EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000009068 (Gene tree)
Gene ID: 477787
Gene Symbol: EXOSC1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 7398 bases
Position: chr28:10731524-10738921
Accession: 40521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013333	EXOSC1	PF10447.9	5.5e-15	1	1
ENSCAFP00000013333	ECR1_N	PF14382.6	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014417	-	629	XM_534981	ENSCAFP00000013333	207 (aa)	XP_534981	E2RT56

Gene Model

Click here to download ENSCAFG00000009068's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009068	EXOSC1	94	96.923	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSCAFG00000009068	EXOSC1	92	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSCAFG00000009068	EXOSC1	94	99.487	ENSAMEG00000000129	EXOSC1	100	99.487	Ailuropoda_melanoleuca
ENSCAFG00000009068	EXOSC1	91	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSCAFG00000009068	EXOSC1	92	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSCAFG00000009068	EXOSC1	86	70.950	ENSAPEG00000012690	exosc1	96	70.950	Amphiprion_percula
ENSCAFG00000009068	EXOSC1	92	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSCAFG00000009068	EXOSC1	93	85.492	ENSACAG00000002101	EXOSC1	99	85.492	Anolis_carolinensis
ENSCAFG00000009068	EXOSC1	94	98.462	ENSANAG00000034669	EXOSC1	100	98.462	Aotus_nancymaae
ENSCAFG00000009068	EXOSC1	92	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSCAFG00000009068	EXOSC1	92	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSCAFG00000009068	EXOSC1	94	98.974	ENSBTAG00000012699	EXOSC1	100	98.974	Bos_taurus
ENSCAFG00000009068	EXOSC1	86	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSCAFG00000009068	EXOSC1	94	97.949	ENSCJAG00000016586	EXOSC1	100	97.949	Callithrix_jacchus
ENSCAFG00000009068	EXOSC1	100	100.000	ENSCAFG00020006002	EXOSC1	100	100.000	Canis_lupus_dingo
ENSCAFG00000009068	EXOSC1	94	98.974	ENSCHIG00000015253	EXOSC1	100	98.974	Capra_hircus
ENSCAFG00000009068	EXOSC1	94	97.436	ENSTSYG00000000760	EXOSC1	100	97.436	Carlito_syrichta
ENSCAFG00000009068	EXOSC1	94	97.949	ENSCPOG00000001173	EXOSC1	100	97.949	Cavia_porcellus
ENSCAFG00000009068	EXOSC1	94	56.853	ENSCCAG00000023986	EXOSC1	100	56.853	Cebus_capucinus
ENSCAFG00000009068	EXOSC1	94	96.923	ENSCATG00000034114	EXOSC1	100	96.923	Cercocebus_atys
ENSCAFG00000009068	EXOSC1	94	98.462	ENSCLAG00000002463	EXOSC1	100	98.462	Chinchilla_lanigera
ENSCAFG00000009068	EXOSC1	94	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSCAFG00000009068	EXOSC1	90	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSCAFG00000009068	EXOSC1	51	80.189	ENSCPBG00000011949	EXOSC1	88	80.189	Chrysemys_picta_bellii
ENSCAFG00000009068	EXOSC1	90	56.684	ENSCING00000022734	-	89	56.684	Ciona_intestinalis
ENSCAFG00000009068	EXOSC1	90	57.754	ENSCSAVG00000010865	-	95	57.754	Ciona_savignyi
ENSCAFG00000009068	EXOSC1	94	96.923	ENSCANG00000034159	EXOSC1	100	96.923	Colobus_angolensis_palliatus
ENSCAFG00000009068	EXOSC1	94	96.923	ENSCGRG00001000335	Exosc1	100	96.923	Cricetulus_griseus_chok1gshd
ENSCAFG00000009068	EXOSC1	94	96.923	ENSCGRG00000011602	Exosc1	100	96.923	Cricetulus_griseus_crigri
ENSCAFG00000009068	EXOSC1	92	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSCAFG00000009068	EXOSC1	93	76.042	ENSCVAG00000016748	exosc1	99	76.042	Cyprinodon_variegatus
