EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000007503 (Gene tree)
Gene ID: 477451
Gene Symbol: SBNO1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 209358 bases
Position: chr26:6216435-6425792
Accession: 45884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037183	ResIII	PF04851.15	5.5e-08	1	1
ENSCAFP00000038747	ResIII	PF04851.15	6.9e-08	1	1
ENSCAFP00000011150	ResIII	PF04851.15	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048386	-	4134	-	ENSCAFP00000038747	1377 (aa)	-	J9NZM7
ENSCAFT00000012025	-	4188	XM_005636121	ENSCAFP00000011150	1395 (aa)	XP_005636178	E2QXR5
ENSCAFT00000044441	-	3171	-	ENSCAFP00000037183	1057 (aa)	-	J9NVJ1

Gene Model

Click here to download ENSCAFG00000007503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000007503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000007503	SBNO1	99	57.975	ENSCAFG00000019543	SBNO2	69	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000007503	SBNO1	100	97.993	ENSG00000139697	SBNO1	100	97.993	Homo_sapiens
ENSCAFG00000007503	SBNO1	96	85.317	ENSAPOG00000003196	sbno1	98	80.858	Acanthochromis_polyacanthus
ENSCAFG00000007503	SBNO1	100	98.856	ENSAMEG00000015151	SBNO1	100	98.856	Ailuropoda_melanoleuca
ENSCAFG00000007503	SBNO1	97	83.463	ENSACIG00000008088	sbno1	99	74.228	Amphilophus_citrinellus
ENSCAFG00000007503	SBNO1	97	84.524	ENSAOCG00000014859	sbno1	99	75.316	Amphiprion_ocellaris
ENSCAFG00000007503	SBNO1	97	84.524	ENSAPEG00000006069	sbno1	99	75.316	Amphiprion_percula
ENSCAFG00000007503	SBNO1	97	85.913	ENSATEG00000006667	sbno1	99	76.154	Anabas_testudineus
ENSCAFG00000007503	SBNO1	97	95.635	ENSAPLG00000015674	SBNO1	100	91.905	Anas_platyrhynchos
ENSCAFG00000007503	SBNO1	98	92.843	ENSACAG00000015441	SBNO1	88	87.305	Anolis_carolinensis
ENSCAFG00000007503	SBNO1	100	97.921	ENSANAG00000029958	-	100	97.921	Aotus_nancymaae
ENSCAFG00000007503	SBNO1	99	78.928	ENSACLG00000024913	sbno1	99	74.288	Astatotilapia_calliptera
ENSCAFG00000007503	SBNO1	97	88.294	ENSAMXG00000019473	sbno1	99	79.986	Astyanax_mexicanus
ENSCAFG00000007503	SBNO1	99	98.679	ENSBTAG00000020505	SBNO1	99	98.494	Bos_taurus
ENSCAFG00000007503	SBNO1	100	97.921	ENSCJAG00000016599	SBNO1	100	97.921	Callithrix_jacchus
ENSCAFG00000007503	SBNO1	100	98.996	ENSCAFG00020015363	SBNO1	100	98.996	Canis_lupus_dingo
ENSCAFG00000007503	SBNO1	99	98.459	ENSCHIG00000008382	SBNO1	99	98.736	Capra_hircus
ENSCAFG00000007503	SBNO1	100	98.495	ENSTSYG00000012749	SBNO1	100	98.495	Carlito_syrichta
ENSCAFG00000007503	SBNO1	100	95.553	ENSCAPG00000000384	SBNO1	100	98.050	Cavia_aperea
