EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000008060 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 1824 bases
Position: chr18:39600401-39602224
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000035718	THUMP	PF02926.17	6.7e-12	1	1
ENSCAFP00000035718	UPF0020	PF01170.18	2.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000012854	-	1575	-	ENSCAFP00000035718	411 (aa)	-	F6XPR6

Gene Model

Click here to download ENSCAFG00000008060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000008060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000008060	-	94	98.701	ENSCAFG00000005499	THUMPD3	77	98.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000008060	-	94	87.013	ENSG00000134077	THUMPD3	98	86.784	Homo_sapiens
ENSCAFG00000008060	-	93	59.318	ENSAPOG00000015836	thumpd3	75	59.318	Acanthochromis_polyacanthus
ENSCAFG00000008060	-	94	93.506	ENSAMEG00000011321	THUMPD3	77	93.506	Ailuropoda_melanoleuca
ENSCAFG00000008060	-	93	58.793	ENSACIG00000020096	thumpd3	73	59.580	Amphilophus_citrinellus
ENSCAFG00000008060	-	96	58.734	ENSAOCG00000004399	thumpd3	75	56.962	Amphiprion_ocellaris
ENSCAFG00000008060	-	93	59.843	ENSAPEG00000016740	thumpd3	73	59.843	Amphiprion_percula
ENSCAFG00000008060	-	93	59.580	ENSATEG00000005345	thumpd3	74	59.299	Anabas_testudineus
ENSCAFG00000008060	-	91	69.841	ENSAPLG00000003598	THUMPD3	95	69.841	Anas_platyrhynchos
ENSCAFG00000008060	-	93	65.111	ENSACAG00000014974	THUMPD3	78	65.111	Anolis_carolinensis
ENSCAFG00000008060	-	94	86.234	ENSANAG00000002365	THUMPD3	77	86.234	Aotus_nancymaae
ENSCAFG00000008060	-	52	32.864	ENSACLG00000025840	thumpd2	76	31.579	Astatotilapia_calliptera
ENSCAFG00000008060	-	72	70.130	ENSACLG00000013504	-	64	70.130	Astatotilapia_calliptera
ENSCAFG00000008060	-	93	59.055	ENSACLG00000023333	thumpd3	73	58.225	Astatotilapia_calliptera
ENSCAFG00000008060	-	93	58.290	ENSAMXG00000015683	thumpd3	77	58.290	Astyanax_mexicanus
ENSCAFG00000008060	-	93	87.206	ENSBTAG00000003112	THUMPD3	76	87.206	Bos_taurus
ENSCAFG00000008060	-	55	48.230	WBGene00010846	M04B2.2	55	48.230	Caenorhabditis_elegans
ENSCAFG00000008060	-	94	85.714	ENSCJAG00000015949	THUMPD3	76	85.714	Callithrix_jacchus
ENSCAFG00000008060	-	96	100.000	ENSCAFG00020025887	-	91	100.000	Canis_lupus_dingo
ENSCAFG00000008060	-	94	98.701	ENSCAFG00020008895	-	77	98.701	Canis_lupus_dingo
ENSCAFG00000008060	-	93	88.251	ENSCHIG00000024037	THUMPD3	76	88.251	Capra_hircus
ENSCAFG00000008060	-	94	87.532	ENSTSYG00000000159	THUMPD3	77	87.532	Carlito_syrichta
