EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000007982 (Gene tree)
Gene ID: 610392
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 31556 bases
Position: chr2:55351558-55383113
Accession: 45131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000011801	MRP-S27	PF10037.9	4.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000012743	-	2250	XM_847890	ENSCAFP00000011801	426 (aa)	XP_852983	F1Q1A5

Gene Model

Click here to download ENSCAFG00000007982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000007982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000007982	PTCD2	90	76.883	ENSG00000049883	PTCD2	100	79.310	Homo_sapiens
ENSCAFG00000007982	PTCD2	86	47.268	ENSAPOG00000020682	ptcd2	94	47.268	Acanthochromis_polyacanthus
ENSCAFG00000007982	PTCD2	91	86.047	ENSAMEG00000007194	PTCD2	99	86.047	Ailuropoda_melanoleuca
ENSCAFG00000007982	PTCD2	81	43.266	ENSACIG00000002053	ptcd2	100	43.266	Amphilophus_citrinellus
ENSCAFG00000007982	PTCD2	86	46.721	ENSAOCG00000006616	ptcd2	94	46.011	Amphiprion_ocellaris
ENSCAFG00000007982	PTCD2	86	46.505	ENSAPEG00000022926	ptcd2	94	45.812	Amphiprion_percula
ENSCAFG00000007982	PTCD2	91	57.069	ENSACAG00000009747	PTCD2	99	57.069	Anolis_carolinensis
ENSCAFG00000007982	PTCD2	90	78.961	ENSANAG00000029353	PTCD2	99	78.961	Aotus_nancymaae
ENSCAFG00000007982	PTCD2	91	46.667	ENSACLG00000027742	ptcd2	99	46.667	Astatotilapia_calliptera
ENSCAFG00000007982	PTCD2	81	45.797	ENSAMXG00000029404	ptcd2	91	45.797	Astyanax_mexicanus
ENSCAFG00000007982	PTCD2	90	78.906	ENSBTAG00000014675	PTCD2	100	78.906	Bos_taurus
ENSCAFG00000007982	PTCD2	90	78.182	ENSCJAG00000016364	PTCD2	99	78.182	Callithrix_jacchus
ENSCAFG00000007982	PTCD2	81	100.000	ENSCAFG00020019147	PTCD2	97	100.000	Canis_lupus_dingo
ENSCAFG00000007982	PTCD2	90	78.906	ENSCHIG00000017118	PTCD2	100	78.906	Capra_hircus
ENSCAFG00000007982	PTCD2	90	71.018	ENSCPOG00000040168	PTCD2	100	71.018	Cavia_porcellus
ENSCAFG00000007982	PTCD2	73	72.990	ENSCCAG00000021996	-	95	72.078	Cebus_capucinus
ENSCAFG00000007982	PTCD2	90	77.461	ENSCCAG00000029389	-	99	77.461	Cebus_capucinus
ENSCAFG00000007982	PTCD2	90	75.457	ENSCATG00000019069	PTCD2	100	75.457	Cercocebus_atys
ENSCAFG00000007982	PTCD2	90	71.802	ENSCLAG00000000072	PTCD2	100	71.802	Chinchilla_lanigera
ENSCAFG00000007982	PTCD2	90	77.546	ENSCSAG00000015623	PTCD2	100	77.546	Chlorocebus_sabaeus
ENSCAFG00000007982	PTCD2	81	57.759	ENSCHOG00000010634	PTCD2	100	57.759	Choloepus_hoffmanni
ENSCAFG00000007982	PTCD2	91	56.410	ENSCPBG00000000216	PTCD2	99	56.410	Chrysemys_picta_bellii
ENSCAFG00000007982	PTCD2	90	75.584	ENSCANG00000035636	PTCD2	99	75.584	Colobus_angolensis_palliatus
ENSCAFG00000007982	PTCD2	100	67.667	ENSCGRG00001015289	Ptcd2	93	66.136	Cricetulus_griseus_chok1gshd
ENSCAFG00000007982	PTCD2	100	67.667	ENSCGRG00000006193	Ptcd2	93	66.136	Cricetulus_griseus_crigri