ENSCAFG00000007503	SBNO1	100	97.276	ENSCPOG00000008109	SBNO1	99	98.919	Cavia_porcellus
ENSCAFG00000007503	SBNO1	100	93.625	ENSCCAG00000035316	SBNO1	100	93.625	Cebus_capucinus
ENSCAFG00000007503	SBNO1	100	96.026	ENSCATG00000008239	SBNO1	98	99.099	Cercocebus_atys
ENSCAFG00000007503	SBNO1	100	97.276	ENSCLAG00000008995	SBNO1	99	98.919	Chinchilla_lanigera
ENSCAFG00000007503	SBNO1	99	90.126	ENSCSAG00000002064	SBNO1	100	98.793	Chlorocebus_sabaeus
ENSCAFG00000007503	SBNO1	96	94.434	ENSCHOG00000008814	SBNO1	96	94.434	Choloepus_hoffmanni
ENSCAFG00000007503	SBNO1	97	95.833	ENSCPBG00000025968	SBNO1	99	91.977	Chrysemys_picta_bellii
ENSCAFG00000007503	SBNO1	100	92.627	ENSCANG00000042688	-	100	92.555	Colobus_angolensis_palliatus
ENSCAFG00000007503	SBNO1	100	97.204	ENSCGRG00001017470	Sbno1	100	97.204	Cricetulus_griseus_chok1gshd
ENSCAFG00000007503	SBNO1	100	97.204	ENSCGRG00000004756	Sbno1	100	97.204	Cricetulus_griseus_crigri
ENSCAFG00000007503	SBNO1	97	84.722	ENSCSEG00000011919	sbno1	99	75.420	Cynoglossus_semilaevis
ENSCAFG00000007503	SBNO1	97	84.722	ENSCVAG00000007038	sbno1	99	75.978	Cyprinodon_variegatus
ENSCAFG00000007503	SBNO1	97	87.302	ENSDARG00000099080	sbno1	99	79.615	Danio_rerio
ENSCAFG00000007503	SBNO1	100	97.306	ENSDNOG00000017147	SBNO1	98	98.047	Dasypus_novemcinctus
ENSCAFG00000007503	SBNO1	100	83.571	ENSDORG00000015261	Sbno1	100	83.571	Dipodomys_ordii
ENSCAFG00000007503	SBNO1	93	90.596	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSCAFG00000007503	SBNO1	68	85.859	ENSEBUG00000013823	sbno1	68	87.179	Eptatretus_burgeri
ENSCAFG00000007503	SBNO1	51	94.640	ENSEASG00005012595	-	92	94.640	Equus_asinus_asinus
ENSCAFG00000007503	SBNO1	100	98.710	ENSECAG00000006127	SBNO1	100	98.710	Equus_caballus
ENSCAFG00000007503	SBNO1	87	99.270	ENSEEUG00000003793	SBNO1	83	99.451	Erinaceus_europaeus
ENSCAFG00000007503	SBNO1	97	88.294	ENSELUG00000002886	sbno1	99	77.949	Esox_lucius
ENSCAFG00000007503	SBNO1	99	99.354	ENSFCAG00000015331	SBNO1	99	99.354	Felis_catus
ENSCAFG00000007503	SBNO1	97	95.635	ENSFALG00000009273	SBNO1	100	91.905	Ficedula_albicollis
ENSCAFG00000007503	SBNO1	99	95.768	ENSFDAG00000014232	SBNO1	99	95.768	Fukomys_damarensis
ENSCAFG00000007503	SBNO1	97	81.944	ENSFHEG00000007360	sbno1	99	75.930	Fundulus_heteroclitus
ENSCAFG00000007503	SBNO1	97	84.921	ENSGMOG00000018229	sbno1	99	78.696	Gadus_morhua
ENSCAFG00000007503	SBNO1	86	96.907	ENSGALG00000003392	SBNO1	99	92.289	Gallus_gallus
ENSCAFG00000007503	SBNO1	99	78.810	ENSGAFG00000003960	sbno1	99	75.944	Gambusia_affinis
ENSCAFG00000007503	SBNO1	97	84.921	ENSGACG00000015633	sbno1	99	78.827	Gasterosteus_aculeatus
