EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000008892 (Gene tree)
Gene ID: 487735
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis 1 homolog
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 70582 bases
Position: chr31:27087570-27158151
Accession: 53050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013055	Npa1	PF11707.8	2.6e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014113	-	7194	XM_005638831	ENSCAFP00000013055	2277 (aa)	XP_005638888	F1Q419

Gene Model

Click here to download ENSCAFG00000008892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000008892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000008892	URB1	99	82.555	ENSG00000142207	URB1	100	82.405	Homo_sapiens
ENSCAFG00000008892	URB1	99	42.293	ENSAPOG00000020308	urb1	99	42.336	Acanthochromis_polyacanthus
ENSCAFG00000008892	URB1	100	88.757	ENSAMEG00000011998	URB1	99	88.757	Ailuropoda_melanoleuca
ENSCAFG00000008892	URB1	96	43.957	ENSACIG00000003248	urb1	98	43.957	Amphilophus_citrinellus
ENSCAFG00000008892	URB1	99	40.494	ENSAOCG00000010364	urb1	99	40.537	Amphiprion_ocellaris
ENSCAFG00000008892	URB1	97	52.192	ENSAPEG00000010758	urb1	99	52.192	Amphiprion_percula
ENSCAFG00000008892	URB1	99	43.064	ENSATEG00000011790	urb1	99	43.064	Anabas_testudineus
ENSCAFG00000008892	URB1	97	57.201	ENSAPLG00000012791	URB1	100	57.291	Anas_platyrhynchos
ENSCAFG00000008892	URB1	99	53.284	ENSACAG00000002817	URB1	99	53.328	Anolis_carolinensis
ENSCAFG00000008892	URB1	100	81.527	ENSANAG00000024617	URB1	100	81.527	Aotus_nancymaae
ENSCAFG00000008892	URB1	99	43.997	ENSACLG00000024865	urb1	99	43.891	Astatotilapia_calliptera
ENSCAFG00000008892	URB1	99	39.267	ENSAMXG00000012306	urb1	99	39.180	Astyanax_mexicanus
ENSCAFG00000008892	URB1	99	80.359	ENSBTAG00000012412	URB1	99	80.359	Bos_taurus
ENSCAFG00000008892	URB1	100	81.069	ENSCJAG00000009118	URB1	100	81.069	Callithrix_jacchus
ENSCAFG00000008892	URB1	100	98.726	ENSCAFG00020025987	-	100	98.726	Canis_lupus_dingo
ENSCAFG00000008892	URB1	100	97.628	ENSCAFG00020025994	-	100	97.628	Canis_lupus_dingo
ENSCAFG00000008892	URB1	99	80.227	ENSCHIG00000015645	URB1	99	80.227	Capra_hircus
ENSCAFG00000008892	URB1	100	81.519	ENSTSYG00000013286	URB1	99	81.563	Carlito_syrichta
ENSCAFG00000008892	URB1	98	75.874	ENSCAPG00000015589	URB1	99	75.874	Cavia_aperea
ENSCAFG00000008892	URB1	99	77.007	ENSCPOG00000006748	URB1	99	77.007	Cavia_porcellus
ENSCAFG00000008892	URB1	100	82.002	ENSCCAG00000021299	URB1	100	82.046	Cebus_capucinus
ENSCAFG00000008892	URB1	100	82.097	ENSCATG00000042630	URB1	100	82.097	Cercocebus_atys
ENSCAFG00000008892	URB1	100	77.870	ENSCLAG00000005262	URB1	100	77.870	Chinchilla_lanigera
ENSCAFG00000008892	URB1	100	80.253	ENSCSAG00000009584	URB1	100	80.253	Chlorocebus_sabaeus
ENSCAFG00000008892	URB1	99	59.565	ENSCPBG00000006454	URB1	99	59.565	Chrysemys_picta_bellii
ENSCAFG00000008892	URB1	100	81.834	ENSCANG00000031088	URB1	100	81.834	Colobus_angolensis_palliatus
ENSCAFG00000008892	URB1	99	75.156	ENSCGRG00001010616	Urb1	99	75.055	Cricetulus_griseus_chok1gshd