ENSCAFG00000009068	EXOSC1	92	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSCAFG00000009068	EXOSC1	71	97.973	ENSDNOG00000007983	EXOSC1	100	97.973	Dasypus_novemcinctus
ENSCAFG00000009068	EXOSC1	94	97.436	ENSDORG00000016528	Exosc1	100	97.436	Dipodomys_ordii
ENSCAFG00000009068	EXOSC1	89	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSCAFG00000009068	EXOSC1	94	95.385	ENSETEG00000002469	-	100	95.385	Echinops_telfairi
ENSCAFG00000009068	EXOSC1	92	63.731	ENSEBUG00000008164	exosc1	97	63.731	Eptatretus_burgeri
ENSCAFG00000009068	EXOSC1	94	88.718	ENSEASG00005008684	EXOSC1	100	88.718	Equus_asinus_asinus
ENSCAFG00000009068	EXOSC1	57	78.992	ENSECAG00000010621	EXOSC1	71	78.992	Equus_caballus
ENSCAFG00000009068	EXOSC1	94	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSCAFG00000009068	EXOSC1	97	76.119	ENSELUG00000017369	exosc1	88	76.119	Esox_lucius
ENSCAFG00000009068	EXOSC1	100	99.517	ENSFCAG00000040563	EXOSC1	100	99.517	Felis_catus
ENSCAFG00000009068	EXOSC1	94	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSCAFG00000009068	EXOSC1	94	98.462	ENSFDAG00000000846	EXOSC1	100	98.462	Fukomys_damarensis
ENSCAFG00000009068	EXOSC1	92	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSCAFG00000009068	EXOSC1	92	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSCAFG00000009068	EXOSC1	94	72.821	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSCAFG00000009068	EXOSC1	93	76.042	ENSGAFG00000010265	exosc1	94	76.042	Gambusia_affinis
ENSCAFG00000009068	EXOSC1	92	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSCAFG00000009068	EXOSC1	94	84.103	ENSGAGG00000019192	EXOSC1	100	84.103	Gopherus_agassizii
ENSCAFG00000009068	EXOSC1	94	85.128	ENSGGOG00000003099	EXOSC1	100	85.128	Gorilla_gorilla
ENSCAFG00000009068	EXOSC1	92	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSCAFG00000009068	EXOSC1	94	97.949	ENSHGLG00000016927	EXOSC1	100	97.949	Heterocephalus_glaber_female
ENSCAFG00000009068	EXOSC1	94	97.949	ENSHGLG00100012208	EXOSC1	100	97.949	Heterocephalus_glaber_male
ENSCAFG00000009068	EXOSC1	92	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSCAFG00000009068	EXOSC1	92	80.628	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSCAFG00000009068	EXOSC1	59	83.607	ENSSTOG00000029860	-	93	83.607	Ictidomys_tridecemlineatus
ENSCAFG00000009068	EXOSC1	94	99.487	ENSSTOG00000006615	EXOSC1	100	99.487	Ictidomys_tridecemlineatus
ENSCAFG00000009068	EXOSC1	94	98.462	ENSJJAG00000013311	Exosc1	100	98.462	Jaculus_jaculus
ENSCAFG00000009068	EXOSC1	93	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSCAFG00000009068	EXOSC1	92	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSCAFG00000009068	EXOSC1	93	58.081	ENSLOCG00000003776	exosc1	99	58.081	Lepisosteus_oculatus
ENSCAFG00000009068	EXOSC1	94	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSCAFG00000009068	EXOSC1	94	96.923	ENSMFAG00000001493	EXOSC1	100	96.923	Macaca_fascicularis
ENSCAFG00000009068	EXOSC1	100	92.891	ENSMMUG00000020028	EXOSC1	100	92.891	Macaca_mulatta
ENSCAFG00000009068	EXOSC1	94	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSCAFG00000009068	EXOSC1	94	91.282	ENSMLEG00000027643	EXOSC1	100	91.282	Mandrillus_leucophaeus
ENSCAFG00000009068	EXOSC1	93	80.208	ENSMAMG00000012200	exosc1	99	80.208	Mastacembelus_armatus
