EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000007560 (Gene tree)
Gene ID: 487233
Gene Symbol: SREK1
Alias: -
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 41045 bases
Position: chr2:51761650-51802694
Accession: 46797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000039045	RRM_1	PF00076.22	3.2e-22	1	2
ENSCAFP00000039045	RRM_1	PF00076.22	3.2e-22	2	2
ENSCAFP00000011224	RRM_1	PF00076.22	2.9e-13	1	1
ENSCAFP00000041792	RRM_1	PF00076.22	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000044884	-	1878	XM_005617452	ENSCAFP00000039045	626 (aa)	XP_005617509	J9P0H2
ENSCAFT00000049340	-	1296	-	ENSCAFP00000041792	432 (aa)	-	J9P803
ENSCAFT00000012107	-	1844	XM_005617455	ENSCAFP00000011224	510 (aa)	XP_005617512	E2R749

Gene Model

Click here to download ENSCAFG00000007560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000007560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000007560	SREK1	51	60.538	ENSG00000116754	SRSF11	71	73.626	Homo_sapiens
ENSCAFG00000007560	SREK1	100	92.353	ENSG00000153914	SREK1	100	100.000	Homo_sapiens
ENSCAFG00000007560	SREK1	50	52.558	ENSAPOG00000004488	-	77	69.880	Acanthochromis_polyacanthus
ENSCAFG00000007560	SREK1	100	98.571	ENSAMEG00000011327	SREK1	100	98.571	Ailuropoda_melanoleuca
ENSCAFG00000007560	SREK1	75	44.753	ENSACIG00000018075	-	92	61.261	Amphilophus_citrinellus
ENSCAFG00000007560	SREK1	51	54.667	ENSAPEG00000003142	SRSF11	84	71.605	Amphiprion_percula
ENSCAFG00000007560	SREK1	50	53.023	ENSAPEG00000003619	SRSF11	77	69.880	Amphiprion_percula
ENSCAFG00000007560	SREK1	69	54.545	ENSATEG00000009450	srek1	50	77.889	Anabas_testudineus
ENSCAFG00000007560	SREK1	50	55.349	ENSATEG00000007534	-	77	69.880	Anabas_testudineus
ENSCAFG00000007560	SREK1	56	90.085	ENSAPLG00000003948	-	84	90.855	Anas_platyrhynchos
ENSCAFG00000007560	SREK1	51	60.360	ENSANAG00000018690	-	58	59.389	Aotus_nancymaae
ENSCAFG00000007560	SREK1	100	95.720	ENSANAG00000031358	SREK1	98	96.260	Aotus_nancymaae
ENSCAFG00000007560	SREK1	51	60.563	ENSACLG00000026754	srek1	94	81.495	Astatotilapia_calliptera
ENSCAFG00000007560	SREK1	50	52.558	ENSACLG00000019647	-	56	40.828	Astatotilapia_calliptera
ENSCAFG00000007560	SREK1	51	59.655	ENSAMXG00000043877	srek1	57	80.420	Astyanax_mexicanus
ENSCAFG00000007560	SREK1	100	95.155	ENSBTAG00000007321	SREK1	100	95.886	Bos_taurus
ENSCAFG00000007560	SREK1	100	96.109	ENSCJAG00000015950	SREK1	100	96.190	Callithrix_jacchus
ENSCAFG00000007560	SREK1	63	60.181	ENSCJAG00000017704	SRSF11	59	61.086	Callithrix_jacchus
ENSCAFG00000007560	SREK1	51	60.633	ENSCHIG00000025295	SRSF11	73	74.419	Capra_hircus
ENSCAFG00000007560	SREK1	100	95.914	ENSTSYG00000036957	SREK1	98	98.980	Carlito_syrichta
ENSCAFG00000007560	SREK1	50	56.221	ENSTSYG00000033270	-	70	65.000	Carlito_syrichta
ENSCAFG00000007560	SREK1	73	98.942	ENSCPOG00000008925	SREK1	87	79.079	Cavia_porcellus
ENSCAFG00000007560	SREK1	51	60.360	ENSCCAG00000036133	-	58	59.389	Cebus_capucinus