ENSCAFG00000008892	URB1	98	74.787	ENSCGRG00000015840	Urb1	99	74.854	Cricetulus_griseus_crigri
ENSCAFG00000008892	URB1	99	41.892	ENSCSEG00000012616	urb1	99	41.935	Cynoglossus_semilaevis
ENSCAFG00000008892	URB1	91	55.017	ENSCVAG00000009076	urb1	99	52.371	Cyprinodon_variegatus
ENSCAFG00000008892	URB1	99	42.594	ENSDARG00000060308	urb1	99	42.813	Danio_rerio
ENSCAFG00000008892	URB1	85	79.670	ENSDNOG00000015586	URB1	99	79.670	Dasypus_novemcinctus
ENSCAFG00000008892	URB1	100	78.192	ENSDORG00000006735	Urb1	100	78.192	Dipodomys_ordii
ENSCAFG00000008892	URB1	92	80.545	ENSETEG00000009080	URB1	92	80.545	Echinops_telfairi
ENSCAFG00000008892	URB1	100	84.058	ENSEASG00005007711	URB1	100	84.058	Equus_asinus_asinus
ENSCAFG00000008892	URB1	99	87.948	ENSECAG00000013206	URB1	100	87.948	Equus_caballus
ENSCAFG00000008892	URB1	58	87.083	ENSEEUG00000003626	-	58	87.083	Erinaceus_europaeus
ENSCAFG00000008892	URB1	99	44.163	ENSELUG00000020516	urb1	99	44.522	Esox_lucius
ENSCAFG00000008892	URB1	100	86.573	ENSFCAG00000002177	URB1	100	86.711	Felis_catus
ENSCAFG00000008892	URB1	98	51.849	ENSFALG00000004636	URB1	99	51.717	Ficedula_albicollis
ENSCAFG00000008892	URB1	100	77.462	ENSFDAG00000007288	URB1	95	77.462	Fukomys_damarensis
ENSCAFG00000008892	URB1	99	41.292	ENSFHEG00000000202	urb1	99	41.929	Fundulus_heteroclitus
ENSCAFG00000008892	URB1	92	47.318	ENSGMOG00000001838	urb1	93	47.318	Gadus_morhua
ENSCAFG00000008892	URB1	99	57.443	ENSGALG00000015887	URB1	99	57.443	Gallus_gallus
ENSCAFG00000008892	URB1	94	52.416	ENSGAFG00000020694	urb1	98	52.416	Gambusia_affinis
ENSCAFG00000008892	URB1	99	44.571	ENSGACG00000011703	urb1	99	44.571	Gasterosteus_aculeatus
ENSCAFG00000008892	URB1	99	59.026	ENSGAGG00000022544	URB1	99	59.026	Gopherus_agassizii
ENSCAFG00000008892	URB1	100	82.273	ENSGGOG00000000285	URB1	100	82.273	Gorilla_gorilla
ENSCAFG00000008892	URB1	99	43.837	ENSHBUG00000001904	urb1	99	43.837	Haplochromis_burtoni
ENSCAFG00000008892	URB1	99	76.750	ENSHGLG00000004907	URB1	99	76.750	Heterocephalus_glaber_female
ENSCAFG00000008892	URB1	99	77.277	ENSHGLG00100010749	URB1	99	77.277	Heterocephalus_glaber_male
ENSCAFG00000008892	URB1	69	51.838	ENSHCOG00000018683	urb1	97	52.805	Hippocampus_comes
ENSCAFG00000008892	URB1	99	39.702	ENSIPUG00000014721	urb1	99	39.702	Ictalurus_punctatus
ENSCAFG00000008892	URB1	100	80.018	ENSSTOG00000004539	URB1	100	80.018	Ictidomys_tridecemlineatus
ENSCAFG00000008892	URB1	99	40.788	ENSKMAG00000006001	urb1	99	47.179	Kryptolebias_marmoratus
ENSCAFG00000008892	URB1	97	41.103	ENSLBEG00000027208	urb1	99	51.301	Labrus_bergylta
ENSCAFG00000008892	URB1	99	48.749	ENSLACG00000017059	URB1	100	48.749	Latimeria_chalumnae
ENSCAFG00000008892	URB1	99	45.983	ENSLOCG00000009190	urb1	99	45.983	Lepisosteus_oculatus
ENSCAFG00000008892	URB1	99	78.293	ENSLAFG00000010407	URB1	99	78.293	Loxodonta_africana
ENSCAFG00000008892	URB1	100	82.010	ENSMFAG00000034391	URB1	97	82.010	Macaca_fascicularis
ENSCAFG00000008892	URB1	100	81.703	ENSMMUG00000010295	URB1	100	81.703	Macaca_mulatta
ENSCAFG00000008892	URB1	100	80.526	ENSMNEG00000032981	URB1	100	80.526	Macaca_nemestrina
ENSCAFG00000008892	URB1	100	81.966	ENSMLEG00000041435	URB1	100	81.966	Mandrillus_leucophaeus
ENSCAFG00000008892	URB1	99	42.502	ENSMAMG00000011238	urb1	99	42.459	Mastacembelus_armatus
ENSCAFG00000008892	URB1	99	39.200	ENSMZEG00005011862	urb1	99	39.200	Maylandia_zebra
ENSCAFG00000008892	URB1	98	57.930	ENSMGAG00000014512	URB1	99	57.930	Meleagris_gallopavo
ENSCAFG00000008892	URB1	94	79.708	ENSMAUG00000010516	Urb1	99	80.000	Mesocricetus_auratus
ENSCAFG00000008892	URB1	99	80.465	ENSMICG00000016424	URB1	99	80.465	Microcebus_murinus
ENSCAFG00000008892	URB1	99	73.166	ENSMOCG00000012613	Urb1	99	73.166	Microtus_ochrogaster
ENSCAFG00000008892	URB1	99	64.523	ENSMODG00000021076	URB1	99	64.523	Monodelphis_domestica
ENSCAFG00000008892	URB1	94	51.979	ENSMALG00000017411	urb1	97	52.306	Monopterus_albus
ENSCAFG00000008892	URB1	99	73.804	MGP_CAROLIEiJ_G0020948	Urb1	99	73.804	Mus_caroli
ENSCAFG00000008892	URB1	99	74.111	ENSMUSG00000039929	Urb1	99	74.111	Mus_musculus
ENSCAFG00000008892	URB1	99	74.243	MGP_PahariEiJ_G0016653	Urb1	99	74.243	Mus_pahari
ENSCAFG00000008892	URB1	99	73.936	MGP_SPRETEiJ_G0021854	Urb1	99	73.936	Mus_spretus
ENSCAFG00000008892	URB1	100	86.517	ENSMPUG00000001123	URB1	100	86.517	Mustela_putorius_furo
ENSCAFG00000008892	URB1	99	75.175	ENSNGAG00000001905	Urb1	99	75.175	Nannospalax_galili
ENSCAFG00000008892	URB1	82	44.483	ENSNBRG00000001049	urb1	99	44.483	Neolamprologus_brichardi
ENSCAFG00000008892	URB1	99	80.396	ENSNLEG00000026872	URB1	100	80.298	Nomascus_leucogenys
ENSCAFG00000008892	URB1	96	58.711	ENSMEUG00000010828	URB1	96	58.839	Notamacropus_eugenii
ENSCAFG00000008892	URB1	99	73.030	ENSOPRG00000013482	URB1	99	73.030	Ochotona_princeps
ENSCAFG00000008892	URB1	100	76.556	ENSODEG00000002587	URB1	99	76.556	Octodon_degus
ENSCAFG00000008892	URB1	99	44.256	ENSONIG00000005599	urb1	99	44.256	Oreochromis_niloticus
ENSCAFG00000008892	URB1	99	78.612	ENSOCUG00000009381	URB1	99	78.612	Oryctolagus_cuniculus
ENSCAFG00000008892	URB1	99	43.200	ENSORLG00000003429	urb1	99	43.200	Oryzias_latipes
ENSCAFG00000008892	URB1	99	42.994	ENSORLG00020013785	urb1	99	42.994	Oryzias_latipes_hni
ENSCAFG00000008892	URB1	99	41.917	ENSORLG00015019421	urb1	99	48.739	Oryzias_latipes_hsok
ENSCAFG00000008892	URB1	76	51.415	ENSOMEG00000002094	urb1	97	51.415	Oryzias_melastigma
ENSCAFG00000008892	URB1	99	80.676	ENSOGAG00000017140	URB1	100	80.676	Otolemur_garnettii
ENSCAFG00000008892	URB1	97	80.220	ENSOARG00000013679	URB1	99	80.135	Ovis_aries
ENSCAFG00000008892	URB1	100	82.624	ENSPPAG00000003423	URB1	100	82.624	Pan_paniscus
ENSCAFG00000008892	URB1	100	87.000	ENSPPRG00000023131	URB1	100	87.000	Panthera_pardus
ENSCAFG00000008892	URB1	92	85.251	ENSPTIG00000016125	URB1	98	85.251	Panthera_tigris_altaica
ENSCAFG00000008892	URB1	100	82.492	ENSPTRG00000013852	URB1	100	82.492	Pan_troglodytes
ENSCAFG00000008892	URB1	100	82.097	ENSPANG00000021964	URB1	100	82.097	Papio_anubis
ENSCAFG00000008892	URB1	97	46.301	ENSPKIG00000003683	urb1	96	46.390	Paramormyrops_kingsleyae
ENSCAFG00000008892	URB1	100	74.584	ENSPEMG00000021205	Urb1	99	74.584	Peromyscus_maniculatus_bairdii
