gadus_morhua
ENSCAFG00000007114	BMS1	62	68.842	ENSGALG00000002624	BMS1	99	73.568	Gallus_gallus
ENSCAFG00000007114	BMS1	99	58.465	ENSGACG00000015334	bms1	89	65.966	Gasterosteus_aculeatus
ENSCAFG00000007114	BMS1	100	73.241	ENSGAGG00000003467	BMS1	100	73.591	Gopherus_agassizii
ENSCAFG00000007114	BMS1	87	67.710	ENSHBUG00000022628	bms1	99	61.963	Haplochromis_burtoni
ENSCAFG00000007114	BMS1	99	84.957	ENSHGLG00000000477	BMS1	99	84.256	Heterocephalus_glaber_female
ENSCAFG00000007114	BMS1	99	84.867	ENSHGLG00100002176	BMS1	99	84.165	Heterocephalus_glaber_male
ENSCAFG00000007114	BMS1	89	67.097	ENSHCOG00000017604	bms1	99	67.636	Hippocampus_comes
ENSCAFG00000007114	BMS1	69	72.851	ENSIPUG00000017855	bms1	93	64.325	Ictalurus_punctatus
ENSCAFG00000007114	BMS1	99	87.919	ENSSTOG00000015063	BMS1	99	88.629	Ictidomys_tridecemlineatus
ENSCAFG00000007114	BMS1	99	85.659	ENSJJAG00000017328	Bms1	99	86.126	Jaculus_jaculus
ENSCAFG00000007114	BMS1	56	65.348	ENSKMAG00000021982	bms1	93	67.118	Kryptolebias_marmoratus
ENSCAFG00000007114	BMS1	82	71.560	ENSLBEG00000028208	bms1	97	66.260	Labrus_bergylta
ENSCAFG00000007114	BMS1	99	61.864	ENSLACG00000001600	BMS1	100	60.784	Latimeria_chalumnae
ENSCAFG00000007114	BMS1	83	74.607	ENSLOCG00000012914	bms1	94	69.171	Lepisosteus_oculatus
ENSCAFG00000007114	BMS1	99	88.396	ENSLAFG00000006250	BMS1	99	87.539	Loxodonta_africana
ENSCAFG00000007114	BMS1	84	89.416	ENSMFAG00000037771	BMS1	97	91.650	Macaca_fascicularis
ENSCAFG00000007114	BMS1	90	76.309	ENSMMUG00000007426	-	99	76.309	Macaca_mulatta
ENSCAFG00000007114	BMS1	85	71.127	ENSMLEG00000029084	-	97	71.311	Mandrillus_leucophaeus
ENSCAFG00000007114	BMS1	99	59.474	ENSMAMG00000020855	bms1	97	65.595	Mastacembelus_armatus
ENSCAFG00000007114	BMS1	87	67.710	ENSMZEG00005005663	bms1	99	61.792	Maylandia_zebra
ENSCAFG00000007114	BMS1	95	71.429	ENSMGAG00000001170	BMS1	99	72.408	Meleagris_gallopavo
ENSCAFG00000007114	BMS1	99	85.159	ENSMAUG00000002195	Bms1	99	85.004	Mesocricetus_auratus
ENSCAFG00000007114	BMS1	99	88.725	ENSMICG00000009977	BMS1	99	88.725	Microcebus_murinus
ENSCAFG00000007114	BMS1	99	85.035	ENSMOCG00000002038	Bms1	99	85.113	Microtus_ochrogaster
ENSCAFG00000007114	BMS1	85	68.191	ENSMMOG00000000977	bms1	98	66.857	Mola_mola
ENSCAFG00000007114	BMS1	99	78.802	ENSMODG00000001177	BMS1	99	79.847	Monodelphis_domestica
ENSCAFG00000007114	BMS1	99	61.017	ENSMALG00000009680	bms1	99	60.508	Monopterus_albus
ENSCAFG00000007114	BMS1	73	95.388	MGP_CAROLIEiJ_G0028785	-	85	95.388	Mus_caroli
ENSCAFG00000007114	BMS1	99	84.771	ENSMUSG00000030138	Bms1	99	84.615	Mus_musculus
ENSCAFG00000007114	BMS1	99	85.058	MGP_PahariEiJ_G0022539	Bms1	99	84.125	Mus_pahari
ENSCAFG00000007114	BMS1	99	84.538	MGP_SPRETEiJ_G0029816	Bms1	99	84.460	Mus_spretus
ENSCAFG00000007114	BMS1	100	94.716	ENSMPUG00000017276	BMS1	100	94.716	Mustela_putorius_furo
ENSCAFG00000007114	BMS1	99	90.280	ENSMLUG00000003260	BMS1	99	90.280	Myotis_lucifugus
ENSCAFG00000007114	BMS1	95	81.373	ENSNGAG00000015258	Bms1	99	75.349	Nannospalax_galili
ENSCAFG00000007114	BMS1	99	87.529	ENSNLEG00000015791	BMS1	99	88.542	Nomascus_leucogenys
ENSCAFG00000007114	BMS1	80	95.952	ENSOPRG00000005195	BMS1	81	95.952	Ochotona_princeps
ENSCAFG00000007114	BMS1	99	84.789	ENSODEG00000005554	BMS1	99	84.555	Octodon_degus
ENSCAFG00000007114	BMS1	89	68.109	ENSONIG00000007227	bms1	54	67.132	Oreochromis_niloticus
ENSCAFG00000007114	BMS1	100	76.352	ENSOANG00000000662	-	100	76.893	Ornithorhynchus_anatinus
ENSCAFG00000007114	BMS1	99	87.207	ENSOCUG00000005354	BMS1	99	87.451	Oryctolagus_cuniculus
