EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000008863 (Gene tree)
Gene ID: 100687160
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 37533 bases
Position: chr31:26545637-26583169
Accession: 53039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013024	RRM_1	PF00076.22	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014079	-	4937	XM_003433964	ENSCAFP00000013024	1126 (aa)	-	F1Q448

Gene Model

Click here to download ENSCAFG00000008863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000008863's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000008863	SCAF4	99	94.732	ENSG00000156304	SCAF4	99	94.732	Homo_sapiens
ENSCAFG00000008863	SCAF4	75	97.183	ENSAMEG00000014987	SCAF4	100	97.183	Ailuropoda_melanoleuca
ENSCAFG00000008863	SCAF4	100	76.383	ENSAPLG00000002509	SCAF4	59	83.696	Anas_platyrhynchos
ENSCAFG00000008863	SCAF4	99	64.677	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSCAFG00000008863	SCAF4	99	92.888	ENSANAG00000037494	SCAF4	99	92.976	Aotus_nancymaae
ENSCAFG00000008863	SCAF4	93	49.954	ENSAMXG00000008585	scaf4a	59	62.154	Astyanax_mexicanus
ENSCAFG00000008863	SCAF4	100	94.097	ENSBTAG00000018855	SCAF4	100	94.361	Bos_taurus
ENSCAFG00000008863	SCAF4	100	93.958	ENSCJAG00000008993	SCAF4	99	95.152	Callithrix_jacchus
ENSCAFG00000008863	SCAF4	100	97.602	ENSCAFG00020026019	SCAF4	100	100.000	Canis_lupus_dingo
ENSCAFG00000008863	SCAF4	99	93.568	ENSCHIG00000008385	SCAF4	99	93.744	Capra_hircus
ENSCAFG00000008863	SCAF4	92	94.869	ENSTSYG00000011344	SCAF4	98	94.890	Carlito_syrichta
ENSCAFG00000008863	SCAF4	99	89.789	ENSCPOG00000012443	SCAF4	99	89.877	Cavia_porcellus
ENSCAFG00000008863	SCAF4	99	94.459	ENSCCAG00000033727	SCAF4	99	94.459	Cebus_capucinus
ENSCAFG00000008863	SCAF4	99	93.176	ENSCATG00000030379	SCAF4	100	93.322	Cercocebus_atys
ENSCAFG00000008863	SCAF4	99	90.443	ENSCLAG00000006298	SCAF4	100	90.009	Chinchilla_lanigera
ENSCAFG00000008863	SCAF4	99	92.820	ENSCSAG00000009438	SCAF4	99	92.820	Chlorocebus_sabaeus
ENSCAFG00000008863	SCAF4	99	93.755	ENSCANG00000029847	SCAF4	99	93.931	Colobus_angolensis_palliatus
ENSCAFG00000008863	SCAF4	68	90.130	ENSCGRG00001020821	Scaf4	65	90.260	Cricetulus_griseus_chok1gshd
ENSCAFG00000008863	SCAF4	68	89.290	ENSCGRG00000014360	Scaf4	100	81.765	Cricetulus_griseus_crigri
ENSCAFG00000008863	SCAF4	79	51.832	ENSCSEG00000019549	scaf4a	52	54.884	Cynoglossus_semilaevis
ENSCAFG00000008863	SCAF4	89	50.145	ENSDARG00000077093	scaf4a	56	60.498	Danio_rerio
ENSCAFG00000008863	SCAF4	99	91.158	ENSDNOG00000019014	SCAF4	94	91.335	Dasypus_novemcinctus
ENSCAFG00000008863	SCAF4	96	80.935	ENSETEG00000000583	SCAF4	99	80.843	Echinops_telfairi
ENSCAFG00000008863	SCAF4	99	97.613	ENSEASG00005007756	SCAF4	99	97.613	Equus_asinus_asinus
ENSCAFG00000008863	SCAF4	99	97.438	ENSECAG00000014248	SCAF4	99	97.438	Equus_caballus
ENSCAFG00000008863	SCAF4	59	52.083	ENSELUG00000002779	SCAF8	67	68.841	Esox_lucius
