EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000009006 (Gene tree)
Gene ID: 477128
Gene Symbol: GFM1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 46739 bases
Position: chr23:51939304-51986042
Accession: 41183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013270	GTP_EFTU	PF00009.27	1.2e-63	1	1
ENSCAFP00000042644	GTP_EFTU	PF00009.27	1.3e-47	1	1
ENSCAFP00000013270	GTP_EFTU_D2	PF03144.25	4.7e-18	1	1
ENSCAFP00000042644	GTP_EFTU_D2	PF03144.25	6e-18	1	1
ENSCAFP00000042644	EFG_IV	PF03764.18	4.9e-35	1	1
ENSCAFP00000013270	EFG_IV	PF03764.18	5.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000045997	-	5898	XM_534320	ENSCAFP00000042644	676 (aa)	-	J9PA61
ENSCAFT00000014349	-	2256	-	ENSCAFP00000013270	751 (aa)	-	F1PQD0

Gene Model

Click here to download ENSCAFG00000009006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000009006	GFM1	95	33.333	ENSCAFG00000008298	GFM2	91	34.473
ENSCAFG00000009006	GFM1	75	40.952	ENSCAFG00000019158	EEF2	73	38.926
ENSCAFG00000009006	GFM1	58	34.737	ENSCAFG00000014065	EFTUD2	51	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009006	GFM1	100	93.195	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSCAFG00000009006	GFM1	95	80.435	ENSAPOG00000016489	gfm1	97	80.176	Acanthochromis_polyacanthus
ENSCAFG00000009006	GFM1	100	96.746	ENSAMEG00000013542	GFM1	97	96.429	Ailuropoda_melanoleuca
ENSCAFG00000009006	GFM1	92	81.090	ENSACIG00000014465	gfm1	93	77.051	Amphilophus_citrinellus
ENSCAFG00000009006	GFM1	99	80.775	ENSAOCG00000006023	gfm1	97	79.835	Amphiprion_ocellaris
ENSCAFG00000009006	GFM1	99	80.775	ENSAPEG00000024499	gfm1	98	80.926	Amphiprion_percula
ENSCAFG00000009006	GFM1	100	80.621	ENSATEG00000013789	gfm1	98	79.700	Anabas_testudineus
ENSCAFG00000009006	GFM1	100	83.161	ENSAPLG00000005022	GFM1	100	82.782	Anas_platyrhynchos
ENSCAFG00000009006	GFM1	100	83.876	ENSACAG00000006829	GFM1	97	84.123	Anolis_carolinensis
ENSCAFG00000009006	GFM1	100	93.047	ENSANAG00000035983	GFM1	99	92.027	Aotus_nancymaae
ENSCAFG00000009006	GFM1	100	82.101	ENSACLG00000016586	gfm1	98	80.860	Astatotilapia_calliptera
ENSCAFG00000009006	GFM1	100	81.213	ENSAMXG00000013435	gfm1	96	81.476	Astyanax_mexicanus
ENSCAFG00000009006	GFM1	100	94.822	ENSBTAG00000027795	GFM1	98	93.767	Bos_taurus
ENSCAFG00000009006	GFM1	98	56.090	WBGene00009246	gfm-1	98	56.114	Caenorhabditis_elegans
ENSCAFG00000009006	GFM1	100	93.195	ENSCJAG00000000363	GFM1	99	92.027	Callithrix_jacchus
ENSCAFG00000009006	GFM1	100	100.000	ENSCAFG00020005878	GFM1	99	99.862	Canis_lupus_dingo
ENSCAFG00000009006	GFM1	100	94.970	ENSCHIG00000015220	GFM1	98	93.767	Capra_hircus
ENSCAFG00000009006	GFM1	100	95.562	ENSTSYG00000002013	GFM1	99	94.070	Carlito_syrichta