ENSCAFG00000008892	URB1	80	33.757	ENSPMAG00000009733	URB1	99	34.370	Petromyzon_marinus
ENSCAFG00000008892	URB1	99	64.786	ENSPCIG00000016350	URB1	99	65.151	Phascolarctos_cinereus
ENSCAFG00000008892	URB1	96	42.857	ENSPLAG00000004371	urb1	99	42.857	Poecilia_latipinna
ENSCAFG00000008892	URB1	99	43.349	ENSPMEG00000006634	urb1	99	43.349	Poecilia_mexicana
ENSCAFG00000008892	URB1	99	44.037	ENSPREG00000013453	urb1	98	44.037	Poecilia_reticulata
ENSCAFG00000008892	URB1	99	82.026	ENSPPYG00000011359	URB1	100	81.878	Pongo_abelii
ENSCAFG00000008892	URB1	99	67.738	ENSPCAG00000007430	URB1	99	67.738	Procavia_capensis
ENSCAFG00000008892	URB1	100	81.694	ENSPCOG00000022695	URB1	100	81.782	Propithecus_coquereli
ENSCAFG00000008892	URB1	100	81.730	ENSPVAG00000000889	URB1	100	81.730	Pteropus_vampyrus
ENSCAFG00000008892	URB1	99	43.019	ENSPNYG00000010589	urb1	99	43.019	Pundamilia_nyererei
ENSCAFG00000008892	URB1	99	40.202	ENSPNAG00000019324	urb1	99	40.158	Pygocentrus_nattereri
ENSCAFG00000008892	URB1	99	73.904	ENSRNOG00000002080	Urb1	99	74.035	Rattus_norvegicus
ENSCAFG00000008892	URB1	100	81.255	ENSRBIG00000033122	URB1	100	81.255	Rhinopithecus_bieti
ENSCAFG00000008892	URB1	100	81.255	ENSRROG00000040237	URB1	100	81.255	Rhinopithecus_roxellana
ENSCAFG00000008892	URB1	100	81.667	ENSSBOG00000027672	URB1	100	81.667	Saimiri_boliviensis_boliviensis
ENSCAFG00000008892	URB1	99	64.479	ENSSHAG00000005140	URB1	100	64.479	Sarcophilus_harrisii
ENSCAFG00000008892	URB1	93	45.945	ENSSFOG00015000339	urb1	99	45.988	Scleropages_formosus
ENSCAFG00000008892	URB1	99	43.446	ENSSMAG00000003782	urb1	99	43.731	Scophthalmus_maximus
ENSCAFG00000008892	URB1	99	44.478	ENSSDUG00000012313	urb1	99	44.478	Seriola_dumerili
ENSCAFG00000008892	URB1	99	44.522	ENSSLDG00000023179	urb1	99	44.522	Seriola_lalandi_dorsalis
ENSCAFG00000008892	URB1	99	55.739	ENSSPUG00000012447	URB1	100	55.715	Sphenodon_punctatus
ENSCAFG00000008892	URB1	99	43.338	ENSSPAG00000006325	urb1	99	43.424	Stegastes_partitus
ENSCAFG00000008892	URB1	100	80.789	ENSSSCG00000032024	URB1	100	80.789	Sus_scrofa
ENSCAFG00000008892	URB1	73	58.343	ENSTGUG00000013442	URB1	100	58.343	Taeniopygia_guttata
ENSCAFG00000008892	URB1	99	43.399	ENSTRUG00000009372	urb1	99	43.218	Takifugu_rubripes
ENSCAFG00000008892	URB1	99	43.201	ENSTNIG00000016277	urb1	99	43.113	Tetraodon_nigroviridis
ENSCAFG00000008892	URB1	81	82.899	ENSTBEG00000010044	URB1	81	82.899	Tupaia_belangeri
ENSCAFG00000008892	URB1	91	82.017	ENSTTRG00000007712	URB1	92	82.017	Tursiops_truncatus
ENSCAFG00000008892	URB1	100	88.669	ENSUAMG00000012231	URB1	99	88.669	Ursus_americanus
ENSCAFG00000008892	URB1	96	87.247	ENSUMAG00000017419	URB1	99	87.247	Ursus_maritimus
ENSCAFG00000008892	URB1	68	91.270	ENSVPAG00000001164	URB1	68	91.270	Vicugna_pacos
ENSCAFG00000008892	URB1	100	97.280	ENSVVUG00000000551	URB1	100	97.280	Vulpes_vulpes
ENSCAFG00000008892	URB1	99	49.979	ENSXETG00000009895	urb1	99	50.064	Xenopus_tropicalis
ENSCAFG00000008892	URB1	99	41.197	ENSXCOG00000005500	urb1	98	45.618	Xiphophorus_couchianus
ENSCAFG00000008892	URB1	99	41.164	ENSXMAG00000007253	urb1	98	45.590	Xiphophorus_maculatus