ENSCAFG00000008060	-	55	34.361	ENSTSYG00000010555	THUMPD2	51	34.361	Carlito_syrichta
ENSCAFG00000008060	-	77	65.190	ENSCAPG00000017486	THUMPD3	61	65.190	Cavia_aperea
ENSCAFG00000008060	-	94	87.273	ENSCPOG00000033287	THUMPD3	76	87.273	Cavia_porcellus
ENSCAFG00000008060	-	94	77.662	ENSCCAG00000021429	-	78	77.662	Cebus_capucinus
ENSCAFG00000008060	-	94	86.753	ENSCCAG00000027067	-	77	86.753	Cebus_capucinus
ENSCAFG00000008060	-	54	33.036	ENSCATG00000012396	THUMPD2	50	33.036	Cercocebus_atys
ENSCAFG00000008060	-	94	85.974	ENSCATG00000040999	THUMPD3	77	85.974	Cercocebus_atys
ENSCAFG00000008060	-	94	88.312	ENSCLAG00000000690	THUMPD3	76	88.312	Chinchilla_lanigera
ENSCAFG00000008060	-	54	33.036	ENSCSAG00000012431	THUMPD2	50	33.036	Chlorocebus_sabaeus
ENSCAFG00000008060	-	94	86.234	ENSCSAG00000010753	THUMPD3	77	86.234	Chlorocebus_sabaeus
ENSCAFG00000008060	-	77	58.772	ENSCHOG00000012851	THUMPD3	58	57.018	Choloepus_hoffmanni
ENSCAFG00000008060	-	94	68.342	ENSCPBG00000014771	THUMPD3	78	68.342	Chrysemys_picta_bellii
ENSCAFG00000008060	-	93	40.000	ENSCSAVG00000008668	-	80	39.740	Ciona_savignyi
ENSCAFG00000008060	-	94	85.974	ENSCANG00000031901	THUMPD3	77	85.974	Colobus_angolensis_palliatus
ENSCAFG00000008060	-	94	84.416	ENSCGRG00001024117	Thumpd3	76	84.416	Cricetulus_griseus_chok1gshd
ENSCAFG00000008060	-	94	84.416	ENSCGRG00000018116	Thumpd3	76	84.416	Cricetulus_griseus_crigri
ENSCAFG00000008060	-	93	59.269	ENSCSEG00000002546	thumpd3	75	58.747	Cynoglossus_semilaevis
ENSCAFG00000008060	-	93	59.055	ENSCVAG00000001019	thumpd3	73	59.055	Cyprinodon_variegatus
ENSCAFG00000008060	-	93	61.942	ENSDARG00000059634	thumpd3	78	60.519	Danio_rerio
ENSCAFG00000008060	-	55	31.304	ENSDARG00000093070	thumpd2	50	31.092	Danio_rerio
ENSCAFG00000008060	-	94	88.342	ENSDNOG00000047668	THUMPD3	81	86.804	Dasypus_novemcinctus
ENSCAFG00000008060	-	94	87.047	ENSDORG00000003257	Thumpd3	77	87.047	Dipodomys_ordii
ENSCAFG00000008060	-	63	78.682	ENSETEG00000020239	-	51	78.682	Echinops_telfairi
ENSCAFG00000008060	-	93	52.972	ENSEBUG00000004221	thumpd3	86	52.713	Eptatretus_burgeri
ENSCAFG00000008060	-	94	89.610	ENSEASG00005013327	THUMPD3	77	89.610	Equus_asinus_asinus
ENSCAFG00000008060	-	94	92.727	ENSECAG00000002016	THUMPD3	77	92.727	Equus_caballus
ENSCAFG00000008060	-	95	80.256	ENSEEUG00000014696	THUMPD3	77	80.256	Erinaceus_europaeus
ENSCAFG00000008060	-	78	70.196	ENSELUG00000018246	thumpd3	56	70.196	Esox_lucius
ENSCAFG00000008060	-	63	30.370	ENSELUG00000003735	thumpd2	51	30.370	Esox_lucius