ENSCAFG00000009006	GFM1	96	83.308	ENSCAPG00000005699	GFM1	98	81.207	Cavia_aperea
ENSCAFG00000009006	GFM1	100	93.639	ENSCPOG00000001194	GFM1	97	92.643	Cavia_porcellus
ENSCAFG00000009006	GFM1	100	92.604	ENSCCAG00000025561	GFM1	99	91.622	Cebus_capucinus
ENSCAFG00000009006	GFM1	100	93.639	ENSCATG00000037622	GFM1	99	92.297	Cercocebus_atys
ENSCAFG00000009006	GFM1	100	92.308	ENSCLAG00000002503	GFM1	97	91.644	Chinchilla_lanigera
ENSCAFG00000009006	GFM1	100	93.787	ENSCSAG00000012162	GFM1	99	92.297	Chlorocebus_sabaeus
ENSCAFG00000009006	GFM1	100	83.728	ENSCHOG00000004867	GFM1	96	84.414	Choloepus_hoffmanni
ENSCAFG00000009006	GFM1	100	84.467	ENSCPBG00000018367	GFM1	96	84.819	Chrysemys_picta_bellii
ENSCAFG00000009006	GFM1	99	59.765	ENSCING00000011960	-	94	59.724	Ciona_intestinalis
ENSCAFG00000009006	GFM1	99	60.030	ENSCSAVG00000008514	-	99	60.194	Ciona_savignyi
ENSCAFG00000009006	GFM1	100	93.935	ENSCANG00000031714	GFM1	99	92.183	Colobus_angolensis_palliatus
ENSCAFG00000009006	GFM1	100	94.970	ENSCGRG00001022095	GFM1	98	93.767	Cricetulus_griseus_chok1gshd
ENSCAFG00000009006	GFM1	100	94.970	ENSCGRG00000012043	GFM1	98	93.767	Cricetulus_griseus_crigri
ENSCAFG00000009006	GFM1	100	76.331	ENSCSEG00000017088	gfm1	98	77.019	Cynoglossus_semilaevis
ENSCAFG00000009006	GFM1	99	82.861	ENSCVAG00000004126	gfm1	99	81.857	Cyprinodon_variegatus
ENSCAFG00000009006	GFM1	100	81.213	ENSDARG00000063624	gfm1	98	80.438	Danio_rerio
ENSCAFG00000009006	GFM1	61	91.443	ENSDNOG00000016385	-	100	91.443	Dasypus_novemcinctus
ENSCAFG00000009006	GFM1	100	91.420	ENSDORG00000014165	Gfm1	98	89.305	Dipodomys_ordii
ENSCAFG00000009006	GFM1	100	66.420	FBgn0263133	mEFG1	95	67.324	Drosophila_melanogaster
ENSCAFG00000009006	GFM1	100	82.891	ENSETEG00000019197	GFM1	98	82.162	Echinops_telfairi
ENSCAFG00000009006	GFM1	99	66.074	ENSEBUG00000012794	gfm1	99	66.074	Eptatretus_burgeri
ENSCAFG00000009006	GFM1	96	69.931	ENSEEUG00000000429	GFM1	99	69.931	Erinaceus_europaeus
ENSCAFG00000009006	GFM1	100	79.142	ENSELUG00000014728	gfm1	98	77.929	Esox_lucius
ENSCAFG00000009006	GFM1	100	97.041	ENSFCAG00000013291	GFM1	98	95.664	Felis_catus
ENSCAFG00000009006	GFM1	100	83.284	ENSFALG00000007619	GFM1	100	83.284	Ficedula_albicollis
ENSCAFG00000009006	GFM1	100	92.456	ENSFDAG00000016559	GFM1	97	91.417	Fukomys_damarensis
ENSCAFG00000009006	GFM1	100	81.657	ENSFHEG00000006091	gfm1	98	80.790	Fundulus_heteroclitus
ENSCAFG00000009006	GFM1	100	78.351	ENSGMOG00000010161	gfm1	99	78.918	Gadus_morhua
ENSCAFG00000009006	GFM1	100	82.692	ENSGALG00000009634	GFM1	97	82.778	Gallus_gallus
ENSCAFG00000009006	GFM1	100	82.101	ENSGAFG00000012527	gfm1	98	81.335	Gambusia_affinis
ENSCAFG00000009006	GFM1	99	80.296	ENSGACG00000009864	gfm1	96	80.474	Gasterosteus_aculeatus
ENSCAFG00000009006	GFM1	100	93.491	ENSGGOG00000003085	GFM1	99	92.183	Gorilla_gorilla
ENSCAFG00000009006	GFM1	100	82.249	ENSHBUG00000002120	gfm1	96	82.591	Haplochromis_burtoni
ENSCAFG00000009006	GFM1	100	92.604	ENSHGLG00000016855	GFM1	97	91.826	Heterocephalus_glaber_female
ENSCAFG00000009006	GFM1	100	92.604	ENSHGLG00100013049	GFM1	97	91.826	Heterocephalus_glaber_male
ENSCAFG00000009006	GFM1	99	80.626	ENSHCOG00000007638	gfm1	97	81.091	Hippocampus_comes
ENSCAFG00000009006	GFM1	100	81.657	ENSIPUG00000005873	gfm1	96	82.033	Ictalurus_punctatus
ENSCAFG00000009006	GFM1	100	93.343	ENSSTOG00000010150	GFM1	98	93.379	Ictidomys_tridecemlineatus
ENSCAFG00000009006	GFM1	100	94.083	ENSJJAG00000016447	Gfm1	98	92.328	Jaculus_jaculus
ENSCAFG00000009006	GFM1	100	80.030	ENSKMAG00000020768	gfm1	98	79.155	Kryptolebias_marmoratus
ENSCAFG00000009006	GFM1	100	80.473	ENSLBEG00000021315	gfm1	100	80.912	Labrus_bergylta
ENSCAFG00000009006	GFM1	100	81.953	ENSLACG00000012295	GFM1	99	81.096	Latimeria_chalumnae
ENSCAFG00000009006	GFM1	94	78.840	ENSLOCG00000003778	gfm1	99	76.217	Lepisosteus_oculatus
ENSCAFG00000009006	GFM1	100	91.124	ENSLAFG00000010945	GFM1	100	89.517	Loxodonta_africana
ENSCAFG00000009006	GFM1	100	93.935	ENSMFAG00000035731	GFM1	99	92.568	Macaca_fascicularis
ENSCAFG00000009006	GFM1	100	94.083	ENSMMUG00000004961	GFM1	99	92.703	Macaca_mulatta
ENSCAFG00000009006	GFM1	100	93.935	ENSMNEG00000033245	GFM1	99	92.568	Macaca_nemestrina
ENSCAFG00000009006	GFM1	100	91.568	ENSMLEG00000030908	GFM1	100	91.252	Mandrillus_leucophaeus
ENSCAFG00000009006	GFM1	100	81.953	ENSMAMG00000011760	gfm1	98	80.790	Mastacembelus_armatus
ENSCAFG00000009006	GFM1	100	82.249	ENSMZEG00005016639	gfm1	96	82.591	Maylandia_zebra
ENSCAFG00000009006	GFM1	100	82.544	ENSMGAG00000010641	GFM1	97	82.500	Meleagris_gallopavo
ENSCAFG00000009006	GFM1	100	95.266	ENSMAUG00000000611	Gfm1	98	94.038	Mesocricetus_auratus
ENSCAFG00000009006	GFM1	100	94.822	ENSMICG00000049086	GFM1	98	93.496	Microcebus_murinus
ENSCAFG00000009006	GFM1	100	94.231	ENSMOCG00000000465	Gfm1	98	92.818	Microtus_ochrogaster
ENSCAFG00000009006	GFM1	100	80.621	ENSMMOG00000012538	gfm1	97	80.919	Mola_mola
ENSCAFG00000009006	GFM1	100	88.018	ENSMODG00000015673	GFM1	97	87.724	Monodelphis_domestica
ENSCAFG00000009006	GFM1	100	81.213	ENSMALG00000012508	gfm1	98	80.245	Monopterus_albus
ENSCAFG00000009006	GFM1	100	94.083	MGP_CAROLIEiJ_G0025052	Gfm1	98	92.809	Mus_caroli
ENSCAFG00000009006	GFM1	100	94.083	ENSMUSG00000027774	Gfm1	98	92.809	Mus_musculus
ENSCAFG00000009006	GFM1	100	93.935	MGP_PahariEiJ_G0026495	Gfm1	98	92.673	Mus_pahari
ENSCAFG00000009006	GFM1	100	94.083	MGP_SPRETEiJ_G0025994	Gfm1	98	92.809	Mus_spretus
ENSCAFG00000009006	GFM1	100	97.485	ENSMPUG00000002859	GFM1	97	96.712	Mustela_putorius_furo
ENSCAFG00000009006	GFM1	100	94.822	ENSMLUG00000000452	GFM1	98	93.225	Myotis_lucifugus
ENSCAFG00000009006	GFM1	100	93.787	ENSNGAG00000012375	Gfm1	98	91.678	Nannospalax_galili
ENSCAFG00000009006	GFM1	100	81.953	ENSNBRG00000004631	gfm1	98	82.312	Neolamprologus_brichardi
ENSCAFG00000009006	GFM1	100	93.787	ENSNLEG00000004176	GFM1	97	93.562	Nomascus_leucogenys
ENSCAFG00000009006	GFM1	94	78.807	ENSMEUG00000007784	GFM1	100	79.124	Notamacropus_eugenii
ENSCAFG00000009006	GFM1	100	92.751	ENSOPRG00000009860	GFM1	98	92.552	Ochotona_princeps
ENSCAFG00000009006	GFM1	100	93.491	ENSODEG00000004316	GFM1	97	92.371	Octodon_degus
ENSCAFG00000009006	GFM1	100	82.249	ENSONIG00000003772	gfm1	96	82.591	Oreochromis_niloticus
ENSCAFG00000009006	GFM1	100	94.675	ENSOCUG00000013561	GFM1	97	93.597	Oryctolagus_cuniculus
ENSCAFG00000009006	GFM1	100	81.805	ENSORLG00000006487	gfm1	100	82.228	Oryzias_latipes
ENSCAFG00000009006	GFM1	100	81.953	ENSORLG00020003362	gfm1	96	82.173	Oryzias_latipes_hni
ENSCAFG00000009006	GFM1	100	81.509	ENSORLG00015005829	gfm1	96	81.755	Oryzias_latipes_hsok
ENSCAFG00000009006	GFM1	100	82.101	ENSOMEG00000012894	gfm1	96	82.451	Oryzias_melastigma
ENSCAFG00000009006	GFM1	100	93.343	ENSOGAG00000008298	GFM1	98	92.141	Otolemur_garnettii
ENSCAFG00000009006	GFM1	100	94.109	ENSOARG00000002409	GFM1	100	94.093	Ovis_aries
ENSCAFG00000009006	GFM1	100	93.491	ENSPPAG00000033881	GFM1	99	92.183	Pan_paniscus
ENSCAFG00000009006	GFM1	100	96.746	ENSPPRG00000009281	GFM1	98	95.393	Panthera_pardus
ENSCAFG00000009006	GFM1	100	96.598	ENSPTIG00000012416	GFM1	98	95.257	Panthera_tigris_altaica
ENSCAFG00000009006	GFM1	100	93.491	ENSPTRG00000015570	GFM1	99	92.183	Pan_troglodytes
ENSCAFG00000009006	GFM1	100	93.787	ENSPANG00000016512	GFM1	99	92.432	Papio_anubis
ENSCAFG00000009006	GFM1	100	82.249	ENSPKIG00000004876	gfm1	96	82.361	Paramormyrops_kingsleyae
ENSCAFG00000009006	GFM1	100	83.580	ENSPSIG00000012567	GFM1	96	83.844	Pelodiscus_sinensis
ENSCAFG00000009006	GFM1	100	78.466	ENSPMGG00000014068	gfm1	99	79.028	Periophthalmus_magnuspinnatus
ENSCAFG00000009006	GFM1	100	94.675	ENSPEMG00000008942	Gfm1	98	93.496	Peromyscus_maniculatus_bairdii
ENSCAFG00000009006	GFM1	84	86.726	ENSPCIG00000020195	GFM1	95	86.808	Phascolarctos_cinereus
ENSCAFG00000009006	GFM1	100	82.692	ENSPFOG00000011022	gfm1	98	81.744	Poecilia_formosa
ENSCAFG00000009006	GFM1	100	82.396	ENSPLAG00000019585	gfm1	98	80.802	Poecilia_latipinna
ENSCAFG00000009006	GFM1	100	82.544	ENSPMEG00000012376	gfm1	98	81.608	Poecilia_mexicana
ENSCAFG00000009006	GFM1	100	82.249	ENSPREG00000001332	gfm1	93	81.335	Poecilia_reticulata