ENSCAFG00000009068	EXOSC1	92	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSCAFG00000009068	EXOSC1	94	85.641	ENSMAUG00000020462	-	100	85.641	Mesocricetus_auratus
ENSCAFG00000009068	EXOSC1	100	94.313	ENSMICG00000007664	EXOSC1	100	94.313	Microcebus_murinus
ENSCAFG00000009068	EXOSC1	94	96.923	ENSMOCG00000006004	-	100	96.923	Microtus_ochrogaster
ENSCAFG00000009068	EXOSC1	91	90.526	ENSMOCG00000017124	-	97	90.526	Microtus_ochrogaster
ENSCAFG00000009068	EXOSC1	94	60.309	ENSMMOG00000021403	exosc1	99	60.309	Mola_mola
ENSCAFG00000009068	EXOSC1	94	92.857	ENSMODG00000004213	EXOSC1	100	92.857	Monodelphis_domestica
ENSCAFG00000009068	EXOSC1	89	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSCAFG00000009068	EXOSC1	94	96.410	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.410	Mus_caroli
ENSCAFG00000009068	EXOSC1	94	95.897	ENSMUSG00000034321	Exosc1	100	95.897	Mus_musculus
ENSCAFG00000009068	EXOSC1	94	96.923	MGP_PahariEiJ_G0014449	Exosc1	100	96.923	Mus_pahari
ENSCAFG00000009068	EXOSC1	94	96.410	MGP_SPRETEiJ_G0023880	Exosc1	100	96.410	Mus_spretus
ENSCAFG00000009068	EXOSC1	94	99.487	ENSMPUG00000017044	EXOSC1	100	99.487	Mustela_putorius_furo
ENSCAFG00000009068	EXOSC1	94	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSCAFG00000009068	EXOSC1	94	95.897	ENSNGAG00000022033	Exosc1	100	95.897	Nannospalax_galili
ENSCAFG00000009068	EXOSC1	93	60.417	ENSNBRG00000024007	exosc1	98	60.417	Neolamprologus_brichardi
ENSCAFG00000009068	EXOSC1	94	96.410	ENSNLEG00000013872	EXOSC1	100	96.410	Nomascus_leucogenys
ENSCAFG00000009068	EXOSC1	56	91.304	ENSMEUG00000002246	EXOSC1	100	91.304	Notamacropus_eugenii
ENSCAFG00000009068	EXOSC1	94	96.410	ENSOPRG00000005065	EXOSC1	100	96.410	Ochotona_princeps
ENSCAFG00000009068	EXOSC1	94	97.949	ENSODEG00000016709	EXOSC1	100	97.949	Octodon_degus
ENSCAFG00000009068	EXOSC1	92	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSCAFG00000009068	EXOSC1	56	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSCAFG00000009068	EXOSC1	94	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSCAFG00000009068	EXOSC1	94	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSCAFG00000009068	EXOSC1	92	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSCAFG00000009068	EXOSC1	92	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSCAFG00000009068	EXOSC1	92	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSCAFG00000009068	EXOSC1	92	63.351	ENSOMEG00000013907	exosc1	98	63.351	Oryzias_melastigma
ENSCAFG00000009068	EXOSC1	94	97.436	ENSOGAG00000016259	EXOSC1	100	97.436	Otolemur_garnettii
ENSCAFG00000009068	EXOSC1	100	96.135	ENSOARG00000010136	EXOSC1	100	98.462	Ovis_aries
ENSCAFG00000009068	EXOSC1	94	90.863	ENSPPAG00000039842	EXOSC1	100	90.863	Pan_paniscus
ENSCAFG00000009068	EXOSC1	94	99.487	ENSPPRG00000023366	EXOSC1	100	99.487	Panthera_pardus
ENSCAFG00000009068	EXOSC1	94	99.487	ENSPTIG00000017701	EXOSC1	100	99.487	Panthera_tigris_altaica
ENSCAFG00000009068	EXOSC1	94	96.923	ENSPTRG00000002808	EXOSC1	100	96.923	Pan_troglodytes
ENSCAFG00000009068	EXOSC1	94	96.923	ENSPANG00000021324	EXOSC1	100	96.923	Papio_anubis
ENSCAFG00000009068	EXOSC1	92	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSCAFG00000009068	EXOSC1	71	80.822	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSCAFG00000009068	EXOSC1	92	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSCAFG00000009068	EXOSC1	94	96.923	ENSPEMG00000010710	-	100	96.923	Peromyscus_maniculatus_bairdii