ENSCAFG00000008060	-	94	93.247	ENSFCAG00000006171	THUMPD3	76	93.247	Felis_catus
ENSCAFG00000008060	-	91	64.194	ENSFALG00000013631	THUMPD3	80	64.194	Ficedula_albicollis
ENSCAFG00000008060	-	94	87.532	ENSFDAG00000014825	THUMPD3	76	87.532	Fukomys_damarensis
ENSCAFG00000008060	-	93	58.486	ENSFHEG00000006006	thumpd3	74	57.692	Fundulus_heteroclitus
ENSCAFG00000008060	-	94	56.477	ENSGMOG00000007923	thumpd3	75	56.477	Gadus_morhua
ENSCAFG00000008060	-	93	64.619	ENSGALG00000044813	THUMPD3	81	65.356	Gallus_gallus
ENSCAFG00000008060	-	56	33.043	ENSGALG00000009119	THUMPD2	52	33.043	Gallus_gallus
ENSCAFG00000008060	-	93	60.313	ENSGAFG00000021645	thumpd3	73	60.313	Gambusia_affinis
ENSCAFG00000008060	-	93	58.656	ENSGACG00000000930	thumpd3	78	57.364	Gasterosteus_aculeatus
ENSCAFG00000008060	-	94	69.095	ENSGAGG00000022750	THUMPD3	78	69.095	Gopherus_agassizii
ENSCAFG00000008060	-	94	86.494	ENSGGOG00000000604	THUMPD3	76	86.494	Gorilla_gorilla
ENSCAFG00000008060	-	58	32.922	ENSHBUG00000011780	-	51	32.273	Haplochromis_burtoni
ENSCAFG00000008060	-	93	59.580	ENSHBUG00000013405	thumpd3	73	58.225	Haplochromis_burtoni
ENSCAFG00000008060	-	94	86.494	ENSHGLG00000016200	THUMPD3	76	86.494	Heterocephalus_glaber_female
ENSCAFG00000008060	-	94	74.227	ENSHGLG00100000505	-	78	74.227	Heterocephalus_glaber_male
ENSCAFG00000008060	-	94	87.013	ENSHGLG00100017321	-	76	87.013	Heterocephalus_glaber_male
ENSCAFG00000008060	-	93	56.510	ENSHCOG00000004871	thumpd3	77	57.552	Hippocampus_comes
ENSCAFG00000008060	-	93	58.901	ENSIPUG00000019415	THUMPD3	75	57.732	Ictalurus_punctatus
ENSCAFG00000008060	-	94	89.610	ENSSTOG00000003973	THUMPD3	76	89.610	Ictidomys_tridecemlineatus
ENSCAFG00000008060	-	94	75.325	ENSJJAG00000017751	Thumpd3	73	75.325	Jaculus_jaculus
ENSCAFG00000008060	-	93	58.901	ENSKMAG00000021025	thumpd3	69	58.901	Kryptolebias_marmoratus
ENSCAFG00000008060	-	93	58.701	ENSLBEG00000012252	thumpd3	73	57.702	Labrus_bergylta
ENSCAFG00000008060	-	93	61.440	ENSLACG00000018604	THUMPD3	76	61.440	Latimeria_chalumnae
ENSCAFG00000008060	-	93	61.153	ENSLOCG00000009800	thumpd3	80	61.153	Lepisosteus_oculatus
ENSCAFG00000008060	-	94	88.601	ENSLAFG00000005103	THUMPD3	76	88.601	Loxodonta_africana
ENSCAFG00000008060	-	94	86.234	ENSMFAG00000044884	THUMPD3	77	86.234	Macaca_fascicularis
ENSCAFG00000008060	-	94	86.234	ENSMMUG00000017307	THUMPD3	77	86.234	Macaca_mulatta
ENSCAFG00000008060	-	94	86.234	ENSMNEG00000030529	THUMPD3	77	86.234	Macaca_nemestrina
ENSCAFG00000008060	-	94	85.714	ENSMLEG00000032943	THUMPD3	77	85.714	Mandrillus_leucophaeus
ENSCAFG00000008060	-	93	59.115	ENSMAMG00000023934	thumpd3	74	58.824	Mastacembelus_armatus
ENSCAFG00000008060	-	93	59.055	ENSMZEG00005010623	thumpd3	73	58.225	Maylandia_zebra
ENSCAFG00000008060	-	93	65.885	ENSMGAG00000010182	THUMPD3	95	66.667	Meleagris_gallopavo
ENSCAFG00000008060	-	94	86.234	ENSMAUG00000012250	Thumpd3	76	86.234	Mesocricetus_auratus
ENSCAFG00000008060	-	94	81.704	ENSMICG00000010095	THUMPD3	77	80.835	Microcebus_murinus
ENSCAFG00000008060	-	94	84.416	ENSMOCG00000020148	Thumpd3	76	84.416	Microtus_ochrogaster
ENSCAFG00000008060	-	93	58.268	ENSMMOG00000021791	thumpd3	76	56.364	Mola_mola
ENSCAFG00000008060	-	59	30.894	ENSMMOG00000007356	thumpd2	55	30.894	Mola_mola
ENSCAFG00000008060	-	94	75.696	ENSMODG00000004715	-	81	74.870	Monodelphis_domestica
ENSCAFG00000008060	-	93	58.377	ENSMALG00000017316	thumpd3	77	57.853	Monopterus_albus
ENSCAFG00000008060	-	94	85.195	ENSMUSG00000030264	Thumpd3	76	85.195	Mus_musculus
ENSCAFG00000008060	-	94	85.195	MGP_PahariEiJ_G0022465	Thumpd3	77	85.195	Mus_pahari
ENSCAFG00000008060	-	94	85.455	MGP_SPRETEiJ_G0029742	Thumpd3	76	85.455	Mus_spretus
ENSCAFG00000008060	-	94	82.857	ENSMPUG00000005219	-	75	82.597	Mustela_putorius_furo
ENSCAFG00000008060	-	94	92.468	ENSMPUG00000017066	-	76	92.468	Mustela_putorius_furo
ENSCAFG00000008060	-	94	88.312	ENSMLUG00000008538	THUMPD3	75	88.312	Myotis_lucifugus
ENSCAFG00000008060	-	91	72.000	ENSNGAG00000001549	-	76	71.200	Nannospalax_galili
ENSCAFG00000008060	-	94	88.052	ENSNGAG00000021014	-	77	88.052	Nannospalax_galili
ENSCAFG00000008060	-	93	59.318	ENSNBRG00000004886	thumpd3	73	58.225	Neolamprologus_brichardi
ENSCAFG00000008060	-	94	87.013	ENSNLEG00000003863	THUMPD3	77	87.013	Nomascus_leucogenys
ENSCAFG00000008060	-	92	74.935	ENSMEUG00000009819	THUMPD3	90	74.935	Notamacropus_eugenii
ENSCAFG00000008060	-	92	84.474	ENSOPRG00000002020	THUMPD3	90	84.474	Ochotona_princeps
ENSCAFG00000008060	-	86	85.634	ENSODEG00000018242	THUMPD3	100	85.634	Octodon_degus
ENSCAFG00000008060	-	93	58.793	ENSONIG00000018977	thumpd3	73	57.480	Oreochromis_niloticus
ENSCAFG00000008060	-	62	31.890	ENSONIG00000001165	thumpd2	52	32.759	Oreochromis_niloticus
ENSCAFG00000008060	-	92	66.667	ENSOANG00000014481	THUMPD3	90	66.667	Ornithorhynchus_anatinus
ENSCAFG00000008060	-	96	84.596	ENSOCUG00000010921	THUMPD3	83	84.596	Oryctolagus_cuniculus
ENSCAFG00000008060	-	93	59.845	ENSORLG00000000676	thumpd3	75	58.808	Oryzias_latipes
ENSCAFG00000008060	-	57	34.615	ENSORLG00020018792	thumpd2	52	35.043	Oryzias_latipes_hni
ENSCAFG00000008060	-	93	60.363	ENSORLG00020007509	thumpd3	75	59.326	Oryzias_latipes_hni
ENSCAFG00000008060	-	93	60.363	ENSORLG00015003615	thumpd3	75	59.326	Oryzias_latipes_hsok
ENSCAFG00000008060	-	96	57.722	ENSOMEG00000014115	thumpd3	75	56.962	Oryzias_melastigma
ENSCAFG00000008060	-	93	86.877	ENSOGAG00000017111	THUMPD3	92	86.877	Otolemur_garnettii
ENSCAFG00000008060	-	93	88.251	ENSOARG00000007139	THUMPD3	74	88.251	Ovis_aries
ENSCAFG00000008060	-	94	87.273	ENSPPAG00000025852	THUMPD3	76	87.273	Pan_paniscus
ENSCAFG00000008060	-	94	93.247	ENSPPRG00000008071	THUMPD3	76	93.247	Panthera_pardus
ENSCAFG00000008060	-	94	92.727	ENSPTIG00000017923	THUMPD3	76	92.727	Panthera_tigris_altaica
ENSCAFG00000008060	-	94	87.013	ENSPTRG00000014585	THUMPD3	76	87.013	Pan_troglodytes
ENSCAFG00000008060	-	94	85.714	ENSPANG00000016253	THUMPD3	76	85.714	Papio_anubis
ENSCAFG00000008060	-	93	64.416	ENSPKIG00000014009	thumpd3	76	64.416	Paramormyrops_kingsleyae
ENSCAFG00000008060	-	94	69.674	ENSPSIG00000007370	THUMPD3	78	69.674	Pelodiscus_sinensis
ENSCAFG00000008060	-	96	59.194	ENSPMGG00000017563	thumpd3	77	58.438	Periophthalmus_magnuspinnatus
ENSCAFG00000008060	-	94	83.377	ENSPEMG00000022411	Thumpd3	76	83.377	Peromyscus_maniculatus_bairdii
ENSCAFG00000008060	-	93	52.405	ENSPMAG00000001291	thumpd3	85	51.250	Petromyzon_marinus
ENSCAFG00000008060	-	94	74.687	ENSPCIG00000002049	THUMPD3	77	74.687	Phascolarctos_cinereus
ENSCAFG00000008060	-	93	59.530	ENSPFOG00000002318	thumpd3	73	59.530	Poecilia_formosa
ENSCAFG00000008060	-	93	59.530	ENSPLAG00000014804	thumpd3	73	59.530	Poecilia_latipinna
ENSCAFG00000008060	-	56	31.034	ENSPMEG00000009573	-	50	31.897	Poecilia_mexicana
ENSCAFG00000008060	-	93	59.530	ENSPMEG00000000582	thumpd3	73	59.530	Poecilia_mexicana
ENSCAFG00000008060	-	93	58.656	ENSPREG00000009176	thumpd3	73	57.474	Poecilia_reticulata
ENSCAFG00000008060	-	54	32.432	ENSPREG00000001603	THUMPD2	52	32.328	Poecilia_reticulata
ENSCAFG00000008060	-	90	66.307	ENSPPYG00000017616	-	74	65.499	Pongo_abelii
ENSCAFG00000008060	-	94	87.013	ENSPPYG00000029461	THUMPD3	77	87.013	Pongo_abelii
ENSCAFG00000008060	-	54	33.482	ENSPPYG00000012470	THUMPD2	50	33.482	Pongo_abelii
ENSCAFG00000008060	-	92	89.211	ENSPCAG00000015398	THUMPD3	90	89.211	Procavia_capensis
ENSCAFG00000008060	-	87	82.451	ENSPCOG00000023618	-	82	82.451	Propithecus_coquereli
ENSCAFG00000008060	-	94	77.143	ENSPCOG00000018095	-	75	78.961	Propithecus_coquereli
ENSCAFG00000008060	-	94	89.610	ENSPVAG00000008721	THUMPD3	76	89.610	Pteropus_vampyrus