ENSCAFG00000007982	PTCD2	82	46.264	ENSCVAG00000001285	ptcd2	94	44.149	Cyprinodon_variegatus
ENSCAFG00000007982	PTCD2	87	45.040	ENSDARG00000035391	ptcd2	97	45.040	Danio_rerio
ENSCAFG00000007982	PTCD2	90	76.240	ENSDNOG00000008719	PTCD2	100	76.240	Dasypus_novemcinctus
ENSCAFG00000007982	PTCD2	90	74.677	ENSDORG00000004921	Ptcd2	100	74.677	Dipodomys_ordii
ENSCAFG00000007982	PTCD2	90	69.430	ENSETEG00000016542	PTCD2	99	69.430	Echinops_telfairi
ENSCAFG00000007982	PTCD2	90	79.634	ENSEASG00005018038	PTCD2	100	79.634	Equus_asinus_asinus
ENSCAFG00000007982	PTCD2	90	79.167	ENSECAG00000007022	PTCD2	99	79.167	Equus_caballus
ENSCAFG00000007982	PTCD2	90	70.833	ENSEEUG00000014031	PTCD2	99	70.833	Erinaceus_europaeus
ENSCAFG00000007982	PTCD2	88	48.942	ENSELUG00000003584	ptcd2	96	48.942	Esox_lucius
ENSCAFG00000007982	PTCD2	97	74.092	ENSFCAG00000045432	PTCD2	88	74.755	Felis_catus
ENSCAFG00000007982	PTCD2	77	53.211	ENSFALG00000010299	PTCD2	99	53.211	Ficedula_albicollis
ENSCAFG00000007982	PTCD2	90	71.802	ENSFDAG00000018461	PTCD2	100	71.802	Fukomys_damarensis
ENSCAFG00000007982	PTCD2	82	50.712	ENSGMOG00000003637	ptcd2	91	50.712	Gadus_morhua
ENSCAFG00000007982	PTCD2	83	51.977	ENSGALG00000038260	PTCD2	100	50.260	Gallus_gallus
ENSCAFG00000007982	PTCD2	91	57.949	ENSGAGG00000021952	PTCD2	99	57.949	Gopherus_agassizii
ENSCAFG00000007982	PTCD2	90	76.883	ENSGGOG00000010695	PTCD2	99	76.883	Gorilla_gorilla
ENSCAFG00000007982	PTCD2	91	46.667	ENSHBUG00000009191	ptcd2	99	46.667	Haplochromis_burtoni
ENSCAFG00000007982	PTCD2	90	71.990	ENSHGLG00000001234	PTCD2	99	71.990	Heterocephalus_glaber_female
ENSCAFG00000007982	PTCD2	90	71.990	ENSHGLG00100015419	PTCD2	99	71.990	Heterocephalus_glaber_male
ENSCAFG00000007982	PTCD2	85	47.934	ENSHCOG00000001703	ptcd2	92	47.934	Hippocampus_comes
ENSCAFG00000007982	PTCD2	80	46.491	ENSIPUG00000006080	ptcd2	94	45.455	Ictalurus_punctatus
ENSCAFG00000007982	PTCD2	90	76.302	ENSSTOG00000006596	PTCD2	100	76.302	Ictidomys_tridecemlineatus
ENSCAFG00000007982	PTCD2	90	74.413	ENSJJAG00000024388	Ptcd2	100	74.413	Jaculus_jaculus
ENSCAFG00000007982	PTCD2	85	44.751	ENSKMAG00000009329	ptcd2	94	44.751	Kryptolebias_marmoratus
ENSCAFG00000007982	PTCD2	89	46.982	ENSLBEG00000024871	ptcd2	95	46.982	Labrus_bergylta
ENSCAFG00000007982	PTCD2	88	53.141	ENSLOCG00000011122	ptcd2	99	53.141	Lepisosteus_oculatus
ENSCAFG00000007982	PTCD2	73	76.527	ENSLAFG00000004115	PTCD2	100	76.527	Loxodonta_africana
ENSCAFG00000007982	PTCD2	90	76.104	ENSMFAG00000031516	PTCD2	99	76.104	Macaca_fascicularis
ENSCAFG00000007982	PTCD2	90	75.457	ENSMNEG00000007537	PTCD2	100	75.457	Macaca_nemestrina
ENSCAFG00000007982	PTCD2	90	75.584	ENSMLEG00000031093	PTCD2	99	75.584	Mandrillus_leucophaeus
ENSCAFG00000007982	PTCD2	86	47.814	ENSMAMG00000018529	ptcd2	94	47.814	Mastacembelus_armatus
ENSCAFG00000007982	PTCD2	91	46.667	ENSMZEG00005003625	ptcd2	99	46.667	Maylandia_zebra