ENSCAFG00000007560	SREK1	100	96.109	ENSCCAG00000020591	SREK1	100	95.914	Cebus_capucinus
ENSCAFG00000007560	SREK1	51	60.360	ENSCATG00000043613	SRSF11	58	59.389	Cercocebus_atys
ENSCAFG00000007560	SREK1	100	95.098	ENSCATG00000031482	SREK1	98	97.959	Cercocebus_atys
ENSCAFG00000007560	SREK1	100	96.484	ENSCLAG00000005024	SREK1	100	96.484	Chinchilla_lanigera
ENSCAFG00000007560	SREK1	51	60.360	ENSCSAG00000001375	SRSF11	58	59.389	Chlorocebus_sabaeus
ENSCAFG00000007560	SREK1	72	91.667	ENSCHOG00000004956	SREK1	51	89.347	Choloepus_hoffmanni
ENSCAFG00000007560	SREK1	55	71.523	ENSCPBG00000026866	SREK1	87	94.828	Chrysemys_picta_bellii
ENSCAFG00000007560	SREK1	60	35.061	ENSCING00000022892	-	71	51.736	Ciona_intestinalis
ENSCAFG00000007560	SREK1	51	60.360	ENSCANG00000039796	SRSF11	58	59.389	Colobus_angolensis_palliatus
ENSCAFG00000007560	SREK1	100	94.902	ENSCANG00000030421	SREK1	98	97.959	Colobus_angolensis_palliatus
ENSCAFG00000007560	SREK1	100	84.436	ENSCGRG00001015222	-	97	87.785	Cricetulus_griseus_chok1gshd
ENSCAFG00000007560	SREK1	100	84.436	ENSCGRG00000002130	-	97	87.785	Cricetulus_griseus_crigri
ENSCAFG00000007560	SREK1	50	55.300	ENSCVAG00000006934	-	55	54.419	Cyprinodon_variegatus
ENSCAFG00000007560	SREK1	92	48.312	ENSDARG00000009764	srek1	54	79.643	Danio_rerio
ENSCAFG00000007560	SREK1	100	95.098	ENSDNOG00000010327	SREK1	98	95.908	Dasypus_novemcinctus
ENSCAFG00000007560	SREK1	51	60.360	ENSDNOG00000008603	SRSF11	58	60.811	Dasypus_novemcinctus
ENSCAFG00000007560	SREK1	51	60.181	ENSDORG00000000669	Srsf11	58	59.211	Dipodomys_ordii
ENSCAFG00000007560	SREK1	52	33.681	FBgn0024285	Srp54	52	40.283	Drosophila_melanogaster
ENSCAFG00000007560	SREK1	79	88.889	ENSETEG00000012977	SREK1	77	86.133	Echinops_telfairi
ENSCAFG00000007560	SREK1	50	55.708	ENSEBUG00000014055	srsf11	59	54.386	Eptatretus_burgeri
ENSCAFG00000007560	SREK1	51	60.181	ENSEASG00005007847	SRSF11	78	71.910	Equus_asinus_asinus
ENSCAFG00000007560	SREK1	51	59.276	ENSEEUG00000002456	SRSF11	63	55.380	Erinaceus_europaeus
ENSCAFG00000007560	SREK1	86	47.097	ENSELUG00000008230	srek1	54	77.891	Esox_lucius
ENSCAFG00000007560	SREK1	100	98.431	ENSFCAG00000040658	-	100	98.431	Felis_catus
ENSCAFG00000007560	SREK1	100	69.675	ENSFALG00000009835	SREK1	80	91.176	Ficedula_albicollis
ENSCAFG00000007560	SREK1	100	95.508	ENSFDAG00000017844	SREK1	100	95.703	Fukomys_damarensis
ENSCAFG00000007560	SREK1	50	52.535	ENSFHEG00000013348	-	55	50.896	Fundulus_heteroclitus
ENSCAFG00000007560	SREK1	54	53.586	ENSGALG00000011305	SRSF11	58	51.064	Gallus_gallus
ENSCAFG00000007560	SREK1	50	52.074	ENSGAFG00000021415	SRSF11	56	52.381	Gambusia_affinis
ENSCAFG00000007560	SREK1	51	51.584	ENSGACG00000009346	srsf11	50	52.232	Gasterosteus_aculeatus
ENSCAFG00000007560	SREK1	67	91.914	ENSGAGG00000006087	SREK1	95	93.787	Gopherus_agassizii
ENSCAFG00000007560	SREK1	100	95.098	ENSGGOG00000004737	SREK1	98	97.959	Gorilla_gorilla
ENSCAFG00000007560	SREK1	51	60.360	ENSGGOG00000005774	SRSF11	58	59.389	Gorilla_gorilla
ENSCAFG00000007560	SREK1	82	47.175	ENSHBUG00000007092	-	52	54.884	Haplochromis_burtoni
ENSCAFG00000007560	SREK1	100	96.094	ENSHGLG00000001181	SREK1	100	96.094	Heterocephalus_glaber_female
ENSCAFG00000007560	SREK1	100	88.627	ENSHGLG00100003207	SREK1	100	91.440	Heterocephalus_glaber_male
ENSCAFG00000007560	SREK1	85	49.887	ENSIPUG00000016851	srek1	54	80.287	Ictalurus_punctatus
ENSCAFG00000007560	SREK1	100	95.508	ENSSTOG00000008850	SREK1	98	97.959	Ictidomys_tridecemlineatus
ENSCAFG00000007560	SREK1	51	60.181	ENSSTOG00000008675	SRSF11	58	59.211	Ictidomys_tridecemlineatus
ENSCAFG00000007560	SREK1	50	51.121	ENSKMAG00000005868	-	56	49.270	Kryptolebias_marmoratus
ENSCAFG00000007560	SREK1	50	51.835	ENSKMAG00000009775	srsf11	50	52.423	Kryptolebias_marmoratus
ENSCAFG00000007560	SREK1	51	53.812	ENSLBEG00000024167	srsf11	83	71.605	Labrus_bergylta
ENSCAFG00000007560	SREK1	50	55.455	ENSLACG00000006575	SRSF11	65	52.564	Latimeria_chalumnae
ENSCAFG00000007560	SREK1	51	57.273	ENSLOCG00000009617	srsf11	63	50.482	Lepisosteus_oculatus
ENSCAFG00000007560	SREK1	100	91.033	ENSLAFG00000013853	SREK1	98	91.857	Loxodonta_africana
ENSCAFG00000007560	SREK1	51	60.360	ENSMFAG00000043405	SRSF11	58	59.389	Macaca_fascicularis
ENSCAFG00000007560	SREK1	100	95.098	ENSMFAG00000039823	SREK1	98	97.959	Macaca_fascicularis
ENSCAFG00000007560	SREK1	100	95.098	ENSMMUG00000014586	SREK1	100	95.098	Macaca_mulatta
ENSCAFG00000007560	SREK1	100	95.098	ENSMNEG00000030723	SREK1	98	97.959	Macaca_nemestrina
ENSCAFG00000007560	SREK1	51	60.360	ENSMNEG00000029428	SRSF11	58	59.389	Macaca_nemestrina
ENSCAFG00000007560	SREK1	100	94.902	ENSMLEG00000039078	SREK1	98	97.959	Mandrillus_leucophaeus
ENSCAFG00000007560	SREK1	51	60.360	ENSMLEG00000041592	SRSF11	58	59.389	Mandrillus_leucophaeus
ENSCAFG00000007560	SREK1	50	53.917	ENSMAMG00000015002	-	78	69.880	Mastacembelus_armatus
ENSCAFG00000007560	SREK1	50	52.558	ENSMZEG00005025071	-	56	40.828	Maylandia_zebra
ENSCAFG00000007560	SREK1	100	84.630	ENSMAUG00000010066	-	97	87.785	Mesocricetus_auratus
ENSCAFG00000007560	SREK1	100	96.667	ENSMICG00000034959	SREK1	100	96.667	Microcebus_murinus
ENSCAFG00000007560	SREK1	98	86.364	ENSMOCG00000001536	-	97	88.284	Microtus_ochrogaster
ENSCAFG00000007560	SREK1	51	54.338	ENSMMOG00000016751	-	92	61.261	Mola_mola
ENSCAFG00000007560	SREK1	97	82.160	ENSMODG00000019665	SREK1	98	78.514	Monodelphis_domestica
ENSCAFG00000007560	SREK1	70	60.227	ENSMALG00000017086	srek1	91	88.889	Monopterus_albus
ENSCAFG00000007560	SREK1	50	55.909	MGP_CAROLIEiJ_G0025767	Srsf11	85	71.765	Mus_caroli
ENSCAFG00000007560	SREK1	50	55.909	ENSMUSG00000055436	Srsf11	84	71.765	Mus_musculus
ENSCAFG00000007560	SREK1	50	55.909	MGP_PahariEiJ_G0027217	Srsf11	85	71.765	Mus_pahari
ENSCAFG00000007560	SREK1	50	55.909	MGP_SPRETEiJ_G0026719	Srsf11	85	71.765	Mus_spretus
ENSCAFG00000007560	SREK1	100	98.089	ENSMPUG00000014736	SREK1	100	98.089	Mustela_putorius_furo
ENSCAFG00000007560	SREK1	51	60.360	ENSMPUG00000000892	SRSF11	58	59.389	Mustela_putorius_furo
ENSCAFG00000007560	SREK1	100	95.155	ENSMLUG00000014801	SREK1	100	95.736	Myotis_lucifugus
ENSCAFG00000007560	SREK1	82	47.458	ENSNBRG00000012193	-	64	47.419	Neolamprologus_brichardi
ENSCAFG00000007560	SREK1	100	95.294	ENSNLEG00000003827	SREK1	100	96.349	Nomascus_leucogenys
ENSCAFG00000007560	SREK1	51	60.360	ENSNLEG00000009400	SRSF11	59	59.389	Nomascus_leucogenys
ENSCAFG00000007560	SREK1	88	88.248	ENSOPRG00000012111	SREK1	68	97.326	Ochotona_princeps
ENSCAFG00000007560	SREK1	97	94.212	ENSODEG00000016450	SREK1	100	94.411	Octodon_degus
ENSCAFG00000007560	SREK1	51	60.563	ENSONIG00000011080	srek1	65	80.851	Oreochromis_niloticus
ENSCAFG00000007560	SREK1	56	72.876	ENSOANG00000005029	SREK1	75	91.202	Ornithorhynchus_anatinus
ENSCAFG00000007560	SREK1	100	91.033	ENSOCUG00000001319	SREK1	97	92.333	Oryctolagus_cuniculus
ENSCAFG00000007560	SREK1	52	59.111	ENSOCUG00000025440	-	50	58.482	Oryctolagus_cuniculus
ENSCAFG00000007560	SREK1	89	51.948	ENSOCUG00000024114	-	50	58.036	Oryctolagus_cuniculus
ENSCAFG00000007560	SREK1	53	57.940	ENSOCUG00000002001	-	63	54.952	Oryctolagus_cuniculus
ENSCAFG00000007560	SREK1	50	56.279	ENSORLG00020009393	-	74	69.880	Oryzias_latipes_hni
ENSCAFG00000007560	SREK1	50	56.279	ENSORLG00015009374	-	74	69.880	Oryzias_latipes_hsok
ENSCAFG00000007560	SREK1	51	49.470	ENSOMEG00000015817	srek1	56	70.251	Oryzias_melastigma
ENSCAFG00000007560	SREK1	100	93.922	ENSOGAG00000016463	SREK1	100	93.922	Otolemur_garnettii
ENSCAFG00000007560	SREK1	100	93.992	ENSOARG00000006005	SREK1	98	94.814	Ovis_aries
ENSCAFG00000007560	SREK1	100	88.039	ENSPPAG00000031605	SREK1	92	100.000	Pan_paniscus
ENSCAFG00000007560	SREK1	51	60.538	ENSPPAG00000036149	SRSF11	58	59.565	Pan_paniscus
ENSCAFG00000007560	SREK1	51	60.360	ENSPPRG00000002720	SRSF11	66	59.389	Panthera_pardus
ENSCAFG00000007560	SREK1	100	98.039	ENSPPRG00000024617	SREK1	100	98.039	Panthera_pardus
ENSCAFG00000007560	SREK1	100	97.647	ENSPTIG00000006608	SREK1	100	97.604	Panthera_tigris_altaica
ENSCAFG00000007560	SREK1	100	94.902	ENSPTRG00000016936	SREK1	98	97.959	Pan_troglodytes
ENSCAFG00000007560	SREK1	51	60.811	ENSPTRG00000000852	SRSF11	58	59.565	Pan_troglodytes
ENSCAFG00000007560	SREK1	51	60.360	ENSPANG00000018677	SRSF11	58	59.389	Papio_anubis
ENSCAFG00000007560	SREK1	100	95.098	ENSPANG00000008953	SREK1	98	97.959	Papio_anubis
ENSCAFG00000007560	SREK1	63	72.774	ENSPKIG00000025563	srek1	54	82.807	Paramormyrops_kingsleyae
ENSCAFG00000007560	SREK1	50	56.364	ENSPSIG00000005152	SRSF11	62	54.808	Pelodiscus_sinensis
ENSCAFG00000007560	SREK1	100	81.907	ENSPEMG00000024051	-	88	96.739	Peromyscus_maniculatus_bairdii
ENSCAFG00000007560	SREK1	50	52.074	ENSPFOG00000014895	-	56	50.000	Poecilia_formosa
ENSCAFG00000007560	SREK1	50	52.535	ENSPLAG00000009484	-	87	52.381	Poecilia_latipinna
ENSCAFG00000007560	SREK1	50	52.074	ENSPMEG00000023453	-	87	52.381	Poecilia_mexicana