ENSCAFG00000007503	SBNO1	100	91.332	ENSGAGG00000001065	SBNO1	99	94.775	Gopherus_agassizii
ENSCAFG00000007503	SBNO1	100	97.849	ENSGGOG00000015000	SBNO1	99	99.099	Gorilla_gorilla
ENSCAFG00000007503	SBNO1	99	71.725	ENSHBUG00000011910	sbno1	99	68.652	Haplochromis_burtoni
ENSCAFG00000007503	SBNO1	100	97.348	ENSHGLG00000014165	-	99	98.919	Heterocephalus_glaber_female
ENSCAFG00000007503	SBNO1	99	80.871	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSCAFG00000007503	SBNO1	90	90.708	ENSIPUG00000015830	Sbno1	98	78.723	Ictalurus_punctatus
ENSCAFG00000007503	SBNO1	100	98.495	ENSSTOG00000023221	SBNO1	100	98.495	Ictidomys_tridecemlineatus
ENSCAFG00000007503	SBNO1	100	97.706	ENSJJAG00000001741	Sbno1	100	97.706	Jaculus_jaculus
ENSCAFG00000007503	SBNO1	97	84.921	ENSKMAG00000009696	sbno1	99	75.806	Kryptolebias_marmoratus
ENSCAFG00000007503	SBNO1	99	78.571	ENSLBEG00000007623	sbno1	99	76.064	Labrus_bergylta
ENSCAFG00000007503	SBNO1	92	93.978	ENSLACG00000017227	SBNO1	99	83.482	Latimeria_chalumnae
ENSCAFG00000007503	SBNO1	97	89.881	ENSLOCG00000005725	sbno1	97	81.831	Lepisosteus_oculatus
ENSCAFG00000007503	SBNO1	100	97.276	ENSLAFG00000002135	SBNO1	100	97.276	Loxodonta_africana
ENSCAFG00000007503	SBNO1	100	97.993	ENSMFAG00000031429	SBNO1	100	97.993	Macaca_fascicularis
ENSCAFG00000007503	SBNO1	100	97.993	ENSMMUG00000011496	SBNO1	100	97.993	Macaca_mulatta
ENSCAFG00000007503	SBNO1	100	96.272	ENSMLEG00000033260	SBNO1	99	99.099	Mandrillus_leucophaeus
ENSCAFG00000007503	SBNO1	97	86.111	ENSMAMG00000005473	sbno1	99	75.862	Mastacembelus_armatus
ENSCAFG00000007503	SBNO1	97	96.032	ENSMGAG00000003274	SBNO1	100	91.977	Meleagris_gallopavo
ENSCAFG00000007503	SBNO1	51	93.419	ENSMAUG00000004834	-	100	93.419	Mesocricetus_auratus
ENSCAFG00000007503	SBNO1	100	97.276	ENSMICG00000006573	-	100	97.276	Microcebus_murinus
ENSCAFG00000007503	SBNO1	100	95.270	ENSMOCG00000009390	Sbno1	99	98.018	Microtus_ochrogaster
ENSCAFG00000007503	SBNO1	97	85.913	ENSMMOG00000008691	sbno1	99	71.820	Mola_mola
ENSCAFG00000007503	SBNO1	99	95.231	ENSMODG00000012470	SBNO1	98	95.050	Monodelphis_domestica
ENSCAFG00000007503	SBNO1	97	84.127	ENSMALG00000001056	sbno1	99	75.506	Monopterus_albus
ENSCAFG00000007503	SBNO1	99	97.139	MGP_CAROLIEiJ_G0027749	Sbno1	99	97.059	Mus_caroli
ENSCAFG00000007503	SBNO1	99	97.506	ENSMUSG00000038095	Sbno1	100	97.078	Mus_musculus
ENSCAFG00000007503	SBNO1	99	97.579	MGP_PahariEiJ_G0024329	Sbno1	100	97.205	Mus_pahari
ENSCAFG00000007503	SBNO1	99	97.285	MGP_SPRETEiJ_G0028747	Sbno1	100	96.696	Mus_spretus
ENSCAFG00000007503	SBNO1	100	99.211	ENSMPUG00000001658	SBNO1	100	99.211	Mustela_putorius_furo