ENSCAFG00000007982	PTCD2	82	52.586	ENSMGAG00000005033	PTCD2	100	52.586	Meleagris_gallopavo
ENSCAFG00000007982	PTCD2	90	55.875	ENSMAUG00000020253	Ptcd2	100	55.875	Mesocricetus_auratus
ENSCAFG00000007982	PTCD2	91	78.238	ENSMICG00000004535	PTCD2	99	78.238	Microcebus_murinus
ENSCAFG00000007982	PTCD2	90	72.585	ENSMOCG00000019985	Ptcd2	100	72.585	Microtus_ochrogaster
ENSCAFG00000007982	PTCD2	90	58.594	ENSMODG00000001695	PTCD2	100	58.594	Monodelphis_domestica
ENSCAFG00000007982	PTCD2	86	47.541	ENSMALG00000022372	ptcd2	94	47.541	Monopterus_albus
ENSCAFG00000007982	PTCD2	90	71.018	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.018	Mus_caroli
ENSCAFG00000007982	PTCD2	90	69.713	ENSMUSG00000021650	Ptcd2	100	69.713	Mus_musculus
ENSCAFG00000007982	PTCD2	90	73.368	MGP_PahariEiJ_G0015904	Ptcd2	100	73.368	Mus_pahari
ENSCAFG00000007982	PTCD2	90	70.496	MGP_SPRETEiJ_G0019711	Ptcd2	100	70.496	Mus_spretus
ENSCAFG00000007982	PTCD2	90	87.206	ENSMPUG00000014401	PTCD2	100	87.206	Mustela_putorius_furo
ENSCAFG00000007982	PTCD2	90	78.961	ENSMLUG00000007374	PTCD2	99	78.961	Myotis_lucifugus
ENSCAFG00000007982	PTCD2	90	72.063	ENSNGAG00000005027	Ptcd2	100	72.063	Nannospalax_galili
ENSCAFG00000007982	PTCD2	77	48.640	ENSNBRG00000000092	-	100	48.640	Neolamprologus_brichardi
ENSCAFG00000007982	PTCD2	89	47.273	ENSNBRG00000008174	ptcd2	92	48.870	Neolamprologus_brichardi
ENSCAFG00000007982	PTCD2	90	76.623	ENSNLEG00000004516	PTCD2	99	76.623	Nomascus_leucogenys
ENSCAFG00000007982	PTCD2	90	47.258	ENSMEUG00000014012	-	99	47.258	Notamacropus_eugenii
ENSCAFG00000007982	PTCD2	91	71.907	ENSOPRG00000007290	PTCD2	100	71.907	Ochotona_princeps
ENSCAFG00000007982	PTCD2	87	74.595	ENSODEG00000016417	PTCD2	100	73.107	Octodon_degus
ENSCAFG00000007982	PTCD2	77	47.879	ENSONIG00000011269	ptcd2	96	47.879	Oreochromis_niloticus
ENSCAFG00000007982	PTCD2	86	76.438	ENSOCUG00000007970	PTCD2	99	76.440	Oryctolagus_cuniculus
ENSCAFG00000007982	PTCD2	90	45.663	ENSORLG00000003851	ptcd2	92	46.467	Oryzias_latipes
ENSCAFG00000007982	PTCD2	86	45.924	ENSORLG00020009823	ptcd2	94	45.924	Oryzias_latipes_hni
ENSCAFG00000007982	PTCD2	82	46.571	ENSORLG00015016777	ptcd2	99	46.724	Oryzias_latipes_hsok
ENSCAFG00000007982	PTCD2	90	44.186	ENSOMEG00000012396	ptcd2	93	44.186	Oryzias_melastigma
ENSCAFG00000007982	PTCD2	90	74.805	ENSOGAG00000008390	PTCD2	99	74.805	Otolemur_garnettii
ENSCAFG00000007982	PTCD2	90	78.238	ENSOARG00000005087	PTCD2	99	78.238	Ovis_aries
ENSCAFG00000007982	PTCD2	90	76.883	ENSPPAG00000028480	PTCD2	99	76.883	Pan_paniscus
ENSCAFG00000007982	PTCD2	90	76.364	ENSPTRG00000016968	PTCD2	99	76.364	Pan_troglodytes
ENSCAFG00000007982	PTCD2	81	77.971	ENSPANG00000006611	PTCD2	89	77.971	Papio_anubis
ENSCAFG00000007982	PTCD2	82	49.575	ENSPKIG00000019896	ptcd2	92	49.575	Paramormyrops_kingsleyae
ENSCAFG00000007982	PTCD2	74	62.540	ENSPSIG00000014559	PTCD2	98	62.540	Pelodiscus_sinensis
ENSCAFG00000007982	PTCD2	90	71.169	ENSPEMG00000000884	Ptcd2	100	71.169	Peromyscus_maniculatus_bairdii
ENSCAFG00000007982	PTCD2	90	60.156	ENSPCIG00000029047	PTCD2	100	60.156	Phascolarctos_cinereus
ENSCAFG00000007982	PTCD2	78	46.687	ENSPLAG00000010456	ptcd2	91	46.176	Poecilia_latipinna
ENSCAFG00000007982	PTCD2	82	46.552	ENSPREG00000021797	ptcd2	88	46.552	Poecilia_reticulata
ENSCAFG00000007982	PTCD2	90	69.091	ENSPPYG00000015543	PTCD2	99	69.091	Pongo_abelii
ENSCAFG00000007982	PTCD2	73	67.203	ENSPCAG00000006806	PTCD2	99	67.203	Procavia_capensis
ENSCAFG00000007982	PTCD2	90	76.623	ENSPVAG00000010935	PTCD2	99	76.623	Pteropus_vampyrus
ENSCAFG00000007982	PTCD2	91	46.667	ENSPNYG00000003122	ptcd2	99	46.667	Pundamilia_nyererei
ENSCAFG00000007982	PTCD2	86	50.272	ENSPNAG00000021490	ptcd2	95	50.543	Pygocentrus_nattereri
ENSCAFG00000007982	PTCD2	90	73.629	ENSRNOG00000028403	Ptcd2	100	73.629	Rattus_norvegicus
ENSCAFG00000007982	PTCD2	90	72.468	ENSRBIG00000032929	PTCD2	99	72.468	Rhinopithecus_bieti
ENSCAFG00000007982	PTCD2	90	77.023	ENSRROG00000000080	PTCD2	100	77.023	Rhinopithecus_roxellana
ENSCAFG00000007982	PTCD2	90	76.823	ENSSBOG00000018911	PTCD2	100	76.823	Saimiri_boliviensis_boliviensis
ENSCAFG00000007982	PTCD2	90	59.115	ENSSHAG00000003833	PTCD2	99	59.115	Sarcophilus_harrisii
ENSCAFG00000007982	PTCD2	76	50.464	ENSSFOG00015015415	ptcd2	84	50.464	Scleropages_formosus
ENSCAFG00000007982	PTCD2	81	45.533	ENSSMAG00000010350	ptcd2	90	45.533	Scophthalmus_maximus
ENSCAFG00000007982	PTCD2	86	47.541	ENSSDUG00000008142	ptcd2	90	47.541	Seriola_dumerili
ENSCAFG00000007982	PTCD2	86	47.541	ENSSLDG00000015284	ptcd2	94	47.541	Seriola_lalandi_dorsalis
ENSCAFG00000007982	PTCD2	73	68.065	ENSSARG00000004983	PTCD2	99	68.065	Sorex_araneus
ENSCAFG00000007982	PTCD2	90	51.958	ENSSPUG00000000176	PTCD2	96	51.958	Sphenodon_punctatus
ENSCAFG00000007982	PTCD2	87	45.799	ENSSPAG00000008591	ptcd2	93	45.799	Stegastes_partitus
ENSCAFG00000007982	PTCD2	98	75.179	ENSSSCG00000016975	PTCD2	95	77.778	Sus_scrofa
ENSCAFG00000007982	PTCD2	80	54.118	ENSTGUG00000005705	PTCD2	98	54.118	Taeniopygia_guttata
ENSCAFG00000007982	PTCD2	90	74.286	ENSTBEG00000016559	PTCD2	99	74.286	Tupaia_belangeri
ENSCAFG00000007982	PTCD2	90	79.275	ENSTTRG00000011851	PTCD2	99	79.275	Tursiops_truncatus
ENSCAFG00000007982	PTCD2	100	82.904	ENSUAMG00000007583	PTCD2	100	82.904	Ursus_americanus
ENSCAFG00000007982	PTCD2	90	86.423	ENSUMAG00000007666	PTCD2	100	86.423	Ursus_maritimus
ENSCAFG00000007982	PTCD2	90	79.275	ENSVPAG00000009597	PTCD2	99	79.275	Vicugna_pacos
ENSCAFG00000007982	PTCD2	90	98.695	ENSVVUG00000007299	-	100	98.695	Vulpes_vulpes
ENSCAFG00000007982	PTCD2	88	51.467	ENSXETG00000031652	PTCD2	95	51.467	Xenopus_tropicalis
ENSCAFG00000007982	PTCD2	77	47.866	ENSXMAG00000005940	ptcd2	83	45.609	Xiphophorus_maculatus