ENSCAFG00000008863	SCAF4	99	97.443	ENSFCAG00000002228	SCAF4	99	97.443	Felis_catus
ENSCAFG00000008863	SCAF4	99	89.369	ENSFDAG00000017780	SCAF4	100	89.542	Fukomys_damarensis
ENSCAFG00000008863	SCAF4	100	77.337	ENSGALG00000033965	SCAF4	58	83.359	Gallus_gallus
ENSCAFG00000008863	SCAF4	91	90.516	ENSGGOG00000015557	SCAF4	99	93.818	Gorilla_gorilla
ENSCAFG00000008863	SCAF4	99	91.434	ENSHGLG00000010582	SCAF4	99	91.783	Heterocephalus_glaber_female
ENSCAFG00000008863	SCAF4	99	91.484	ENSHGLG00100009441	SCAF4	100	91.835	Heterocephalus_glaber_male
ENSCAFG00000008863	SCAF4	99	87.014	ENSSTOG00000004450	SCAF4	100	87.279	Ictidomys_tridecemlineatus
ENSCAFG00000008863	SCAF4	99	89.655	ENSJJAG00000019447	Scaf4	99	89.455	Jaculus_jaculus
ENSCAFG00000008863	SCAF4	97	61.871	ENSLACG00000013913	SCAF4	59	66.667	Latimeria_chalumnae
ENSCAFG00000008863	SCAF4	95	57.918	ENSLOCG00000009162	scaf4a	58	66.767	Lepisosteus_oculatus
ENSCAFG00000008863	SCAF4	100	93.634	ENSLAFG00000010710	SCAF4	99	93.899	Loxodonta_africana
ENSCAFG00000008863	SCAF4	99	92.845	ENSMFAG00000037668	SCAF4	99	92.757	Macaca_fascicularis
ENSCAFG00000008863	SCAF4	100	92.677	ENSMMUG00000001712	SCAF4	99	92.751	Macaca_mulatta
ENSCAFG00000008863	SCAF4	99	92.764	ENSMNEG00000032966	SCAF4	99	92.502	Macaca_nemestrina
ENSCAFG00000008863	SCAF4	99	93.001	ENSMLEG00000039674	SCAF4	100	93.351	Mandrillus_leucophaeus
ENSCAFG00000008863	SCAF4	99	77.072	ENSMGAG00000014515	SCAF4	59	83.670	Meleagris_gallopavo
ENSCAFG00000008863	SCAF4	99	87.996	ENSMAUG00000013307	Scaf4	100	88.731	Mesocricetus_auratus
ENSCAFG00000008863	SCAF4	99	95.062	ENSMICG00000005256	SCAF4	99	95.062	Microcebus_murinus
ENSCAFG00000008863	SCAF4	98	91.523	ENSMOCG00000012087	Scaf4	95	92.057	Microtus_ochrogaster
ENSCAFG00000008863	SCAF4	99	85.740	ENSMODG00000021040	SCAF4	99	85.208	Monodelphis_domestica
ENSCAFG00000008863	SCAF4	99	89.345	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.345	Mus_caroli
ENSCAFG00000008863	SCAF4	99	89.032	ENSMUSG00000022983	Scaf4	95	89.419	Mus_musculus
ENSCAFG00000008863	SCAF4	98	88.220	MGP_PahariEiJ_G0016649	Scaf4	96	87.277	Mus_pahari
ENSCAFG00000008863	SCAF4	99	83.361	MGP_SPRETEiJ_G0021850	Scaf4	99	85.337	Mus_spretus
ENSCAFG00000008863	SCAF4	99	96.066	ENSMPUG00000001078	SCAF4	99	96.066	Mustela_putorius_furo
ENSCAFG00000008863	SCAF4	99	79.424	ENSMLUG00000011472	SCAF4	78	85.385	Myotis_lucifugus
ENSCAFG00000008863	SCAF4	99	90.035	ENSNGAG00000005214	Scaf4	99	90.885	Nannospalax_galili
ENSCAFG00000008863	SCAF4	99	94.381	ENSNLEG00000003569	SCAF4	99	94.381	Nomascus_leucogenys
ENSCAFG00000008863	SCAF4	79	90.217	ENSOPRG00000007016	SCAF4	77	89.674	Ochotona_princeps
ENSCAFG00000008863	SCAF4	99	89.455	ENSODEG00000002718	SCAF4	99	89.369	Octodon_degus
ENSCAFG00000008863	SCAF4	99	88.220	ENSOCUG00000008336	SCAF4	99	88.307	Oryctolagus_cuniculus
ENSCAFG00000008863	SCAF4	70	95.954	ENSOGAG00000014653	SCAF4	93	95.954	Otolemur_garnettii