ENSCAFG00000009068	EXOSC1	90	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSCAFG00000009068	EXOSC1	94	93.846	ENSPCIG00000002210	EXOSC1	99	93.846	Phascolarctos_cinereus
ENSCAFG00000009068	EXOSC1	93	75.521	ENSPFOG00000006755	exosc1	94	75.521	Poecilia_formosa
ENSCAFG00000009068	EXOSC1	93	75.521	ENSPLAG00000005880	exosc1	99	75.521	Poecilia_latipinna
ENSCAFG00000009068	EXOSC1	93	75.521	ENSPMEG00000015598	exosc1	94	75.521	Poecilia_mexicana
ENSCAFG00000009068	EXOSC1	93	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSCAFG00000009068	EXOSC1	94	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSCAFG00000009068	EXOSC1	94	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSCAFG00000009068	EXOSC1	94	91.795	ENSPCOG00000027539	EXOSC1	100	91.795	Propithecus_coquereli
ENSCAFG00000009068	EXOSC1	94	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSCAFG00000009068	EXOSC1	92	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSCAFG00000009068	EXOSC1	92	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSCAFG00000009068	EXOSC1	94	96.923	ENSRNOG00000048708	Exosc1	100	96.923	Rattus_norvegicus
ENSCAFG00000009068	EXOSC1	94	96.923	ENSRBIG00000035618	EXOSC1	100	96.923	Rhinopithecus_bieti
ENSCAFG00000009068	EXOSC1	100	93.365	ENSRROG00000032589	EXOSC1	100	93.365	Rhinopithecus_roxellana
ENSCAFG00000009068	EXOSC1	94	98.462	ENSSBOG00000000359	EXOSC1	100	98.462	Saimiri_boliviensis_boliviensis
ENSCAFG00000009068	EXOSC1	71	96.599	ENSSHAG00000018219	EXOSC1	100	96.599	Sarcophilus_harrisii
ENSCAFG00000009068	EXOSC1	93	82.292	ENSSFOG00015009069	exosc1	99	82.292	Scleropages_formosus
ENSCAFG00000009068	EXOSC1	92	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSCAFG00000009068	EXOSC1	92	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSCAFG00000009068	EXOSC1	92	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSCAFG00000009068	EXOSC1	92	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSCAFG00000009068	EXOSC1	94	84.615	ENSSARG00000000162	EXOSC1	100	84.615	Sorex_araneus
ENSCAFG00000009068	EXOSC1	94	82.474	ENSSPUG00000012263	EXOSC1	99	82.474	Sphenodon_punctatus
ENSCAFG00000009068	EXOSC1	92	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSCAFG00000009068	EXOSC1	95	98.477	ENSSSCG00000010518	EXOSC1	92	98.477	Sus_scrofa
ENSCAFG00000009068	EXOSC1	93	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSCAFG00000009068	EXOSC1	91	74.074	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSCAFG00000009068	EXOSC1	91	73.958	ENSTNIG00000014079	exosc1	97	73.958	Tetraodon_nigroviridis
ENSCAFG00000009068	EXOSC1	94	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSCAFG00000009068	EXOSC1	89	98.913	ENSTTRG00000009887	EXOSC1	100	98.913	Tursiops_truncatus
ENSCAFG00000009068	EXOSC1	94	82.564	ENSUAMG00000010266	EXOSC1	100	82.564	Ursus_americanus
ENSCAFG00000009068	EXOSC1	94	82.564	ENSUMAG00000022002	EXOSC1	100	82.564	Ursus_maritimus
ENSCAFG00000009068	EXOSC1	100	100.000	ENSVVUG00000023192	EXOSC1	67	100.000	Vulpes_vulpes
ENSCAFG00000009068	EXOSC1	93	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSCAFG00000009068	EXOSC1	58	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSCAFG00000009068	EXOSC1	93	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus