EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000008167 (Gene tree)
Gene ID: 486257
Gene Symbol: SETD1B
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 20814 bases
Position: chr26:7446267-7467080
Accession: 46053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000041822	RRM_1	PF00076.22	1.7e-10	1	1
ENSCAFP00000012026	RRM_1	PF00076.22	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000042803	-	5766	-	ENSCAFP00000041822	1921 (aa)	-	J9NSX0
ENSCAFT00000012996	-	5922	XM_005636179	ENSCAFP00000012026	1973 (aa)	XP_005636236	E2R0Z5

Gene Model

Click here to download ENSCAFG00000008167's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000008167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000008167	SETD1B	71	61.878	ENSAPLG00000005217	SETD1B	69	76.071	Anas_platyrhynchos
ENSCAFG00000008167	SETD1B	99	94.442	ENSCAFG00020016619	SETD1B	99	94.442	Canis_lupus_dingo
ENSCAFG00000008167	SETD1B	90	89.932	ENSCHIG00000013406	SETD1B	85	90.294	Capra_hircus
ENSCAFG00000008167	SETD1B	85	94.828	ENSTSYG00000033777	SETD1B	68	97.087	Carlito_syrichta
ENSCAFG00000008167	SETD1B	95	93.182	ENSCATG00000035803	SETD1B	63	93.030	Cercocebus_atys
ENSCAFG00000008167	SETD1B	89	83.701	ENSCSAG00000002187	SETD1B	73	85.876	Chlorocebus_sabaeus
ENSCAFG00000008167	SETD1B	88	91.121	ENSCANG00000023445	SETD1B	88	90.882	Colobus_angolensis_palliatus
ENSCAFG00000008167	SETD1B	64	97.260	ENSCGRG00000018075	Setd1b	85	96.804	Cricetulus_griseus_crigri
ENSCAFG00000008167	SETD1B	96	94.690	ENSEASG00005012369	SETD1B	70	97.015	Equus_asinus_asinus
ENSCAFG00000008167	SETD1B	96	94.985	ENSECAG00000006549	SETD1B	64	94.985	Equus_caballus
ENSCAFG00000008167	SETD1B	84	92.167	ENSFDAG00000015120	SETD1B	97	93.421	Fukomys_damarensis
ENSCAFG00000008167	SETD1B	66	62.969	ENSGALG00000004324	SETD1B	53	75.000	Gallus_gallus
ENSCAFG00000008167	SETD1B	86	56.693	ENSGAFG00000008712	setd1ba	57	79.042	Gambusia_affinis
ENSCAFG00000008167	SETD1B	66	73.995	ENSGACG00000017002	setd1ba	51	75.275	Gasterosteus_aculeatus
ENSCAFG00000008167	SETD1B	71	94.984	ENSLAFG00000026518	SETD1B	74	94.984	Loxodonta_africana
ENSCAFG00000008167	SETD1B	64	81.940	ENSMFAG00000030930	SETD1B	66	83.686	Macaca_fascicularis
ENSCAFG00000008167	SETD1B	100	84.577	ENSMNEG00000014228	SETD1B	66	83.837	Macaca_nemestrina
ENSCAFG00000008167	SETD1B	74	92.035	ENSODEG00000010155	SETD1B	65	93.543	Octodon_degus
ENSCAFG00000008167	SETD1B	81	96.399	ENSPPRG00000021041	SETD1B	90	96.438	Panthera_pardus
ENSCAFG00000008167	SETD1B	76	73.370	ENSPMGG00000011527	setd1ba	58	73.497	Periophthalmus_magnuspinnatus
ENSCAFG00000008167	SETD1B	87	57.278	ENSPREG00000011589	setd1ba	53	80.547	Poecilia_reticulata
ENSCAFG00000008167	SETD1B	62	82.598	ENSRROG00000011844	SETD1B	67	94.690	Rhinopithecus_roxellana
ENSCAFG00000008167	SETD1B	78	96.100	ENSSSCG00000009806	SETD1B	87	96.100	Sus_scrofa
ENSCAFG00000008167	SETD1B	70	61.853	ENSTGUG00000006093	-	54	75.652	Taeniopygia_guttata
ENSCAFG00000008167	SETD1B	91	94.118	ENSUAMG00000008729	SETD1B	72	95.269	Ursus_americanus
ENSCAFG00000008167	SETD1B	86	56.740	ENSXCOG00000004451	setd1ba	53	78.571	Xiphophorus_couchianus
ENSCAFG00000008167	SETD1B	86	57.006	ENSXMAG00000014097	setd1ba	54	80.243	Xiphophorus_maculatus