ENSCAFG00000008060	-	93	59.055	ENSPNYG00000006918	thumpd3	73	58.225	Pundamilia_nyererei
ENSCAFG00000008060	-	93	57.292	ENSPNAG00000014936	thumpd3	76	57.031	Pygocentrus_nattereri
ENSCAFG00000008060	-	94	82.078	ENSRNOG00000006941	Thumpd3	76	82.078	Rattus_norvegicus
ENSCAFG00000008060	-	94	86.234	ENSRBIG00000035954	THUMPD3	77	86.234	Rhinopithecus_bieti
ENSCAFG00000008060	-	94	85.974	ENSRROG00000035734	THUMPD3	77	85.974	Rhinopithecus_roxellana
ENSCAFG00000008060	-	94	85.455	ENSSBOG00000023567	THUMPD3	79	85.455	Saimiri_boliviensis_boliviensis
ENSCAFG00000008060	-	63	30.116	ENSSHAG00000010785	THUMPD2	51	30.116	Sarcophilus_harrisii
ENSCAFG00000008060	-	94	74.873	ENSSHAG00000014467	THUMPD3	77	74.873	Sarcophilus_harrisii
ENSCAFG00000008060	-	96	59.950	ENSSFOG00015019210	thumpd3	78	59.950	Scleropages_formosus
ENSCAFG00000008060	-	93	59.221	ENSSMAG00000000609	thumpd3	76	58.442	Scophthalmus_maximus
ENSCAFG00000008060	-	93	59.536	ENSSDUG00000012179	thumpd3	76	59.536	Seriola_dumerili
ENSCAFG00000008060	-	93	59.640	ENSSLDG00000022028	thumpd3	74	59.640	Seriola_lalandi_dorsalis
ENSCAFG00000008060	-	77	87.500	ENSSARG00000002239	THUMPD3	63	87.500	Sorex_araneus
ENSCAFG00000008060	-	93	69.424	ENSSPUG00000017461	THUMPD3	78	69.424	Sphenodon_punctatus
ENSCAFG00000008060	-	93	58.377	ENSSPAG00000008345	thumpd3	72	57.292	Stegastes_partitus
ENSCAFG00000008060	-	94	89.351	ENSSSCG00000011542	THUMPD3	77	89.351	Sus_scrofa
ENSCAFG00000008060	-	93	67.436	ENSTGUG00000010440	THUMPD3	86	67.436	Taeniopygia_guttata
ENSCAFG00000008060	-	86	58.757	ENSTRUG00000004420	thumpd3	78	58.757	Takifugu_rubripes
ENSCAFG00000008060	-	93	60.630	ENSTNIG00000014627	thumpd3	78	60.630	Tetraodon_nigroviridis
ENSCAFG00000008060	-	86	90.678	ENSTBEG00000003450	THUMPD3	69	90.678	Tupaia_belangeri
ENSCAFG00000008060	-	94	89.870	ENSTTRG00000009694	THUMPD3	76	89.870	Tursiops_truncatus
ENSCAFG00000008060	-	94	93.506	ENSUAMG00000009412	THUMPD3	77	93.506	Ursus_americanus
ENSCAFG00000008060	-	94	88.052	ENSUMAG00000019241	THUMPD3	75	88.052	Ursus_maritimus
ENSCAFG00000008060	-	82	91.691	ENSVPAG00000002855	THUMPD3	81	91.691	Vicugna_pacos
ENSCAFG00000008060	-	94	97.922	ENSVVUG00000025278	THUMPD3	77	97.922	Vulpes_vulpes
ENSCAFG00000008060	-	93	58.897	ENSXETG00000001447	thumpd3	76	57.576	Xenopus_tropicalis
ENSCAFG00000008060	-	93	60.052	ENSXCOG00000000159	thumpd3	77	60.052	Xiphophorus_couchianus
ENSCAFG00000008060	-	93	60.313	ENSXMAG00000001423	thumpd3	73	60.313	Xiphophorus_maculatus