ENSCAFG00000007503	SBNO1	100	97.921	ENSMLUG00000017159	SBNO1	100	97.921	Myotis_lucifugus
ENSCAFG00000007503	SBNO1	100	97.993	ENSNGAG00000012620	Sbno1	100	97.993	Nannospalax_galili
ENSCAFG00000007503	SBNO1	99	77.006	ENSNBRG00000019189	sbno1	99	74.306	Neolamprologus_brichardi
ENSCAFG00000007503	SBNO1	100	94.194	ENSNLEG00000001502	SBNO1	99	95.697	Nomascus_leucogenys
ENSCAFG00000007503	SBNO1	54	97.727	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSCAFG00000007503	SBNO1	100	94.560	ENSOPRG00000011054	SBNO1	100	94.488	Ochotona_princeps
ENSCAFG00000007503	SBNO1	100	97.133	ENSODEG00000009997	SBNO1	99	98.919	Octodon_degus
ENSCAFG00000007503	SBNO1	99	78.147	ENSONIG00000015348	sbno1	99	75.700	Oreochromis_niloticus
ENSCAFG00000007503	SBNO1	98	97.699	ENSOCUG00000002441	SBNO1	95	96.358	Oryctolagus_cuniculus
ENSCAFG00000007503	SBNO1	97	83.532	ENSORLG00000001593	sbno1	99	75.363	Oryzias_latipes
ENSCAFG00000007503	SBNO1	97	83.532	ENSORLG00020015216	sbno1	99	75.264	Oryzias_latipes_hni
ENSCAFG00000007503	SBNO1	97	83.730	ENSORLG00015002726	sbno1	99	75.264	Oryzias_latipes_hsok
ENSCAFG00000007503	SBNO1	97	83.730	ENSOMEG00000019313	sbno1	99	75.316	Oryzias_melastigma
ENSCAFG00000007503	SBNO1	51	90.701	ENSOGAG00000010781	-	100	90.844	Otolemur_garnettii
ENSCAFG00000007503	SBNO1	99	98.242	ENSOARG00000004404	SBNO1	99	98.066	Ovis_aries
ENSCAFG00000007503	SBNO1	100	97.993	ENSPPAG00000024635	SBNO1	100	97.993	Pan_paniscus
ENSCAFG00000007503	SBNO1	99	99.354	ENSPPRG00000022092	SBNO1	99	99.354	Panthera_pardus
ENSCAFG00000007503	SBNO1	100	99.068	ENSPTIG00000017803	SBNO1	100	99.068	Panthera_tigris_altaica
ENSCAFG00000007503	SBNO1	100	98.065	ENSPTRG00000005597	SBNO1	99	99.099	Pan_troglodytes
ENSCAFG00000007503	SBNO1	100	97.993	ENSPANG00000011640	SBNO1	99	99.099	Papio_anubis
ENSCAFG00000007503	SBNO1	96	88.095	ENSPKIG00000001441	sbno1	99	80.599	Paramormyrops_kingsleyae
ENSCAFG00000007503	SBNO1	97	95.238	ENSPSIG00000009572	-	100	91.292	Pelodiscus_sinensis
ENSCAFG00000007503	SBNO1	90	91.344	ENSPSIG00000009256	-	100	87.879	Pelodiscus_sinensis
ENSCAFG00000007503	SBNO1	55	73.277	ENSPMGG00000017196	sbno1	93	82.222	Periophthalmus_magnuspinnatus
ENSCAFG00000007503	SBNO1	100	96.918	ENSPEMG00000016087	Sbno1	100	96.918	Peromyscus_maniculatus_bairdii
ENSCAFG00000007503	SBNO1	99	94.501	ENSPCIG00000010985	SBNO1	99	94.480	Phascolarctos_cinereus
ENSCAFG00000007503	SBNO1	99	79.854	ENSPFOG00000005069	sbno1	99	76.171	Poecilia_formosa
ENSCAFG00000007503	SBNO1	99	76.992	ENSPLAG00000015015	sbno1	99	76.207	Poecilia_latipinna