ENSCAFG00000007560	SREK1	50	52.995	ENSPREG00000009065	SRSF11	56	50.000	Poecilia_reticulata
ENSCAFG00000007560	SREK1	100	95.294	ENSPPYG00000015515	SREK1	100	96.349	Pongo_abelii
ENSCAFG00000007560	SREK1	51	60.360	ENSPPYG00000001245	SRSF11	58	59.389	Pongo_abelii
ENSCAFG00000007560	SREK1	96	89.409	ENSPCAG00000004955	SREK1	100	88.153	Procavia_capensis
ENSCAFG00000007560	SREK1	100	96.667	ENSPCOG00000026230	SREK1	98	98.980	Propithecus_coquereli
ENSCAFG00000007560	SREK1	51	54.751	ENSPVAG00000011918	SRSF11	66	55.204	Pteropus_vampyrus
ENSCAFG00000007560	SREK1	100	95.331	ENSPVAG00000009763	SREK1	100	96.190	Pteropus_vampyrus
ENSCAFG00000007560	SREK1	82	45.763	ENSPNYG00000014732	-	56	40.708	Pundamilia_nyererei
ENSCAFG00000007560	SREK1	87	53.478	ENSPNAG00000004328	srek1	57	83.746	Pygocentrus_nattereri
ENSCAFG00000007560	SREK1	98	88.871	ENSRBIG00000033818	SREK1	98	97.959	Rhinopithecus_bieti
ENSCAFG00000007560	SREK1	51	60.360	ENSRBIG00000042971	SRSF11	66	74.419	Rhinopithecus_bieti
ENSCAFG00000007560	SREK1	100	95.098	ENSRROG00000017210	SREK1	98	97.959	Rhinopithecus_roxellana
ENSCAFG00000007560	SREK1	51	60.360	ENSRROG00000039667	SRSF11	58	59.389	Rhinopithecus_roxellana
ENSCAFG00000007560	SREK1	51	60.360	ENSSBOG00000033461	SRSF11	66	74.419	Saimiri_boliviensis_boliviensis
ENSCAFG00000007560	SREK1	100	96.109	ENSSBOG00000031230	SREK1	100	95.914	Saimiri_boliviensis_boliviensis
ENSCAFG00000007560	SREK1	100	81.018	ENSSHAG00000003514	SREK1	100	81.092	Sarcophilus_harrisii
ENSCAFG00000007560	SREK1	65	73.236	ENSSFOG00015004995	srek1	64	65.633	Scleropages_formosus
ENSCAFG00000007560	SREK1	68	57.053	ENSSMAG00000011808	srek1	58	81.362	Scophthalmus_maximus
ENSCAFG00000007560	SREK1	50	53.023	ENSSLDG00000012105	-	77	69.880	Seriola_lalandi_dorsalis
ENSCAFG00000007560	SREK1	83	91.667	ENSSARG00000000795	SREK1	68	97.941	Sorex_araneus
ENSCAFG00000007560	SREK1	51	58.559	ENSSPUG00000016145	SRSF11	65	55.128	Sphenodon_punctatus
ENSCAFG00000007560	SREK1	50	68.929	ENSSPUG00000016553	SREK1	90	91.756	Sphenodon_punctatus
ENSCAFG00000007560	SREK1	50	53.023	ENSSPAG00000016483	-	66	70.732	Stegastes_partitus
ENSCAFG00000007560	SREK1	100	96.311	ENSSSCG00000032726	SREK1	100	96.505	Sus_scrofa
ENSCAFG00000007560	SREK1	100	72.374	ENSTGUG00000002935	SREK1	54	91.241	Taeniopygia_guttata
ENSCAFG00000007560	SREK1	76	48.250	ENSTNIG00000013463	srek1	68	78.136	Tetraodon_nigroviridis
ENSCAFG00000007560	SREK1	100	96.693	ENSTTRG00000009684	SREK1	100	97.049	Tursiops_truncatus
ENSCAFG00000007560	SREK1	100	97.778	ENSUMAG00000008191	SREK1	100	97.778	Ursus_maritimus
ENSCAFG00000007560	SREK1	51	60.360	ENSUMAG00000006618	SRSF11	50	59.389	Ursus_maritimus
ENSCAFG00000007560	SREK1	100	96.275	ENSVPAG00000008654	SREK1	100	96.678	Vicugna_pacos
ENSCAFG00000007560	SREK1	90	53.862	ENSXETG00000021460	srek1	76	68.932	Xenopus_tropicalis
ENSCAFG00000007560	SREK1	50	52.995	ENSXMAG00000019180	SRSF11	83	52.381	Xiphophorus_maculatus