ENSCAFG00000008863	SCAF4	99	93.210	ENSOARG00000013894	SCAF4	98	93.327	Ovis_aries
ENSCAFG00000008863	SCAF4	99	94.732	ENSPPAG00000028535	SCAF4	99	94.732	Pan_paniscus
ENSCAFG00000008863	SCAF4	99	97.701	ENSPPRG00000000635	SCAF4	100	97.701	Panthera_pardus
ENSCAFG00000008863	SCAF4	99	94.583	ENSPTIG00000021578	SCAF4	99	94.583	Panthera_tigris_altaica
ENSCAFG00000008863	SCAF4	99	94.732	ENSPTRG00000013848	SCAF4	99	94.732	Pan_troglodytes
ENSCAFG00000008863	SCAF4	99	93.091	ENSPANG00000017332	SCAF4	99	93.194	Papio_anubis
ENSCAFG00000008863	SCAF4	64	63.003	ENSPKIG00000022408	scaf4a	89	65.753	Paramormyrops_kingsleyae
ENSCAFG00000008863	SCAF4	100	77.827	ENSPSIG00000014242	SCAF4	57	84.472	Pelodiscus_sinensis
ENSCAFG00000008863	SCAF4	61	87.879	ENSPCIG00000028183	SCAF4	91	83.378	Phascolarctos_cinereus
ENSCAFG00000008863	SCAF4	53	55.515	ENSPREG00000013510	scaf4b	57	66.837	Poecilia_reticulata
ENSCAFG00000008863	SCAF4	99	94.537	ENSPPYG00000011355	SCAF4	100	94.537	Pongo_abelii
ENSCAFG00000008863	SCAF4	99	83.495	ENSPCAG00000009998	SCAF4	99	81.377	Procavia_capensis
ENSCAFG00000008863	SCAF4	99	94.396	ENSPCOG00000018710	SCAF4	99	94.396	Propithecus_coquereli
ENSCAFG00000008863	SCAF4	99	96.454	ENSPVAG00000005220	SCAF4	99	96.454	Pteropus_vampyrus
ENSCAFG00000008863	SCAF4	76	57.679	ENSPNAG00000016892	scaf4a	59	63.678	Pygocentrus_nattereri
ENSCAFG00000008863	SCAF4	98	84.932	ENSRNOG00000002104	Scaf4	94	83.684	Rattus_norvegicus
ENSCAFG00000008863	SCAF4	99	92.049	ENSRBIG00000040007	SCAF4	61	94.368	Rhinopithecus_bieti
ENSCAFG00000008863	SCAF4	99	94.102	ENSRROG00000029488	SCAF4	99	94.190	Rhinopithecus_roxellana
ENSCAFG00000008863	SCAF4	99	85.803	ENSSHAG00000001581	SCAF4	99	85.004	Sarcophilus_harrisii
ENSCAFG00000008863	SCAF4	88	47.947	ENSSFOG00015006338	scaf4a	54	58.442	Scleropages_formosus
ENSCAFG00000008863	SCAF4	66	59.551	ENSSMAG00000003738	scaf4b	53	72.152	Scophthalmus_maximus
ENSCAFG00000008863	SCAF4	80	52.802	ENSSMAG00000017901	scaf4a	52	52.711	Scophthalmus_maximus
ENSCAFG00000008863	SCAF4	57	61.255	ENSSDUG00000012380	scaf4b	53	70.886	Seriola_dumerili
ENSCAFG00000008863	SCAF4	99	89.658	ENSSARG00000009994	SCAF4	99	90.009	Sorex_araneus
ENSCAFG00000008863	SCAF4	99	91.725	ENSSSCG00000021023	SCAF4	99	91.463	Sus_scrofa
ENSCAFG00000008863	SCAF4	75	72.108	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSCAFG00000008863	SCAF4	50	58.271	ENSTRUG00000009536	-	64	58.065	Takifugu_rubripes
ENSCAFG00000008863	SCAF4	99	95.652	ENSTTRG00000010963	SCAF4	100	95.652	Tursiops_truncatus
ENSCAFG00000008863	SCAF4	99	96.536	ENSUAMG00000008860	SCAF4	99	96.536	Ursus_americanus
ENSCAFG00000008863	SCAF4	99	95.629	ENSUMAG00000016962	SCAF4	100	95.629	Ursus_maritimus
ENSCAFG00000008863	SCAF4	99	100.000	ENSVVUG00000002953	SCAF4	100	100.000	Vulpes_vulpes
ENSCAFG00000008863	SCAF4	99	55.970	ENSXETG00000007351	scaf4	62	65.702	Xenopus_tropicalis