ENSCAFG00000007114	BMS1	87	68.548	ENSORLG00000014655	bms1	98	68.147	Oryzias_latipes
ENSCAFG00000007114	BMS1	87	67.909	ENSORLG00020016246	bms1	92	68.994	Oryzias_latipes_hni
ENSCAFG00000007114	BMS1	87	68.285	ENSORLG00015014183	bms1	93	69.355	Oryzias_latipes_hsok
ENSCAFG00000007114	BMS1	87	69.625	ENSOMEG00000015042	bms1	98	69.531	Oryzias_melastigma
ENSCAFG00000007114	BMS1	99	89.363	ENSOGAG00000006511	BMS1	99	89.363	Otolemur_garnettii
ENSCAFG00000007114	BMS1	99	90.528	ENSOARG00000003900	BMS1	99	91.078	Ovis_aries
ENSCAFG00000007114	BMS1	99	85.514	ENSPPAG00000027837	BMS1	99	86.215	Pan_paniscus
ENSCAFG00000007114	BMS1	100	93.862	ENSPPRG00000001311	BMS1	100	93.862	Panthera_pardus
ENSCAFG00000007114	BMS1	100	92.152	ENSPTIG00000009652	BMS1	100	92.075	Panthera_tigris_altaica
ENSCAFG00000007114	BMS1	99	89.400	ENSPTRG00000002441	BMS1	99	90.101	Pan_troglodytes
ENSCAFG00000007114	BMS1	100	72.387	ENSPSIG00000006481	BMS1	99	72.686	Pelodiscus_sinensis
ENSCAFG00000007114	BMS1	99	78.444	ENSPEMG00000022467	Bms1	99	78.054	Peromyscus_maniculatus_bairdii
ENSCAFG00000007114	BMS1	95	93.289	ENSPCIG00000001339	BMS1	99	93.289	Phascolarctos_cinereus
ENSCAFG00000007114	BMS1	79	74.384	ENSPFOG00000015180	bms1	95	67.360	Poecilia_formosa
ENSCAFG00000007114	BMS1	79	74.631	ENSPMEG00000023176	bms1	92	67.568	Poecilia_mexicana
ENSCAFG00000007114	BMS1	79	75.248	ENSPREG00000002695	bms1	95	67.505	Poecilia_reticulata
ENSCAFG00000007114	BMS1	61	86.684	ENSPPYG00000002836	-	99	87.068	Pongo_abelii
ENSCAFG00000007114	BMS1	73	94.558	ENSPCAG00000014528	BMS1	73	94.558	Procavia_capensis
ENSCAFG00000007114	BMS1	95	84.100	ENSPCOG00000023834	-	100	84.100	Propithecus_coquereli
ENSCAFG00000007114	BMS1	99	89.097	ENSPVAG00000000725	BMS1	99	89.019	Pteropus_vampyrus
ENSCAFG00000007114	BMS1	82	81.844	ENSRNOG00000006576	Bms1	100	81.654	Rattus_norvegicus
ENSCAFG00000007114	BMS1	99	87.919	ENSRROG00000040101	BMS1	99	88.932	Rhinopithecus_roxellana
ENSCAFG00000007114	BMS1	74	46.183	YPL217C	-	84	46.809	Saccharomyces_cerevisiae
ENSCAFG00000007114	BMS1	99	89.330	ENSSBOG00000035778	BMS1	99	89.953	Saimiri_boliviensis_boliviensis
ENSCAFG00000007114	BMS1	99	78.127	ENSSHAG00000005062	BMS1	99	77.607	Sarcophilus_harrisii
ENSCAFG00000007114	BMS1	88	68.710	ENSSLDG00000015199	bms1	53	66.362	Seriola_lalandi_dorsalis
ENSCAFG00000007114	BMS1	70	78.818	ENSSARG00000014407	BMS1	100	78.930	Sorex_araneus
ENSCAFG00000007114	BMS1	99	72.602	ENSSPUG00000014454	BMS1	99	72.971	Sphenodon_punctatus
ENSCAFG00000007114	BMS1	99	91.913	ENSSSCG00000010198	BMS1	99	92.146	Sus_scrofa
ENSCAFG00000007114	BMS1	99	71.157	ENSTGUG00000006302	-	99	72.409	Taeniopygia_guttata
ENSCAFG00000007114	BMS1	86	64.309	ENSTRUG00000008028	bms1	98	63.636	Takifugu_rubripes
ENSCAFG00000007114	BMS1	99	59.308	ENSTNIG00000006216	bms1	88	65.964	Tetraodon_nigroviridis
ENSCAFG00000007114	BMS1	60	94.198	ENSTBEG00000001673	-	64	93.701	Tupaia_belangeri
ENSCAFG00000007114	BMS1	99	88.551	ENSTTRG00000007983	BMS1	99	88.162	Tursiops_truncatus
ENSCAFG00000007114	BMS1	100	95.183	ENSUAMG00000023996	BMS1	100	95.183	Ursus_americanus
ENSCAFG00000007114	BMS1	100	95.105	ENSUMAG00000016523	BMS1	100	95.105	Ursus_maritimus
ENSCAFG00000007114	BMS1	88	84.785	ENSVPAG00000007477	BMS1	99	85.576	Vicugna_pacos
ENSCAFG00000007114	BMS1	100	99.611	ENSVVUG00000021305	BMS1	100	99.611	Vulpes_vulpes
ENSCAFG00000007114	BMS1	98	64.258	ENSXETG00000008158	bms1	99	65.402	Xenopus_tropicalis
ENSCAFG00000007114	BMS1	85	67.432	ENSXCOG00000000506	bms1	96	75.550	Xiphophorus_couchianus
ENSCAFG00000007114	BMS1	85	67.360	ENSXMAG00000014236	bms1	96	67.375	Xiphophorus_maculatus