ENSCAFG00000007503	SBNO1	99	77.081	ENSPMEG00000021212	sbno1	99	76.117	Poecilia_mexicana
ENSCAFG00000007503	SBNO1	97	84.752	ENSPREG00000017746	sbno1	99	75.768	Poecilia_reticulata
ENSCAFG00000007503	SBNO1	100	97.634	ENSPPYG00000005084	SBNO1	100	97.634	Pongo_abelii
ENSCAFG00000007503	SBNO1	89	92.603	ENSPCAG00000008634	SBNO1	88	92.572	Procavia_capensis
ENSCAFG00000007503	SBNO1	100	98.351	ENSPCOG00000024277	SBNO1	100	98.351	Propithecus_coquereli
ENSCAFG00000007503	SBNO1	89	98.913	ENSPVAG00000015304	SBNO1	87	99.012	Pteropus_vampyrus
ENSCAFG00000007503	SBNO1	99	78.147	ENSPNYG00000004291	sbno1	99	75.806	Pundamilia_nyererei
ENSCAFG00000007503	SBNO1	97	89.087	ENSPNAG00000015622	sbno1	99	79.022	Pygocentrus_nattereri
ENSCAFG00000007503	SBNO1	99	97.212	ENSRNOG00000001064	Sbno1	99	98.736	Rattus_norvegicus
ENSCAFG00000007503	SBNO1	100	98.136	ENSRROG00000034230	SBNO1	100	98.136	Rhinopithecus_roxellana
ENSCAFG00000007503	SBNO1	96	92.793	ENSSBOG00000015422	SBNO1	100	92.793	Saimiri_boliviensis_boliviensis
ENSCAFG00000007503	SBNO1	97	87.897	ENSSFOG00015019025	sbno1	99	80.029	Scleropages_formosus
ENSCAFG00000007503	SBNO1	99	78.005	ENSSMAG00000013640	sbno1	99	76.355	Scophthalmus_maximus
ENSCAFG00000007503	SBNO1	99	77.639	ENSSDUG00000023480	sbno1	99	75.717	Seriola_dumerili
ENSCAFG00000007503	SBNO1	99	77.639	ENSSLDG00000007928	sbno1	99	75.647	Seriola_lalandi_dorsalis
ENSCAFG00000007503	SBNO1	89	98.387	ENSSARG00000002594	SBNO1	89	98.387	Sorex_araneus
ENSCAFG00000007503	SBNO1	97	94.444	ENSSPUG00000012640	SBNO1	100	88.968	Sphenodon_punctatus
ENSCAFG00000007503	SBNO1	99	77.102	ENSSPAG00000016244	sbno1	99	75.157	Stegastes_partitus
ENSCAFG00000007503	SBNO1	100	98.495	ENSSSCG00000009776	SBNO1	100	98.495	Sus_scrofa
ENSCAFG00000007503	SBNO1	97	95.833	ENSTGUG00000005380	SBNO1	100	91.834	Taeniopygia_guttata
ENSCAFG00000007503	SBNO1	91	88.817	ENSTRUG00000018490	sbno1	99	75.507	Takifugu_rubripes
ENSCAFG00000007503	SBNO1	57	70.530	ENSTNIG00000013506	sbno1	99	70.632	Tetraodon_nigroviridis
ENSCAFG00000007503	SBNO1	100	99.211	ENSUAMG00000019671	SBNO1	100	99.211	Ursus_americanus
ENSCAFG00000007503	SBNO1	100	99.211	ENSUMAG00000004002	SBNO1	100	99.211	Ursus_maritimus
ENSCAFG00000007503	SBNO1	95	97.826	ENSVPAG00000007024	SBNO1	95	97.826	Vicugna_pacos
ENSCAFG00000007503	SBNO1	100	99.785	ENSVVUG00000027807	SBNO1	100	99.785	Vulpes_vulpes
ENSCAFG00000007503	SBNO1	97	93.849	ENSXETG00000031930	SBNO1	99	82.077	Xenopus_tropicalis
ENSCAFG00000007503	SBNO1	85	85.450	ENSXCOG00000011607	sbno1	95	75.240	Xiphophorus_couchianus
ENSCAFG00000007503	SBNO1	99	76.723	ENSXMAG00000002140	sbno1	99	76.014	Xiphophorus_maculatus