ENSCAFG00000009006	GFM1	100	93.787	ENSPPYG00000014244	GFM1	99	92.453	Pongo_abelii
ENSCAFG00000009006	GFM1	100	88.757	ENSPCAG00000008934	GFM1	100	89.047	Procavia_capensis
ENSCAFG00000009006	GFM1	100	94.970	ENSPCOG00000022259	GFM1	98	93.767	Propithecus_coquereli
ENSCAFG00000009006	GFM1	100	94.822	ENSPVAG00000013605	GFM1	98	93.496	Pteropus_vampyrus
ENSCAFG00000009006	GFM1	100	81.953	ENSPNYG00000006037	gfm1	97	82.312	Pundamilia_nyererei
ENSCAFG00000009006	GFM1	100	81.953	ENSPNAG00000001237	gfm1	97	82.173	Pygocentrus_nattereri
ENSCAFG00000009006	GFM1	100	94.083	ENSRNOG00000012873	Gfm1	98	92.818	Rattus_norvegicus
ENSCAFG00000009006	GFM1	100	93.787	ENSRBIG00000031363	GFM1	99	92.049	Rhinopithecus_bieti
ENSCAFG00000009006	GFM1	100	93.935	ENSRROG00000031081	GFM1	99	92.183	Rhinopithecus_roxellana
ENSCAFG00000009006	GFM1	98	55.572	YLR069C	-	90	56.835	Saccharomyces_cerevisiae
ENSCAFG00000009006	GFM1	100	93.195	ENSSBOG00000023252	GFM1	99	92.162	Saimiri_boliviensis_boliviensis
ENSCAFG00000009006	GFM1	100	88.757	ENSSHAG00000017772	GFM1	97	88.552	Sarcophilus_harrisii
ENSCAFG00000009006	GFM1	100	81.657	ENSSFOG00015003117	gfm1	99	81.405	Scleropages_formosus
ENSCAFG00000009006	GFM1	100	79.586	ENSSMAG00000013221	gfm1	98	78.610	Scophthalmus_maximus
ENSCAFG00000009006	GFM1	100	80.769	ENSSDUG00000018665	gfm1	98	79.973	Seriola_dumerili
ENSCAFG00000009006	GFM1	100	80.769	ENSSLDG00000020606	gfm1	98	79.973	Seriola_lalandi_dorsalis
ENSCAFG00000009006	GFM1	100	81.657	ENSSPUG00000018686	GFM1	99	80.685	Sphenodon_punctatus
ENSCAFG00000009006	GFM1	100	80.621	ENSSPAG00000008800	gfm1	98	79.837	Stegastes_partitus
ENSCAFG00000009006	GFM1	100	94.822	ENSSSCG00000025651	GFM1	97	93.271	Sus_scrofa
ENSCAFG00000009006	GFM1	100	80.030	ENSTRUG00000009244	gfm1	96	80.362	Takifugu_rubripes
ENSCAFG00000009006	GFM1	100	81.657	ENSTNIG00000007729	gfm1	96	82.033	Tetraodon_nigroviridis
ENSCAFG00000009006	GFM1	99	84.296	ENSTBEG00000017404	GFM1	89	84.296	Tupaia_belangeri
ENSCAFG00000009006	GFM1	100	94.675	ENSTTRG00000001735	GFM1	97	93.496	Tursiops_truncatus
ENSCAFG00000009006	GFM1	100	97.189	ENSUAMG00000026381	GFM1	98	95.664	Ursus_americanus
ENSCAFG00000009006	GFM1	100	97.041	ENSUMAG00000011268	GFM1	98	95.528	Ursus_maritimus
ENSCAFG00000009006	GFM1	100	91.420	ENSVPAG00000009444	GFM1	98	90.515	Vicugna_pacos
ENSCAFG00000009006	GFM1	100	99.556	ENSVVUG00000020091	GFM1	100	99.556	Vulpes_vulpes
ENSCAFG00000009006	GFM1	100	85.207	ENSXETG00000032551	GFM1	97	84.131	Xenopus_tropicalis
ENSCAFG00000009006	GFM1	53	79.798	ENSXCOG00000012590	gfm1	91	79.798	Xiphophorus_couchianus
ENSCAFG00000009006	GFM1	100	82.101	ENSXMAG00000000261	gfm1	98	81.199	Xiphophorus_maculatus